Virus and Other Infection-associated Cancers Recent Publications

Chiale C, Moshkani S, Rose JK, Robek MD: Heterologous prime-boost immunization with vesiculovirus-based vectors expressing HBV Core antigen induces CD8+ T cell responses in naïve and persistently infected mice and protects from challenge. Antiviral Res. 2019 Aug; 2019 May 30. PMID: 31153968

Williams EC, McGinnis KA, Tate JP, Matson TE, Rubinsky AD, Bobb JF, Lapham GT, Edelman EJ, Catz SL, Satre DD, Bryant KJ, Marshall BDL, Kraemer KL, Bensley KM, Richards JE, Skanderson M, Justice AC, Fiellin DA, Bradley KA: HIV Disease Severity Is Sensitive to Temporal Changes in Alcohol Use: A National Study of VA Patients With HIV. J Acquir Immune Defic Syndr. 2019 Aug 1. PMID: 30973541

Li H, Torabi SJ, Park HS, Yarbrough WG, Mehra S, Choi R, Judson BL: Clinical value of transoral robotic surgery: Nationwide results from the first 5 years of adoption. Laryngoscope. 2019 Aug; 2018 Dec 21. PMID: 30575965

Hayes RJ, Donnell D, Floyd S, Mandla N, Bwalya J, Sabapathy K, Yang B, Phiri M, Schaap A, Eshleman SH, Piwowar-Manning E, Kosloff B, James A, Skalland T, Wilson E, Emel L, Macleod D, Dunbar R, Simwinga M, Makola N, Bond V, Hoddinott G, Moore A, Griffith S, Deshmane Sista N, Vermund SH, El-Sadr W, Burns DN, Hargreaves JR, Hauck K, Fraser C, Shanaube K, Bock P, Beyers N, Ayles H, Fidler S, HPTN 071 (PopART) Study Team.: Effect of Universal Testing and Treatment on HIV Incidence - HPTN 071 (PopART). N Engl J Med. 2019 Jul 18. PMID: 31314965

Rentsch CT, Edelman EJ, Justice AC, Marshall BDL, Xu K, Smith AH, Crystal S, Gaither JR, Gordon AJ, Smith RV, Kember RL, Polimanti R, Gelernter J, Fiellin DA, Tate JP, Kranzler HR, Becker WC, VACS Project Team.: Patterns and Correlates of Prescription Opioid Receipt Among US Veterans: A National, 18-Year Observational Cohort Study. AIDS Behav. 2019 Jul 17; 2019 Jul 17. PMID: 31317364

Vermund SH: Use of big data to identify risk of adverse HIV outcomes. Lancet HIV. 2019 Jul 11; 2019 Jul 11. PMID: 31303556

Ruff WE, Dehner C, Kim WJ, Pagovich O, Aguiar CL, Yu AT, Roth AS, Vieira SM, Kriegel C, Adeniyi O, Mulla MJ, Abrahams VM, Kwok WW, Nussinov R, Erkan D, Goodman AL, Kriegel MA: Pathogenic Autoreactive T and B Cells Cross-React with Mimotopes Expressed by a Common Human Gut Commensal to Trigger Autoimmunity. Cell Host Microbe. 2019 Jul 10; 2019 Jun 18. PMID: 31227334

Federman RS, Boguraev AS, Heim EN, DiMaio D: Biologically Active Ultra-Simple Proteins Reveal Principles of Transmembrane Domain Interactions. J Mol Biol. 2019 Jul 10; 2019 Jul 10. PMID: 31301406

Pan C, Izreig S, Yarbrough WG, Issaeva N: NSD1 mutations by HPV status in head and neck cancer: differences in survival and response to DNA-damaging agents. Cancers Head Neck. 2019; 2019 Jul 8. PMID: 31321084

Uchil PD, Haugh KA, Pi R, Mothes W: In vivo Imaging-Driven Approaches to Study Virus Dissemination and Pathogenesis. Annu Rev Virol. 2019 Jul 5; 2019 Jul 5. PMID: 31283440

Jeon Y, Benedict M, Taddei T, Jain D, Zhang X: Macrotrabecular Hepatocellular Carcinoma: An Aggressive Subtype of Hepatocellular Carcinoma. Am J Surg Pathol. 2019 Jul. PMID: 31135484

Kudalkar SN, Ullah I, Bertoletti N, Mandl HK, Cisneros JA, Beloor J, Chan AH, Quijano E, Saltzman WM, Jorgensen WL, Kumar P, Anderson KS: Structural and pharmacological evaluation of a novel non-nucleoside reverse transcriptase inhibitor as a promising long acting nanoformulation for treating HIV. Antiviral Res. 2019 Jul; 2019 Apr 26. PMID: 31034849

Mahmud N, John B, Taddei TH, Goldberg DS: Pre-transplant alpha-fetoprotein is associated with post-transplant hepatocellular carcinoma recurrence mortality. Clin Transplant. 2019 Jul; 2019 Jun 25. PMID: 31177570

Osborn HA, Goldsmith TA, Varvares MA: Assessing functional outcomes in head and neck surgical oncology. Head Neck. 2019 Jul; 2019 Jan 30. PMID: 30698897

Justice AC, Akgün KM: What Does Aging with HIV Mean for Nursing Homes? J Am Geriatr Soc. 2019 Jul; 2019 May 7. PMID: 31063666

Allen TM, Brehm MA, Bridges S, Ferguson S, Kumar P, Mirochnitchenko O, Palucka K, Pelanda R, Sanders-Beer B, Shultz LD, Su L, PrabhuDas M: Humanized immune system mouse models: progress, challenges and opportunities. Nat Immunol. 2019 Jul. PMID: 31160798

Gibani MM, Jones E, Barton A, Jin C, Meek J, Camara S, Galal U, Heinz E, Rosenberg-Hasson Y, Obermoser G, Jones C, Campbell D, Black C, Thomaides-Brears H, Darlow C, Dold C, Silva-Reyes L, Blackwell L, Lara-Tejero M, Jiao X, Stack G, Blohmke CJ, Hill J, Angus B, Dougan G, Galán J, Pollard AJ: Investigation of the role of typhoid toxin in acute typhoid fever in a human challenge model. Nat Med. 2019 Jul; 2019 Jul 3. PMID: 31270506

Oh JE, Iijima N, Song E, Lu P, Klein J, Jiang R, Kleinstein SH, Iwasaki A: Migrant memory B cells secrete luminal antibody in the vagina. Nature. 2019 Jul; 2019 Jun 12. PMID: 31189952

Benchetrit L, Torabi SJ, Tate JP, Mehra S, Osborn HA, Young MR, Burtness B, Judson BL: Gender disparities in head and neck cancer chemotherapy clinical trials participation and treatment. Oral Oncol. 2019 Jul; 2019 May 14. PMID: 31178210

Guo EZ, Desrosiers DC, Zalesak J, Tolchard J, Berbon M, Habenstein B, Marlovits T, Loquet A, Galán JE: A polymorphic helix of a Salmonella needle protein relays signals defining distinct steps in type III secretion. PLoS Biol. 2019 Jul; 2019 Jul 1. PMID: 31260457

Weber E, Buzovetsky O, Heston L, Yu KP, Knecht KM, El-Guindy A, Miller G, Xiong Y: A Noncanonical Basic Motif of Epstein-Barr Virus ZEBRA Protein Facilitates Recognition of Methylated DNA, High-Affinity DNA Binding, and Lytic Activation. J Virol. 2019 Jul 15; 2019 Jun 28. PMID: 31068430

Godri Pollitt KJ, Kim JH, Peccia J, Elimelech M, Zhang Y, Charkoftaki G, Hodges B, Zucker I, Huang H, Deziel NC, Murphy K, Ishii M, Johnson CH, Boissevain A, O'Keefe E, Anastas PT, Orlicky D, Thompson DC, Vasiliou V: 1,4-Dioxane as an emerging water contaminant: State of the science and evaluation of research needs. Sci Total Environ. 2019 Jun 28; 2019 Jun 28. PMID: 31302550

Mahmud N, Kaplan DE, Taddei TH, Goldberg DS: Reply to Letters to the Editor: Diverging Definitions and Dividing Lines in Acute-on-Chronic Liver Failure. Hepatology. 2019 Jun 27; 2019 Jun 27. PMID: 31243784

Hanna J, Brauer PR, Morse E, Judson B, Mehra S: Is robotic surgery an option for early T-stage laryngeal cancer? Early nationwide results. Laryngoscope. 2019 Jun 24; 2019 Jun 24. PMID: 31233223

He L, Cohen EB, Edwards APB, Xavier-Ferrucio J, Bugge K, Federman RS, Absher D, Myers RM, Kragelund BB, Krause DS, DiMaio D: Transmembrane Protein Aptamer Induces Cooperative Signaling by the EPO Receptor and the Cytokine Receptor β-Common Subunit. iScience. 2019 Jun 21; 2019 Jun 21. PMID: 31279934

Howell M, Dumitrescu DG, Blankenship LR, Herkert D, Hatzios SK: Functional characterization of a subtilisin-like serine protease from Vibrio cholerae. J Biol Chem. 2019 Jun 21; 2019 May 10. PMID: 31076508

Blanco-Centurion C, Luo S, Spergel DJ, Vidal-Ortiz A, Oprisan SA, Van den Pol AN, Liu M, Shiromani PJ: Dynamic Network Activation of Hypothalamic MCH Neurons in REM Sleep and Exploratory Behavior. J Neurosci. 2019 Jun 19; 2019 Apr 29. PMID: 31036764

McKellar MS, Kuchibhatla MN, Oursler KAK, Crystal S, Akgün KM, Crothers K, Gibert CL, Nieves-Lugo K, Womack J, Tate JP, Fillenbaum GG: Racial Differences in Change in Physical Functioning in Older Male Veterans with HIV. AIDS Res Hum Retroviruses. 2019 Jun 18; 2019 Jun 18. PMID: 30963773

Fritzlar S, Aktepe TE, Chao YW, Kenney ND, McAllaster MR, Wilen CB, White PA, Mackenzie JM: Mouse Norovirus Infection Arrests Host Cell Translation Uncoupled from the Stress Granule-PKR-eIF2α Axis. MBio. 2019 Jun 18; 2019 Jun 18. PMID: 31213553

Lee NCJ, Kelly JR, An Y, Park HS, Judson BL, Burtness BA, Husain ZA: Radiation therapy treatment facility and overall survival in the adjuvant setting for locally advanced head and neck squamous cell carcinoma. Cancer. 2019 Jun 15; 2019 Feb 12. PMID: 30748002

Caniglia EC, Robins JM, Cain LE, Sabin C, Logan R, Abgrall S, Mugavero MJ, Hernández-Díaz S, Meyer L, Seng R, Drozd DR, Seage Iii GR, Bonnet F, Le Marec F, Moore RD, Reiss P, van Sighem A, Mathews WC, Jarrín I, Alejos B, Deeks SG, Muga R, Boswell SL, Ferrer E, Eron JJ, Gill J, Pacheco A, Grinsztejn B, Napravnik S, Jose S, Phillips A, Justice A, Tate J, Bucher HC, Egger M, Furrer H, Miro JM, Casabona J, Porter K, Touloumi G, Crane H, Costagliola D, Saag M, Hernán MA: Emulating a trial of joint dynamic strategies: An application to monitoring and treatment of HIV-positive individuals. Stat Med. 2019 Jun 15; 2019 Mar 18. PMID: 30883859

Torabi SJ, Benchetrit L, Kuo Yu P, Cheraghlou S, Savoca EL, Tate JP, Judson BL: Prognostic Case Volume Thresholds in Patients With Head and Neck Squamous Cell Carcinoma. JAMA Otolaryngol Head Neck Surg. 2019 Jun 13; 2019 Jun 13. PMID: 31194229

Lee S, Liu H, Wilen CB, Sychev ZE, Desai C, Hykes BL Jr, Orchard RC, McCune BT, Kim KW, Nice TJ, Handley SA, Baldridge MT, Amarasinghe GK, Virgin HW: A Secreted Viral Nonstructural Protein Determines Intestinal Norovirus Pathogenesis. Cell Host Microbe. 2019 Jun 12; 2019 May 23. PMID: 31130511

Li X, Kozlov SV, El-Guindy A, Bhaduri-McIntosh S: Retrograde regulation by the viral protein kinase epigenetically sustains the EBV latency-to-lytic switch to augment virus production. J Virol. 2019 Jun 12; 2019 Jun 12. PMID: 31189703

Zhu S, Schniederberend M, Zhitnitsky D, Jain R, Galán JE, Kazmierczak BI, Liu J: In Situ Structures of Polar and Lateral Flagella Revealed by Cryo-Electron Tomography. J Bacteriol. 2019 Jul 1; 2019 Jun 10. PMID: 31010901

Aliyu MH, Sam-Agudu NA, Shenoi S, Goga AE, Ramraj T, Vermund SH, Audet CM: Increasing male engagement in the prevention of vertical transmission of HIV: what works in sub-Saharan Africa? BMJ. 2019 Jun 6; 2019 Jun 6. PMID: 31171558

Benchetrit L, Morse E, Judson BL, Mehra S: Positive Surgical Margins in Submandibular Malignancies: Facility and Practice Variation. Otolaryngol Head Neck Surg. 2019 Jun 4; 2019 Jun 4. PMID: 31159649

Bade BC, DeRycke EC, Ramsey C, Skanderson M, Crothers K, Haskell S, Bean-Mayberry B, Brandt C, Bastian LA, Akgün KM: Sex Differences in Veterans Admitted to the Hospital for Chronic Obstructive Pulmonary Disease Exacerbation. Ann Am Thorac Soc. 2019 Jun. PMID: 30822098

Lee JW, Parameswaran J, Sandoval-Schaefer T, Eoh KJ, Yang DH, Zhu F, Mehra R, Sharma R, Gaffney SG, Perry EB, Townsend JP, Serebriiskii IG, Golemis EA, Issaeva N, Yarbrough WG, Koo JS, Burtness B: Combined Aurora Kinase A (AURKA) and WEE1 Inhibition Demonstrates Synergistic Antitumor Effect in Squamous Cell Carcinoma of the Head and Neck. Clin Cancer Res. 2019 Jun 1; 2019 Feb 12. PMID: 30755439

Zhang C, Penson DF, Qian HZ, Webb GF, Lou J, Shephard BE, Liu Y, Vermund SH: Modeling economic and epidemiological impact of voluntary medical male circumcision among men who have sex with men in Beijing, China. Int J STD AIDS. 2019 Jun; 2019 Mar 19. PMID: 30890118

Liu Y, Silenzio VMB, Nash R, Luther P, Bauermeister J, Vermund SH, Zhang C: Suboptimal Recent and Regular HIV Testing Among Black Men Who Have Sex With Men in the United States: Implications From a Meta-Analysis. J Acquir Immune Defic Syndr. 2019 Jun 1. PMID: 30844996

Bensley KM, McGinnis KA, Fortney J, Chan KCG, Dombrowski JC, Ornelas I, Edelman EJ, Goulet JL, Satre DD, Justice AC, Fiellin DA, Williams EC: Patterns of Alcohol Use Among Patients Living With HIV in Urban, Large Rural, and Small Rural Areas. J Rural Health. 2019 Jun; 2018 Oct 19. PMID: 30339740

Lee JW, Zhang Y, Eoh KJ, Sharma R, Sanmamed MF, Wu J, Choi J, Park HS, Iwasaki A, Kaftan E, Chen L, Papadimitrakopoulou V, Herbst RS, Koo JS: The Combination of MEK Inhibitor With Immunomodulatory Antibodies Targeting Programmed Death 1 and Programmed Death Ligand 1 Results in Prolonged Survival in Kras/p53-Driven Lung Cancer. J Thorac Oncol. 2019 Jun; 2019 Feb 13. PMID: 30771521

Wang EA, Long JB, McGinnis KA, Wang KH, Wildeman CJ, Kim C, Bucklen KB, Fiellin DA, Bates J, Brandt C, Justice AC: Measuring Exposure to Incarceration Using the Electronic Health Record. Med Care. 2019 Jun. PMID: 31095055

Uraki R, Hastings AK, Marin-Lopez A, Sumida T, Takahashi T, Grover JR, Iwasaki A, Hafler DA, Montgomery RR, Fikrig E: Aedes aegypti AgBR1 antibodies modulate early Zika virus infection of mice. Nat Microbiol. 2019 Jun; 2019 Mar 11. PMID: 30858571

Zimmermann M, Zimmermann-Kogadeeva M, Wegmann R, Goodman AL: Mapping human microbiome drug metabolism by gut bacteria and their genes. Nature. 2019 Jun; 2019 Jun 3. PMID: 31158845

Wu H, Xiu C, Fu X, Li M, Wang Z, Li X, Wu J, Vermund SH, Hu Y: Syphilis associated with recreational drug use, depression and high-risk sexual behaviour in men who have sex with men: a case-control study in China. Sex Transm Infect. 2019 Jun; 2019 Mar 6. PMID: 30842346

Song E, Iwasaki A: Monocytes Inadequately Fill In for Meningeal Macrophages. Trends Immunol. 2019 Jun; 2019 May 6. PMID: 31072686

Graziano VR, Wei J, Wilen CB: Norovirus Attachment and Entry. Viruses. 2019 May 30; 2019 May 30. PMID: 31151248

Kudo E, Song E, Yockey LJ, Rakib T, Wong PW, Homer RJ, Iwasaki A: Low ambient humidity impairs barrier function and innate resistance against influenza infection. Proc Natl Acad Sci U S A. 2019 May 28; 2019 May 13. PMID: 31085641

DiMaio D: Small size, big impact: how studies of small DNA tumour viruses revolutionized biology. Philos Trans R Soc Lond B Biol Sci. 2019 May 27. PMID: 30955494

Mathur R, Hui Q, Huang Y, Gwinn M, So-Armah K, Freiberg MS, Justice AC, Xu K, Marconi VC, Sun YV: DNA Methylation Markers of Type 2 Diabetes Mellitus Among Male Veterans With or Without Human Immunodeficiency Virus Infection. J Infect Dis. 2019 May 24. PMID: 30649532

Serper M, Kaplan DE, Shults J, Reese PP, Beste LA, Taddei TH, Werner RM: Quality Measures, All-Cause Mortality, and Health Care Use in a National Cohort of Veterans With Cirrhosis. Hepatology. 2019 May 20; 2019 May 20. PMID: 31107967

Edelman EJ, Maisto SA, Hansen NB, Cutter CJ, Dziura J, Deng Y, Fiellin LE, O'Connor PG, Bedimo R, Gibert CL, Marconi VC, Rimland D, Rodriguez-Barradas MC, Simberkoff MS, Tate JP, Justice AC, Bryant KJ, Fiellin DA: Integrated stepped alcohol treatment for patients with HIV and alcohol use disorder: a randomised controlled trial. Lancet HIV. 2019 May 17; 2019 May 17. PMID: 31109915

Kranzler HR, Zhou H, Kember RL, Smith RV, Justice AC, Damrauer S, Tsao PS, Klarin D, Baras A, Reid J, Overton J, Rader DJ, Cheng Z, Tate JP, Becker WC, Concato J, Xu K, Polimanti R, Zhao H, Gelernter J: Author Correction: Genome-wide association study of alcohol consumption and use disorder in 274,424 individuals from multiple populations. Nat Commun. 2019 May 17; 2019 May 17. PMID: 31101824

Chen H, Nwe PK, Yang Y, Rosen CE, Bielecka AA, Kuchroo M, Cline GW, Kruse AC, Ring AM, Crawford JM, Palm NW: A Forward Chemical Genetic Screen Reveals Gut Microbiota Metabolites That Modulate Host Physiology. Cell. 2019 May 16; 2019 Apr 18. PMID: 31006530

Anand SP, Grover JR, Tolbert WD, Prévost J, Richard J, Ding S, Baril S, Medjahed H, Evans DT, Pazgier M, Mothes W, Finzi A: Antibody-Induced Internalization of HIV-1 Env Proteins Limits Surface Expression of the Closed Conformation of Env. J Virol. 2019 Jun 1; 2019 May 15. PMID: 30894474

Smaga SS, Xu C, Summers BJ, Digianantonio KM, Perilla JR, Xiong Y: MxB Restricts HIV-1 by Targeting the Tri-hexamer Interface of the Viral Capsid. Structure. 2019 May 10; 2019 May 10. PMID: 31155311

Lodi S, Phillips A, Lundgren J, Logan R, Sharma S, Cole SR, Babiker A, Law M, Chu H, Byrne D, Horban A, Sterne JAC, Porter K, Sabin C, Costagliola D, Abgrall S, Gill J, Touloumi G, Pacheco AG, van Sighem A, Reiss P, Bucher HC, Montoliu Giménez A, Jarrin I, Wittkop L, Meyer L, Perez-Hoyos S, Justice A, Neaton JD, Hernán MA, INSIGHT START Study Group and the HIV-CAUSAL Collaboration.: Effect estimates in randomized trials and observational studies: comparing apples with apples. Am J Epidemiol. 2019 May 7; 2019 May 7. PMID: 31063192

Hanna J, Morse E, Brauer PR, Judson B, Mehra S: Positive margin rates and predictors in transoral robotic surgery after federal approval: A national quality study. Head Neck. 2019 May 6; 2019 May 6. PMID: 31058417

Hernández-Ramírez RU, Qin L, Lin H, Leyden W, Neugebauer RS, Althoff KN, Hessol NA, Achenbach CJ, Brooks JT, Gill MJ, Grover S, Horberg MA, Li J, Mathews WC, Mayor AM, Patel P, Rabkin CS, Rachlis A, Justice AC, Moore RD, Engels EA, Silverberg MJ, Dubrow R, North American AIDS Cohort Collaboration on Research and Design of the International Epidemiologic Databases to Evaluate AIDS.: Association of immunosuppression and HIV viremia with anal cancer risk in persons living with HIV in the United States and Canada. Clin Infect Dis. 2019 May 2; 2019 May 2. PMID: 31044245

Knudson A, Shaw S, Yin L, Xiao D, Qian HZ, Sullivan S, Liu H, Ruan Y, Shao Y, Vermund SH, Amico KR: Exploration of Implementation Patterns and Content from a Text-Based Outreach Intervention Clinical Trial for Newly Diagnosed, HIV-Positive MSM in Beijing, China. AIDS Behav. 2019 May. PMID: 30288683

Wyse JJ, Robbins JL, McGinnis KA, Edelman EJ, Gordon AJ, Manhapra A, Fiellin DA, Moore BA, Korthuis PT, Gaither JR, Gordon K, Skanderson M, Barry DT, Crystal S, Justice A, Kraemer KL: Predictors of timely opioid agonist treatment initiation among veterans with and without HIV. Drug Alcohol Depend. 2019 May 1; 2019 Mar 9. PMID: 30878769

Mahmud N, Kaplan DE, Taddei TH, Goldberg DS: Incidence and Mortality of Acute-on-Chronic Liver Failure Using Two Definitions in Patients with Compensated Cirrhosis. Hepatology. 2019 May; 2019 Mar 20. PMID: 30615211

Zhang Y, Cheng TC, Huang G, Lu Q, Surleac MD, Mandell JD, Pontarotti P, Petrescu AJ, Xu A, Xiong Y, Schatz DG: Transposon molecular domestication and the evolution of the RAG recombinase. Nature. 2019 May; 2019 Apr 10. PMID: 30971819

Cannataro VL, Gaffney SG, Sasaki T, Issaeva N, Grewal NKS, Grandis JR, Yarbrough WG, Burtness B, Anderson KS, Townsend JP: APOBEC-induced mutations and their cancer effect size in head and neck squamous cell carcinoma. Oncogene. 2019 May; 2019 Jan 15. PMID: 30647454

Torabi SJ, Benchetrit L, Spock T, Cheraghlou S, Judson BL: Clinically node-negative head and neck mucosal melanoma: An analysis of current treatment guidelines & outcomes. Oral Oncol. 2019 May; 2019 Mar 28. PMID: 31010627

Morse E, Henderson C, Carafeno T, Dibble J, Longley P, Chan E, Judson B, Yarbrough WG, Sasaki C, Mehra S: A Clinical Care Pathway to Reduce ICU Usage in Head and Neck Microvascular Reconstruction. Otolaryngol Head Neck Surg. 2019 May; 2018 Jul 31. PMID: 30060705

Withers JB, Mondol V, Pawlica P, Rosa-Mercado NA, Tycowski KT, Ghasempur S, Torabi SF, Steitz JA: Idiosyncrasies of Viral Noncoding RNAs Provide Insights into Host Cell Biology. Annu Rev Virol. 2019 Apr 30; 2019 Apr 30. PMID: 31039329

Kim DJ, Iwasaki A: YTHDF1 Control of Dendritic Cell Cross-Priming as a Possible Target of Cancer Immunotherapy. Biochemistry. 2019 Apr 16; 2019 Apr 3. PMID: 30943019

Torgersen J, So-Armah K, Freiberg MS, Goetz MB, Budoff MJ, Lim JK, Taddei T, Butt AA, Rodriguez-Barradas MC, Justice AC, Kostman JR, Lo Re V 3rd: Comparison of the prevalence, severity, and risk factors for hepatic steatosis in HIV-infected and uninfected people. BMC Gastroenterol. 2019 Apr 15; 2019 Apr 15. PMID: 30987601

Alsahafi N, Bakouche N, Kazemi M, Richard J, Ding S, Bhattacharyya S, Das D, Anand SP, Prévost J, Tolbert WD, Lu H, Medjahed H, Gendron-Lepage G, Ortega Delgado GG, Kirk S, Melillo B, Mothes W, Sodroski J, Smith AB 3rd, Kaufmann DE, Wu X, Pazgier M, Rouiller I, Finzi A, Munro JB: An Asymmetric Opening of HIV-1 Envelope Mediates Antibody-Dependent Cellular Cytotoxicity. Cell Host Microbe. 2019 Apr 10. PMID: 30974085

Gonzalo-Gil E, Rapuano PB, Ikediobi U, Leibowitz R, Mehta S, Coskun AK, Porterfield JZ, Lampkin TD, Marconi VC, Rimland D, Walker BD, Deeks S, Sutton RE: Transcriptional down-regulation of ccr5 in a subset of HIV+ controllers and their family members. Elife. 2019 Apr 9; 2019 Apr 9. PMID: 30964004

Tavares RCA, Pyle AM, Somarowthu S: Phylogenetic Analysis with Improved Parameters Reveals Conservation in lncRNA Structures. J Mol Biol. 2019 Apr 5; 2019 Mar 16. PMID: 30890332

Chang SJ, Jin SC, Jiao X, Galán JE: Unique features in the intracellular transport of typhoid toxin revealed by a genome-wide screen. PLoS Pathog. 2019 Apr; 2019 Apr 5. PMID: 30951565

Kranzler HR, Zhou H, Kember RL, Vickers Smith R, Justice AC, Damrauer S, Tsao PS, Klarin D, Baras A, Reid J, Overton J, Rader DJ, Cheng Z, Tate JP, Becker WC, Concato J, Xu K, Polimanti R, Zhao H, Gelernter J: Genome-wide association study of alcohol consumption and use disorder in 274,424 individuals from multiple populations. Nat Commun. 2019 Apr 2; 2019 Apr 2. PMID: 30940813

Saffo S, Taddei TH: Systemic Management for Advanced Hepatocellular Carcinoma: A Review of the Molecular Pathways of Carcinogenesis, Current and Emerging Therapies, and Novel Treatment Strategies. Dig Dis Sci. 2019 Apr. PMID: 30887150

Wang J, Sun D, Abudusaimaiti X, Vermund SH, Li D, Hu Y: Low awareness of influenza vaccination among pregnant women and their obstetricians: a population-based survey in Beijing, China. Hum Vaccin Immunother. 2019 Apr 1; 2019 Apr 1. PMID: 30932729

Hernández-Ramírez RU, Qin L, Lin H, Leyden W, Neugebauer RS, Althoff KN, Achenbach CJ, Hessol NA, D'Souza G, Gebo KA, Gill MJ, Grover S, Horberg MA, Li J, Mathews WC, Mayor AM, Park LS, Rabkin CS, Salters K, Justice AC, Moore RD, Engels EA, Silverberg MJ, Dubrow R, North American AIDS Cohort Collaboration on Research and Design of the International Epidemiologic Databases to Evaluate AIDS.: Association of immunosuppression and HIV viraemia with non-Hodgkin lymphoma risk overall and by subtype in people living with HIV in Canada and the USA: a multicentre cohort study. Lancet HIV. 2019 Apr; 2019 Feb 27. PMID: 30826282

Cheraghlou S, Schettino A, Zogg CK, Otremba MD, Bhatia A, Park HS, Osborn HA, Mehra S, Yarbrough WG, Judson BL: Adjuvant Chemotherapy Is Associated With Improved Survival for Late-Stage Salivary Squamous Cell Carcinoma. Laryngoscope. 2019 Apr; 2018 Aug 27. PMID: 30151947

Njei B, Esserman D, Krishnan S, Ohl M, Tate JP, Hauser RG, Taddei T, Lim J, Justice AC: Regional and Rural-Urban Differences in the Use of Direct-acting Antiviral Agents for Hepatitis C Virus: The Veteran Birth Cohort. Med Care. 2019 Apr. PMID: 30807449

Lu M, Ma X, Castillo-Menendez LR, Gorman J, Alsahafi N, Ermel U, Terry DS, Chambers M, Peng D, Zhang B, Zhou T, Reichard N, Wang K, Grover JR, Carman BP, Gardner MR, Nikić-Spiegel I, Sugawara A, Arthos J, Lemke EA, Smith AB 3rd, Farzan M, Abrams C, Munro JB, McDermott AB, Finzi A, Kwong PD, Blanchard SC, Sodroski JG, Mothes W: Associating HIV-1 envelope glycoprotein structures with states on the virus observed by smFRET. Nature. 2019 Apr; 2019 Apr 10. PMID: 30971821

Kuo P, Torabi SJ, Kraus D, Judson BL: Survival Outcomes for Induction vs Adjuvant Chemotherapy in Squamous Cell Carcinoma of the Maxillary Sinus. Otolaryngol Head Neck Surg. 2019 Apr; 2018 Oct 9. PMID: 30296902

Lu W, Chen S, Yu J, Behrens R, Wiggins J, Sherer N, Liu SL, Xiong Y, Xiang SH, Wu L: The Polar Region of the HIV-1 Envelope Protein Determines Viral Fusion and Infectivity by Stabilizing the gp120-gp41 Association. J Virol. 2019 Apr 1; 2019 Mar 21. PMID: 30651369

Chen J, Huang Y, Hui Q, Mathur R, Gwinn M, So-Armah K, Freiberg MS, Justice AC, Xu K, Marconi VC, Sun YV: Epigenetic Associations with Estimated Glomerular Filtration Rate (eGFR) among Men with HIV Infection. Clin Infect Dis. 2019 Mar 20; 2019 Mar 20. PMID: 30893429

Fox RK, Taddei TH, Kaplan DE: Aspirin Use and Risk of Hepatocellular Carcinoma in Hepatitis B. JAMA Intern Med. 2019 Mar 18; 2019 Mar 18. PMID: 30882884

Jung HJ, Littmann ER, Seok R, Leiner IM, Taur Y, Peled J, van den Brink M, Ling L, Chen L, Kreiswirth BN, Goodman AL, Pamer EG: Genome-Wide Screening for Enteric Colonization Factors in Carbapenem-Resistant ST258 Klebsiella pneumoniae. MBio. 2019 Mar 12; 2019 Mar 12. PMID: 30862751

Ofori-Atta A, Reynolds NR, Antwi S, Renner L, Nichols JS, Lartey M, Amissah K, Tettey JK, Alhassan A, Ofori IP, Catlin AC, Gan G, Kyriakides TC, Paintsil E, Sankofa Study Team.: Prevalence and correlates of depression among caregivers of children living with HIV in Ghana: findings from the Sankofa pediatric disclosure study. AIDS Care. 2019 Mar; 2018 Oct 25. PMID: 30360643

DeSouza F, Paintsil E, Brown T, Pierre R, Keene D, Kim N, Christie C: Transfer is not a transition - voices of Jamaican adolescents with HIV and their health care providers. AIDS Care. 2019 Mar; 2018 Oct 20. PMID: 30345791

Khan MR, McGinnis KA, Grov C, Scheidell JD, Hawks L, Edelman EJ, Fiellin DA, McInnes DK, Braithwaite RS, Justice AC, Wang EA: Past year and prior incarceration and HIV transmission risk among HIV-positive men who have sex with men in the US. AIDS Care. 2019 Mar; 2018 Aug 1. PMID: 30064277

Rentsch CT, Fiellin DA, Bryant KJ, Justice AC, Tate JP: Association Between Gabapentin Receipt for Any Indication and Alcohol Use Disorders Identification Test-Consumption Scores Among Clinical Subpopulations With and Without Alcohol Use Disorder. Alcohol Clin Exp Res. 2019 Mar; 2019 Feb 3. PMID: 30620410

Vickers Smith R, Kranzler HR, Justice AC, Tate JP, VA Million Veteran Program.: Longitudinal Drinking Patterns and Their Clinical Correlates in Million Veteran Program Participants. Alcohol Clin Exp Res. 2019 Mar; 2019 Feb 3. PMID: 30592535

Lara-Tejero M, Galán JE: The Injectisome, a Complex Nanomachine for Protein Injection into Mammalian Cells. EcoSal Plus. 2019 Mar. PMID: 30942149

Inoue K, Gan G, Ciarleglio M, Zhang Y, Tian X, Pedigo CE, Cavanaugh C, Tate J, Wang Y, Cross E, Groener M, Chai N, Wang Z, Justice A, Zhang Z, Parikh CR, Wilson FP, Ishibe S: Podocyte histone deacetylase activity regulates murine and human glomerular diseases. J Clin Invest. 2019 Mar 1; 2019 Feb 18. PMID: 30776024

Cotmore SF, Agbandje-McKenna M, Canuti M, Chiorini JA, Eis-Hubinger AM, Hughes J, Mietzsch M, Modha S, Ogliastro M, Pénzes JJ, Pintel DJ, Qiu J, Soderlund-Venermo M, Tattersall P, Tijssen P, Ictv Report Consortium: ICTV Virus Taxonomy Profile: Parvoviridae. J Gen Virol. 2019 Mar; 2019 Jan 23. PMID: 30672729

van den Pol AN, Acuna C, Davis JN, Huang H, Zhang X: Defining the caudal hypothalamic arcuate nucleus with a focus on anorexic excitatory neurons. J Physiol. 2019 Mar; 2019 Feb 6. PMID: 30618146

Cheraghlou S, Torabi SJ, Husain ZA, Otremba MD, Osborn HA, Mehra S, Yarbrough WG, Burtness BA, Judson BL: HPV status in unknown primary head and neck cancer: Prognosis and treatment outcomes. Laryngoscope. 2019 Mar; 2018 Aug 27. PMID: 30151832

Grootjans J, Krupka N, Hosomi S, Matute JD, Hanley T, Saveljeva S, Gensollen T, Heijmans J, Li H, Limenitakis JP, Ganal-Vonarburg SC, Suo S, Luoma AM, Shimodaira Y, Duan J, Shih DQ, Conner ME, Glickman JN, Fuhler GM, Palm NW, de Zoete MR, van der Woude CJ, Yuan GC, Wucherpfennig KW, Targan SR, Rosenstiel P, Flavell RA, McCoy KD, Macpherson AJ, Kaser A, Blumberg RS: Epithelial endoplasmic reticulum stress orchestrates a protective IgA response. Science. 2019 Mar 1. PMID: 30819965

Ren X, Linehan MM, Iwasaki A, Pyle AM: RIG-I Selectively Discriminates against 5'-Monophosphate RNA. Cell Rep. 2019 Feb 19. PMID: 30784585

Treger RS, Pope SD, Kong Y, Tokuyama M, Taura M, Iwasaki A: The Lupus Susceptibility Locus Sgp3 Encodes the Suppressor of Endogenous Retrovirus Expression SNERV. Immunity. 2019 Feb 19; 2019 Jan 29. PMID: 30709743

Moshkani S, Chiale C, Lang SM, Rose JK, Robek MD: A Highly Attenuated Vesicular Stomatitis Virus-Based Vaccine Platform Controls Hepatitis B Virus Replication in Mouse Models of Hepatitis B. J Virol. 2019 Mar 1; 2019 Feb 19. PMID: 30541859

Gallant JN, Sewell A, Almodovar K, Wang Q, Dahlman KB, Abramson RG, Kapp ME, Brown BT, Boyd KL, Gilbert J, Cohen DN, Yarbrough WG, Zhao Z, Lovly CM: Genomic landscape of a metastatic malignant proliferating tricholemmal tumor and its response to PI3K inhibition. NPJ Precis Oncol. 2019; 2019 Feb 15. PMID: 30793038

Kumar S, Barouch-Bentov R, Xiao F, Schor S, Pu S, Biquand E, Lu A, Lindenbach BD, Jacob Y, Demeret C, Einav S: MARCH8 Ubiquitinates the Hepatitis C Virus Nonstructural 2 Protein and Mediates Viral Envelopment. Cell Rep. 2019 Feb 12. PMID: 30759391

Zimmermann M, Zimmermann-Kogadeeva M, Wegmann R, Goodman AL: Separating host and microbiome contributions to drug pharmacokinetics and toxicity. Science. 2019 Feb 8; 2019 Feb 7. PMID: 30733391

Zhang Y, Chapman JH, Ulcay A, Sutton RE: Neutralization Synergy between HIV-1 Attachment Inhibitor Fostemsavir and Anti-CD4 Binding Site Broadly Neutralizing Antibodies against HIV. J Virol. 2019 Feb 15; 2019 Feb 5. PMID: 30518644

Taura M, Song E, Ho YC, Iwasaki A: Apobec3A maintains HIV-1 latency through recruitment of epigenetic silencing machinery to the long terminal repeat. Proc Natl Acad Sci U S A. 2019 Feb 5; 2019 Jan 22. PMID: 30670656

Hsieh E, Shiau S, Nolan O, Gibert CL, Bedimo RJ, Rodriguez-Barradas MC, Justice AC, Womack JA, Yin MT: Increased Fragility Fracture Rates in Older Men with Osteomyelitis. Clin Infect Dis. 2019 Feb 2; 2019 Feb 2. PMID: 30715288

Perkins AN, Inayat-Hussain SH, Deziel NC, Johnson CH, Ferguson SS, Garcia-Milian R, Thompson DC, Vasiliou V: Evaluation of potential carcinogenicity of organic chemicals in synthetic turf crumb rubber. Environ Res. 2019 Feb; 2018 Oct 24. PMID: 30458352

Rentsch CT, Tate JP, Steel T, Butt AA, Gibert CL, Huang L, Pisani M, Soo Hoo GW, Crystal S, Rodriguez-Barradas MC, Brown ST, Freiberg MS, Graber CJ, Kim JW, Rimland D, Justice AC, Fiellin DA, Crothers KA, Akgün KM: Medical Intensive Care Unit Admission Among Patients With and Without HIV, Hepatitis C Virus, and Alcohol-Related Diagnoses in the United States: A National, Retrospective Cohort Study, 1997-2014. J Acquir Immune Defic Syndr. 2019 Feb 1. PMID: 30422912

Althoff KN, Gebo KA, Moore RD, Boyd CM, Justice AC, Wong C, Lucas GM, Klein MB, Kitahata MM, Crane H, Silverberg MJ, Gill MJ, Mathews WC, Dubrow R, Horberg MA, Rabkin CS, Klein DB, Lo Re V, Sterling TR, Desir FA, Lichtenstein K, Willig J, Rachlis AR, Kirk GD, Anastos K, Palella FJ Jr, Thorne JE, Eron J, Jacobson LP, Napravnik S, Achenbach C, Mayor AM, Patel P, Buchacz K, Jing Y, Gange SJ, North American AIDS Cohort Collaboration on Research and Design.: Contributions of traditional and HIV-related risk factors on non-AIDS-defining cancer, myocardial infarction, and end-stage liver and renal diseases in adults with HIV in the USA and Canada: a collaboration of cohort studies. Lancet HIV. 2019 Feb; 2019 Jan 22. PMID: 30683625

Morse E, Berson E, Fujiwara R, Judson B, Mehra S: Hypopharyngeal Cancer Treatment Delays: Benchmarks and Survival Association. Otolaryngol Head Neck Surg. 2019 Feb; 2018 Oct 16. PMID: 30324861

Crothers K, Rodriguez CV, Nance RM, Akgun K, Shahrir S, Kim J, W Soo Hoo G, Sharafkhaneh A, Crane HM, Justice AC: Accuracy of electronic health record data for the diagnosis of chronic obstructive pulmonary disease in persons living with HIV and uninfected persons. Pharmacoepidemiol Drug Saf. 2019 Feb; 2018 Jun 20. PMID: 29923258

Lara-Tejero M, Qin Z, Hu B, Butan C, Liu J, Galán JE: Role of SpaO in the assembly of the sorting platform of a Salmonella type III secretion system. PLoS Pathog. 2019 Jan; 2019 Jan 22. PMID: 30668610

Liang Z, Liang F, Teng Y, Chen X, Liu J, Longerich S, Rao T, Green AM, Collins NB, Xiong Y, Lan L, Sung P, Kupfer GM: Binding of FANCI-FANCD2 Complex to RNA and R-Loops Stimulates Robust FANCD2 Monoubiquitination. Cell Rep. 2019 Jan 15. PMID: 30650351

Torabi SJ, Cheraghlou S, Kasle DA, Savoca EL, Judson BL: Nonsquamous cell laryngeal cancers: Incidence, demographics, care patterns, and effect of surgery. Laryngoscope. 2019 Jan 10; 2019 Jan 10. PMID: 30632157

Uchil PD, Pi R, Haugh KA, Ladinsky MS, Ventura JD, Barrett BS, Santiago ML, Bjorkman PJ, Kassiotis G, Sewald X, Mothes W: A Protective Role for the Lectin CD169/Siglec-1 against a Pathogenic Murine Retrovirus. Cell Host Microbe. 2019 Jan 9; 2018 Dec 27. PMID: 30595553

Edelman EJ, Gordon KS, Crothers K, Akgün K, Bryant KJ, Becker WC, Gaither JR, Gibert CL, Gordon AJ, Marshall BDL, Rodriguez-Barradas MC, Samet JH, Justice AC, Tate JP, Fiellin DA: Association of Prescribed Opioids With Increased Risk of Community-Acquired Pneumonia Among Patients With and Without HIV. JAMA Intern Med. 2019 Jan 7; 2019 Jan 7. PMID: 30615036

Warth B, Palermo A, Rattray NJW, Lee NV, Zhu Z, Hoang LT, Cai Y, Mazurek A, Dann S, VanArsdale T, Fantin VR, Shields D, Siuzdak G, Johnson CH: Palbociclib and Fulvestrant Act in Synergy to Modulate Central Carbon Metabolism in Breast Cancer Cells. Metabolites. 2019 Jan 2; 2019 Jan 2. PMID: 30609717

Townsend GE 2nd, Han W, Schwalm ND 3rd, Raghavan V, Barry NA, Goodman AL, Groisman EA: Dietary sugar silences a colonization factor in a mammalian gut symbiont. Proc Natl Acad Sci U S A. 2019 Jan 2; 2018 Dec 17. PMID: 30559205

Edelman EJ, Moore BA, Holt SR, Hansen N, Kyriakides TC, Virata M, Brown ST, Justice AC, Bryant KJ, Fiellin DA, Fiellin LE: Efficacy of Extended-Release Naltrexone on HIV-Related and Drinking Outcomes Among HIV-Positive Patients: A Randomized-Controlled Trial. AIDS Behav. 2019 Jan. PMID: 30073637

Williams EC, McGinnis KA, Edelman EJ, Matson TE, Gordon AJ, Marshall BDL, Bryant KJ, Rubinsky AD, Lapham GT, Satre DD, Richards JE, Catz SL, Fiellin DA, Justice AC, Bradley KA: Level of Alcohol Use Associated with HIV Care Continuum Targets in a National U.S. Sample of Persons Living with HIV Receiving Healthcare. AIDS Behav. 2019 Jan. PMID: 29995206

Nichols JS, Kyriakides TC, Antwi S, Renner L, Lartey M, Seaneke OA, Obeng R, Catlin AC, Gan G, Reynolds NR, Paintsil E, Sankofa Study Team.: High prevalence of non-adherence to antiretroviral therapy among undisclosed HIV-infected children in Ghana. AIDS Care. 2019 Jan; 2018 Sep 20. PMID: 30235940

Jakab SS, Garcia-Tsao G: Screening and Surveillance of Varices in Patients With Cirrhosis. Clin Gastroenterol Hepatol. 2019 Jan; 2018 Mar 15. PMID: 29551741

Kovalyova Y, Hatzios SK: Activity-Based Protein Profiling at the Host-Pathogen Interface. Curr Top Microbiol Immunol. 2019. PMID: 30203396

Ghebremichael M, Michael H, Tubbs J, Paintsil E: Comparing the Diagnostics Accuracy of CD4+ T-Lymphocyte Count and Percent as a Surrogate Markers of Pediatric HIV Disease. J Math Stat. 2019; 2019 Apr 3. PMID: 31186621

Morse E, Fujiwara RJT, Judson B, Prasad ML, Mehra S: Positive surgical margins in parotid malignancies: Institutional variation and survival association. Laryngoscope. 2019 Jan; 2018 Sep 7. PMID: 30194762

Tsai PL, Zhao C, Schlieker C: Methodologies to monitor protein turnover at the inner nuclear membrane. Methods Enzymol. 2019; 2019 Feb 8. PMID: 30910029

Pan C, Issaeva N, Yarbrough WG: HPV-driven oropharyngeal cancer: current knowledge of molecular biology and mechanisms of carcinogenesis. Cancers Head Neck. 2018; 2018 Dec 29. PMID: 31093365

Aaen G, Waltz M, Vargas W, Makhani N, Ness J, Harris Y, Casper TC, Benson L, Candee M, Chitnis T, Gorman M, Graves J, Greenberg B, Lotze T, Mar S, Tillema JM, Rensel M, Rodriguez M, Rose J, Rubin J, Schreiner T, Waldman A, Weinstock-Guttman B, Belman A, Waubant E, Krupp L: Acquisition of Early Developmental Milestones and Need for Special Education Services in Pediatric Multiple Sclerosis. J Child Neurol. 2018 Dec 17; 2018 Dec 17. PMID: 30556452

Zhang X, Hu Y, Aouizerat BE, Peng G, Marconi VC, Corley MJ, Hulgan T, Bryant KJ, Zhao H, Krystal JH, Justice AC, Xu K: Machine learning selected smoking-associated DNA methylation signatures that predict HIV prognosis and mortality. Clin Epigenetics. 2018 Dec 13; 2018 Dec 13. PMID: 30545403

Tokuyama M, Kong Y, Song E, Jayewickreme T, Kang I, Iwasaki A: ERVmap analysis reveals genome-wide transcription of human endogenous retroviruses. Proc Natl Acad Sci U S A. 2018 Dec 11; 2018 Nov 19. PMID: 30455304

Wang W, Chen X, Wolin SL, Xiong Y: Structural Basis for tRNA Mimicry by a Bacterial Y RNA. Structure. 2018 Dec 4; 2018 Oct 11. PMID: 30318468

Justice AC, Smith RV, Tate JP, McGinnis K, Xu K, Becker WC, Lee KY, Lynch K, Sun N, Concato J, Fiellin DA, Zhao H, Gelernter J, Kranzler HR, VA Million Veteran Program.: AUDIT-C and ICD codes as phenotypes for harmful alcohol use: association with ADH1B polymorphisms in two US populations. Addiction. 2018 Dec; 2018 Aug 1. PMID: 29972609

Grover S, Desir F, Jing Y, Bhatia RK, Trifiletti DM, Swisher-McClure S, Kobie J, Moore RD, Rabkin CS, Silverberg MJ, Salters K, Mathews WC, Gill MJ, Thorne JE, Castilho J, Kitahata MM, Justice A, Horberg MA, Achenbach CJ, Mayor AM, Althoff KN, North American AIDS Cohort Collaboration on Research and Design.: Reduced Cancer Survival Among Adults With HIV and AIDS-Defining Illnesses Despite No Difference in Cancer Stage at Diagnosis. J Acquir Immune Defic Syndr. 2018 Dec 1. PMID: 30211722

Hawkins KL, Gordon KS, Levin MJ, Weinberg A, Battaglia C, Rodriguez-Barradas MC, Brown ST, Rimland D, Justice A, Tate J, Erlandson KM, VACS Project Team.: Herpes Zoster and Herpes Zoster Vaccine Rates Among Adults Living With and Without HIV in the Veterans Aging Cohort Study. J Acquir Immune Defic Syndr. 2018 Dec 1. PMID: 30179984

Wadia R, Akgun K, Brandt C, Fenton BT, Levin W, Marple AH, Garla V, Rose MG, Taddei T, Taylor C: Comparison of Natural Language Processing and Manual Coding for the Identification of Cross-Sectional Imaging Reports Suspicious for Lung Cancer. JCO Clin Cancer Inform. 2018 Dec. PMID: 30652545

Cheraghlou S, Schettino A, Zogg CK, Judson BL: Changing prognosis of oral cancer: An analysis of survival and treatment between 1973 and 2014. Laryngoscope. 2018 Dec; 2018 Sep 7. PMID: 30194691

Morse E, Fujiwara RJT, Judson B, Mehra S: Treatment delays in laryngeal squamous cell carcinoma: A national cancer database analysis. Laryngoscope. 2018 Dec; 2018 May 14. PMID: 29756382

Fedorova O, Jagdmann GE Jr, Adams RL, Yuan L, Van Zandt MC, Pyle AM: Small molecules that target group II introns are potent antifungal agents. Nat Chem Biol. 2018 Dec; 2018 Oct 15. PMID: 30323219

Heimer R, Hawk K, Vermund SH: Prevalent misconceptions about opioid use disorders in the United States produce failed policy and public health responses. Clin Infect Dis. 2018 Nov 17; 2018 Nov 17. PMID: 30452633

Eliassen E, Lum E, Pritchett J, Ongradi J, Krueger G, Crawford JR, Phan TL, Ablashi D, Hudnall SD: Human Herpesvirus 6 and Malignancy: A Review. Front Oncol. 2018; 2018 Nov 13. PMID: 30542640

Jacobs D, Zhu R, Luo J, Grisotti G, Heller DR, Kurbatov V, Johnson CH, Zhang Y, Khan SA: Defining Early-Onset Colon and Rectal Cancers. Front Oncol. 2018; 2018 Nov 6. PMID: 30460196

Rentsch CT, Cartwright EJ, Gandhi NR, Brown ST, Rodriguez-Barradas MC, Goetz MB, Marconi VC, Gibert CL, Re VL 3rd, Fiellin DA, Justice AC, Tate JP: Provider verification of electronic health record receipt and nonreceipt of direct-acting antivirals for the treatment of hepatitis C virus infection. Ann Epidemiol. 2018 Nov; 2018 Aug 23. PMID: 30195616

Gaither JR, Gordon K, Crystal S, Edelman EJ, Kerns RD, Justice AC, Fiellin DA, Becker WC: Racial disparities in discontinuation of long-term opioid therapy following illicit drug use among black and white patients. Drug Alcohol Depend. 2018 Nov 1; 2018 Aug 6. PMID: 30122319

Kayongo A, Gonzalo-Gil E, Gümüşgöz E, Niwaha AJ, Semitala F, Kalyesubula R, Bagaya BS, Joloba ML, Sutton RE: Brief Report: Identification of Elite and Viremic Controllers From a Large Urban HIV Ambulatory Center in Kampala, Uganda. J Acquir Immune Defic Syndr. 2018 Nov 1. PMID: 30063647

Carlucci JG, Liu Y, Friedman H, Pelayo BE, Robelin K, Sheldon EK, Clouse K, Vermund SH: Attrition of HIV-exposed infants from early infant diagnosis services in low- and middle-income countries: a systematic review and meta-analysis. J Int AIDS Soc. 2018 Nov. PMID: 30649834

Greig CJ, Alper A, Goodman AL, Cowles RA: Mucosal homeostasis is altered in the ileum of gnotobiotic mice. J Surg Res. 2018 Nov; 2018 Jun 28. PMID: 30278949

Wainberg ML, Helpman L, Duarte CS, Vermund SH, Mootz JJ, Gouveia L, Oquendo MA, McKinnon K, Cournos F: Curtailing the communicability of psychiatric disorders. Lancet Psychiatry. 2018 Nov; 2018 Oct 10. PMID: 30316807

Geiger T, Pazos M, Lara-Tejero M, Vollmer W, Galán JE: Peptidoglycan editing by a specific LD-transpeptidase controls the muramidase-dependent secretion of typhoid toxin. Nat Microbiol. 2018 Nov; 2018 Sep 24. PMID: 30250245

Withers JB, Li ES, Vallery TK, Yario TA, Steitz JA: Two herpesviral noncoding PAN RNAs are functionally homologous but do not associate with common chromatin loci. PLoS Pathog. 2018 Nov; 2018 Nov 1. PMID: 30383841

Oi C, Treado JD, Levine ZA, Lim CS, Knecht KM, Xiong Y, O'Hern CS, Regan L: A threonine zipper that mediates protein-protein interactions: Structure and prediction. Protein Sci. 2018 Nov. PMID: 30198622

Cheng H, Yang X, Si H, Saleh AD, Xiao W, Coupar J, Gollin SM, Ferris RL, Issaeva N, Yarbrough WG, Prince ME, Carey TE, Van Waes C, Chen Z: Genomic and Transcriptomic Characterization Links Cell Lines with Aggressive Head and Neck Cancers. Cell Rep. 2018 Oct 30. PMID: 30380422

Zhang X, Yu Y, Yang H, Xu H, Vermund SH, Liu K: Surveillance of Maternal Syphilis in China: Pregnancy Outcomes and Determinants of Congenital Syphilis. Med Sci Monit. 2018 Oct 29; 2018 Oct 29. PMID: 30370903

Knecht KM, Buzovetsky O, Schneider C, Thomas D, Srikanth V, Kaderali L, Tofoleanu F, Reiss K, Ferreirós N, Geisslinger G, Batista VS, Ji X, Cinatl J Jr, Keppler OT, Xiong Y: The structural basis for cancer drug interactions with the catalytic and allosteric sites of SAMHD1. Proc Natl Acad Sci U S A. 2018 Oct 23; 2018 Oct 10. PMID: 30305425

Feder SL, Tate JP, Akgün KM, Womack JA, Jeon S, Funk M, Bedimo RJ, Budoff MJ, Butt AA, Crothers K, Redeker NS: The Association Between HIV Infection and the Use of Palliative Care in Patients Hospitalized With Heart Failure. Am J Hosp Palliat Care. 2018 Oct 10; 2018 Oct 10. PMID: 30304939

Ullah I, Chung K, Oh J, Beloor J, Bae S, Lee SC, Lee M, Kumar P, Lee SK: Intranasal delivery of a Fas-blocking peptide attenuates Fas-mediated apoptosis in brain ischemia. Sci Rep. 2018 Oct 9; 2018 Oct 9. PMID: 30301943

Singh R, Stoneham C, Lim C, Jia X, Guenaga J, Wyatt R, Wertheim JO, Xiong Y, Guatelli J: Phosphoserine acidic cluster motifs bind distinct basic regions on the μ subunits of clathrin adaptor protein complexes. J Biol Chem. 2018 Oct 5; 2018 Aug 22. PMID: 30135209

McGinnis KA, Justice AC, Tate JP, Kranzler HR, Tindle HA, Becker WC, Concato J, Gelernter J, Li B, Zhang X, Zhao H, Crothers K, Xu K, VACS Project Group.: Using DNA methylation to validate an electronic medical record phenotype for smoking. Addict Biol. 2018 Oct 4; 2018 Oct 4. PMID: 30284751

Park D, Lara-Tejero M, Waxham MN, Li W, Hu B, Galán JE, Liu J: Visualization of the type III secretion mediated Salmonella-host cell interface using cryo-electron tomography. Elife. 2018 Oct 3; 2018 Oct 3. PMID: 30281019

Dennis AM, Volz E, Frost ASMSDW, Hossain M, Poon AFY, Rebeiro PF, Vermund SH, Sterling TR, Kalish ML: HIV-1 Transmission Clustering and Phylodynamics Highlight the Important Role of Young Men Who Have Sex with Men. AIDS Res Hum Retroviruses. 2018 Oct; 2018 Aug 23. PMID: 30027754

Barry DT, Marshall BDL, Becker WC, Gordon AJ, Crystal S, Kerns RD, Gaither JR, Gordon KS, Justice AC, Fiellin DA, Edelman EJ: Duration of opioid prescriptions predicts incident nonmedical use of prescription opioids among U.S. veterans receiving medical care. Drug Alcohol Depend. 2018 Oct 1; 2018 Aug 22. PMID: 30176548

Inoue T, Zhang P, Zhang W, Goodner-Bingham K, Dupzyk A, DiMaio D, Tsai B: γ-Secretase promotes membrane insertion of the human papillomavirus L2 capsid protein during virus infection. J Cell Biol. 2018 Oct 1; 2018 Jul 13. PMID: 30006461

Sun H, Kamanova J, Lara-Tejero M, Galán JE: Salmonella stimulates pro-inflammatory signalling through p21-activated kinases bypassing innate immune receptors. Nat Microbiol. 2018 Oct; 2018 Sep 17. PMID: 30224799

Lee NCJ, Kelly JR, Park HS, An Y, Judson BL, Burtness BA, Husain ZA: Patterns of failure in high-metastatic node number human papillomavirus-positive oropharyngeal carcinoma. Oral Oncol. 2018 Oct; 2018 Aug 20. PMID: 30220317

DiMaio D, Dermody TS, Enquist LW: Reductio ad Intellectum. Annu Rev Virol. 2018 Sep 29. PMID: 30265630

Matson TE, McGinnis KA, Rubinsky AD, Frost MC, Czarnogorski M, Bryant KJ, Edelman EJ, Satre DD, Catz SL, Bensley KM, Fiellin DA, Justice AC, Williams EC: Gender and alcohol use: influences on HIV care continuum in a national cohort of patients with HIV. AIDS. 2018 Sep 24. PMID: 30005010

Schofield WB, Palm NW: Gut Microbiota: IgA Protects the Pioneers. Curr Biol. 2018 Sep 24. PMID: 30253156

Kann BH, Aneja S, Loganadane GV, Kelly JR, Smith SM, Decker RH, Yu JB, Park HS, Yarbrough WG, Malhotra A, Burtness BA, Husain ZA: Pretreatment Identification of Head and Neck Cancer Nodal Metastasis and Extranodal Extension Using Deep Learning Neural Networks. Sci Rep. 2018 Sep 19; 2018 Sep 19. PMID: 30232350

Wexler AG, Schofield WB, Degnan PH, Folta-Stogniew E, Barry NA, Goodman AL: Human gut Bacteroides capture vitamin B12 via cell surface-exposed lipoproteins. Elife. 2018 Sep 18; 2018 Sep 18. PMID: 30226189

Yockey LJ, Iwasaki A: Interferons and Proinflammatory Cytokines in Pregnancy and Fetal Development. Immunity. 2018 Sep 18. PMID: 30231982

Lyons DE, Yu KP, Vander Heiden JA, Heston L, Dittmer DP, El-Guindy A, Miller G: Mutant Cellular AP-1 Proteins Promote Expression of a Subset of Epstein-Barr Virus Late Genes in the Absence of Lytic Viral DNA Replication. J Virol. 2018 Oct 1; 2018 Sep 12. PMID: 30021895

Mihaylova VT, Kong Y, Fedorova O, Sharma L, Dela Cruz CS, Pyle AM, Iwasaki A, Foxman EF: Regional Differences in Airway Epithelial Cells Reveal Tradeoff between Defense against Oxidative Stress and Defense against Rhinovirus. Cell Rep. 2018 Sep 11. PMID: 30208323

Zhang P, Monteiro da Silva G, Deatherage C, Burd C, DiMaio D: Cell-Penetrating Peptide Mediates Intracellular Membrane Passage of Human Papillomavirus L2 Protein to Trigger Retrograde Trafficking. Cell. 2018 Sep 6; 2018 Aug 16. PMID: 30122350

Orzalli MH, Smith A, Jurado KA, Iwasaki A, Garlick JA, Kagan JC: An Antiviral Branch of the IL-1 Signaling Pathway Restricts Immune-Evasive Virus Replication. Mol Cell. 2018 Sep 6; 2018 Aug 9. PMID: 30100266

Schuette D, Moore LM, Robert ME, Taddei TH, Ehrlich BE: Hepatocellular Carcinoma Outcome Is Predicted by Expression of Neuronal Calcium Sensor 1. Cancer Epidemiol Biomarkers Prev. 2018 Sep; 2018 May 22. PMID: 29789326

Morse E, Fujiwara RJT, Husain Z, Judson B, Mehra S: Pediatric Salivary Cancer: Epidemiology, Treatment Trends, and Association of Treatment Modality with Survival. Otolaryngol Head Neck Surg. 2018 Sep; 2018 Apr 24. PMID: 29688836

Zhang X, Mao G, van den Pol AN: Chikungunya-vesicular stomatitis chimeric virus targets and eliminates brain tumors. Virology. 2018 Sep; 2018 Jul 26. PMID: 30055515

Kudalkar SN, Beloor J, Quijano E, Spasov KA, Lee WG, Cisneros JA, Saltzman WM, Kumar P, Jorgensen WL, Anderson KS: Reply to Pandey et al.: Understanding the efficacy of a potential antiretroviral drug candidate in humanized mouse model of HIV infection. Proc Natl Acad Sci U S A. 2018 Aug 28; 2018 Aug 10. PMID: 30097540

Li M, Sopeyin A, Paintsil E: Combination of Tenofovir and Emtricitabine with Efavirenz Does Not Moderate Inhibitory Effect of Efavirenz on Mitochondrial Function and Cholesterol Biosynthesis in Human T Lymphoblastoid Cell Line. Antimicrob Agents Chemother. 2018 Sep; 2018 Aug 27. PMID: 30012753

Agosto LM, Herring MB, Mothes W, Henderson AJ: HIV-1-Infected CD4+ T Cells Facilitate Latent Infection of Resting CD4+ T Cells through Cell-Cell Contact. Cell Rep. 2018 Aug 21. PMID: 30134170

Zhang J, Chen T, Yang X, Cheng H, Späth SS, Clavijo PE, Chen J, Silvin C, Issaeva N, Su X, Yarbrough WG, Annunziata CM, Chen Z, Van Waes C: Attenuated TRAF3 Fosters Activation of Alternative NF-κB and Reduced Expression of Antiviral Interferon, TP53, and RB to Promote HPV-Positive Head and Neck Cancers. Cancer Res. 2018 Aug 15; 2018 Jun 19. PMID: 29921694

Yanik EL, Hernández-Ramírez RU, Qin L, Lin H, Leyden W, Neugebauer RS, Horberg MA, Moore RD, Mathews WC, Justice AC, Hessol NA, Mayor AM, Gill MJ, Brooks JT, Sun J, Althoff KN, Engels EA, Silverberg MJ, Dubrow R: Brief Report: Cutaneous Melanoma Risk Among People With HIV in the United States and Canada. J Acquir Immune Defic Syndr. 2018 Aug 15. PMID: 29771785

Lucas CGO, Kitoko JZ, Ferreira FM, Suzart VG, Papa MP, Coelho SVA, Cavazzoni CB, Paula-Neto HA, Olsen PC, Iwasaki A, Pereira RM, Pimentel-Coelho PM, Vale AM, de Arruda LB, Bozza MT: Critical role of CD4+ T cells and IFNγ signaling in antibody-mediated resistance to Zika virus infection. Nat Commun. 2018 Aug 7; 2018 Aug 7. PMID: 30087337

Forbes NS, Coffin RS, Deng L, Evgin L, Fiering S, Giacalone M, Gravekamp C, Gulley JL, Gunn H, Hoffman RM, Kaur B, Liu K, Lyerly HK, Marciscano AE, Moradian E, Ruppel S, Saltzman DA, Tattersall PJ, Thorne S, Vile RG, Zhang HH, Zhou S, McFadden G: White paper on microbial anti-cancer therapy and prevention. J Immunother Cancer. 2018 Aug 6; 2018 Aug 6. PMID: 30081947

Wu L, Cao J, Cai WL, Lang SM, Horton JR, Jansen DJ, Liu ZZ, Chen JF, Zhang M, Mott BT, Pohida K, Rai G, Kales SC, Henderson MJ, Hu X, Jadhav A, Maloney DJ, Simeonov A, Zhu S, Iwasaki A, Hall MD, Cheng X, Shadel GS, Yan Q: KDM5 histone demethylases repress immune response via suppression of STING. PLoS Biol. 2018 Aug; 2018 Aug 6. PMID: 30080846

Kanwal F, Mapaskhi S, Smith D, Taddei T, Hussain K, Madu S, Duong N, White D, Cao Y, Mehta R, El-Serag H, Asch S, Midboe A: Implementation of a Population-Based Cirrhosis Identification and Management System. Clin Gastroenterol Hepatol. 2018 Aug; 2018 May 24. PMID: 29803805

Audet CM, Graves E, Barreto E, De Schacht C, Gong W, Shepherd BE, Aboobacar A, Gonzalez-Calvo L, Alvim MF, Aliyu MH, Kipp AM, Jordan H, Amico KR, Diemer M, Ciaranello A, Dugdale C, Vermund SH, Van Rompaey S: Partners-based HIV treatment for seroconcordant couples attending antenatal and postnatal care in rural Mozambique: A cluster randomized trial protocol. Contemp Clin Trials. 2018 Aug; 2018 Jun 5. PMID: 29879469

Williams EC, McGinnis KA, Bobb JF, Rubinsky AD, Lapham GT, Skanderson M, Catz SL, Bensley KM, Richards JE, Bryant KJ, Edelman EJ, Satre DD, Marshall BDL, Kraemer KL, Blosnich JR, Crystal S, Gordon AJ, Fiellin DA, Justice AC, Bradley KA: Changes in alcohol use associated with changes in HIV disease severity over time: A national longitudinal study in the Veterans Aging Cohort. Drug Alcohol Depend. 2018 Aug 1; 2018 May 24. PMID: 29859388

Oquendo MA, Duarte C, Gouveia L, Mari JJ, Mello MF, Audet CM, Pinsky I, Vermund SH, Mocumbi AO, Wainberg ML: Building capacity for global mental health research: challenges to balancing clinical and research training. Lancet Psychiatry. 2018 Aug; 2018 Apr 5. PMID: 29628365

Morse E, Fujiwara RJT, Judson B, Mehra S: Treatment Times in Salivary Gland Cancer: National Patterns and Association with Survival. Otolaryngol Head Neck Surg. 2018 Aug; 2018 Feb 20. PMID: 29460669

Vermund SH, Kelley KF: Impact of HIV on human papilloma virus-mediated cervical disease progression. AIDS. 2018 Jul 31. PMID: 30001245

Morse E, Judson B, Husain Z, Burtness B, Yarbrough WG, Sasaki C, Cheraghlou S, Mehra S: Treatment Delays in Primarily Resected Oropharyngeal Squamous Cell Carcinoma: National Benchmarks and Survival Associations. Otolaryngol Head Neck Surg. 2018 Jul 31; 2018 Jul 31. PMID: 30060700

Lechner M, Vassie C, Kavasogullari C, Jones O, Howard J, Masterson L, Fenton T, Yarbrough W, Waller J, Gilson R: A cross-sectional survey of awareness of human papillomavirus-associated oropharyngeal cancers among general practitioners in the UK. BMJ Open. 2018 Jul 28; 2018 Jul 28. PMID: 30056394

Saffo S, Taddei T: SGLT2 inhibitors and cirrhosis: A unique perspective on the comanagement of diabetes mellitus and ascites. Clin Liver Dis (Hoboken). 2018 Jun; 2018 Jul 26. PMID: 30992805

Park LS, Tate JP, Sigel K, Brown ST, Crothers K, Gibert C, Goetz MB, Rimland D, Rodriguez-Barradas MC, Bedimo RJ, Justice AC, Dubrow R: Association of Viral Suppression With Lower AIDS-Defining and Non-AIDS-Defining Cancer Incidence in HIV-Infected Veterans: A Prospective Cohort Study. Ann Intern Med. 2018 Jul 17; 2018 Jun 12. PMID: 29893768

Beckman JA, Duncan MS, Alcorn CW, So-Armah K, Butt AA, Goetz MB, Tindle HA, Sico JJ, Tracy RP, Justice AC, Freiberg MS: Association of Human Immunodeficiency Virus Infection and Risk of Peripheral Artery Disease. Circulation. 2018 Jul 17; 2018 Mar 13. PMID: 29535090

Kato J, Dey S, Soto JE, Butan C, Wilkinson MC, De Guzman RN, Galan JE: A protein secreted by the Salmonella type III secretion system controls needle filament assembly. Elife. 2018 Jul 17; 2018 Jul 17. PMID: 30015613

Antonucci JM, Kim SH, St Gelais C, Bonifati S, Li TW, Buzovetsky O, Knecht KM, Duchon AA, Xiong Y, Musier-Forsyth K, Wu L: SAMHD1 Impairs HIV-1 Gene Expression and Negatively Modulates Reactivation of Viral Latency in CD4+ T Cells. J Virol. 2018 Aug 1; 2018 Jul 17. PMID: 29793958

Schofield WB, Zimmermann-Kogadeeva M, Zimmermann M, Barry NA, Goodman AL: The Stringent Response Determines the Ability of a Commensal Bacterium to Survive Starvation and to Persist in the Gut. Cell Host Microbe. 2018 Jul 11; 2018 Jun 28. PMID: 30008292

Cheraghlou S, Yu PK, Otremba MD, Mehra S, Yarbrough WG, Judson BL: Extracapsular extension is not a significant prognostic indicator in non-squamous cancers of the major salivary glands. Cancers Head Neck. 2018; 2018 Jul 3. PMID: 31093358

Yin L, Zhao Y, Peratikos MB, Song L, Zhang X, Xin R, Sun Z, Xu Y, Zhang L, Hu Y, Hao C, Ruan Y, Shao Y, Vermund SH, Qian HZ: Risk Prediction Score for HIV Infection: Development and Internal Validation with Cross-Sectional Data from Men Who Have Sex with Men in China. AIDS Behav. 2018 Jul. PMID: 29786768

Halpin SN, Carruth EC, Rai RP, Edelman EJ, Fiellin DA, Gibert C, Gordon KS, Huang W, Justice A, Marconi VC, Rimland D, Perkins MM: Correction to: Complementary and Alternative Medicine Among Persons living with HIV in the Era of Combined Antiretroviral Treatment. AIDS Behav. 2018 Jul. PMID: 29524095

Adams JW, Bryant KJ, Edelman EJ, Fiellin DA, Gaither JR, Gordon AJ, Gordon KS, Kraemer KL, Mimiaga MJ, Operario D, Tate JP, van den Berg JJ, Justice AC, Marshall BDL: Correction to: Association of Cannabis, Stimulant, and Alcohol use with Mortality Prognosis Among HIV-Infected Men. AIDS Behav. 2018 Jul. PMID: 29520509

Landis RC, Abayomi EA, Bain BC, Greene E, Janossy G, Joseph P, Kerrigan D, McCoy JP, Nunez C, O'Gorman M, Pastoors A, Parekh BS, Quimby KR, Quinn TC, Robertson KR, Thomas R, van Gorp E, Vermund SH, Wilson V: Shifting the HIV Paradigm from Care to Cure: Proceedings from the Caribbean Expert Summit in Barbados, August 2017. AIDS Res Hum Retroviruses. 2018 Jul; 2018 Jun 5. PMID: 29732897

Feder SL, Redeker NS, Jeon S, Schulman-Green D, Womack JA, Tate JP, Bedimo RJ, Budoff MJ, Butt AA, Crothers K, Akgün KM: Validation of the ICD-9 Diagnostic Code for Palliative Care in Patients Hospitalized With Heart Failure Within the Veterans Health Administration. Am J Hosp Palliat Care. 2018 Jul; 2017 Dec 18. PMID: 29254358

Cheraghlou S, Kuo P, Mehra S, Agogo GO, Bhatia A, Husain ZA, Yarbrough WG, Burtness BA, Judson BL: Adjuvant therapy in major salivary gland cancers: Analysis of 8580 patients in the National Cancer Database. Head Neck. 2018 Jul; 2018 May 13. PMID: 29756412

Clouse K, Fox MP, Mongwenyana C, Motlhatlhedi M, Buthelezi S, Bokaba D, Norris SA, Bassett J, Lurie MN, Aronoff DM, Vermund SH: "I will leave the baby with my mother": Long-distance travel and follow-up care among HIV-positive pregnant and postpartum women in South Africa. J Int AIDS Soc. 2018 Jul. PMID: 30027665

Heimer R, Hawk K, Vermund SH: Countering the prevailing narrative about the causes of the US opioid crisis. Lancet Psychiatry. 2018 Jul. PMID: 29941135

Morse E, Judson B, Husain Z, Burtness B, Yarbrough W, Sasaki C, Cheraghlou S, Mehra S: National treatment times in oropharyngeal cancer treated with primary radiation or chemoradiation. Oral Oncol. 2018 Jul; 2018 May 26. PMID: 29909886

Sabath N, Vilborg A, Steitz JA, Shalgi R: Caution needs to be taken when assigning transcription start sites to ends of protein-coding genes: a rebuttal. Hum Genomics. 2018 Jun 27; 2018 Jun 27. PMID: 29945683

Pan C, Yarbrough WG, Issaeva N: Advances in biomarkers and treatment strategies for HPV-associated head and neck cancer. Oncoscience. 2018 May; 2018 Jun 25. PMID: 30035167

Chattopadhyay A, Aguilar PV, Bopp NE, Yarovinsky TO, Weaver SC, Rose JK: A recombinant virus vaccine that protects against both Chikungunya and Zika virus infections. Vaccine. 2018 Jun 22; 2018 May 26. PMID: 29807712

Li H, Park HS, Osborn HA, Judson BL: Sex differences in patients with high risk HPV-associated and HPV negative oropharyngeal and oral cavity squamous cell carcinomas. Cancers Head Neck. 2018; 2018 Jun 20. PMID: 31093357

Kong CY, Sigel K, Criss SD, Sheehan DF, Triplette M, Silverberg MJ, Henschke CI, Justice A, Braithwaite RS, Wisnivesky J, Crothers K: Benefits and harms of lung cancer screening in HIV-infected individuals with CD4+ cell count at least 500 cells/μl. AIDS. 2018 Jun 19. PMID: 29683843

Vallery TK, Withers JB, Andoh JA, Steitz JA: Kaposi's Sarcoma-Associated Herpesvirus mRNA Accumulation in Nuclear Foci Is Influenced by Viral DNA Replication and Viral Noncoding Polyadenylated Nuclear RNA. J Virol. 2018 Jul 1; 2018 Jun 13. PMID: 29643239

Petti LM, Marlatt SA, Luo Y, Scheideman EH, Shelar A, DiMaio D: Regulation of C-C chemokine receptor 5 (CCR5) stability by Lys197 and by transmembrane protein aptamers that target it for lysosomal degradation. J Biol Chem. 2018 Jun 8; 2018 Apr 20. PMID: 29678881

King JT Jr, Angoff NR, Forrest JN Jr, Justice AC: Gender Disparities in Medical Student Research Awards: A 13-Year Study From the Yale School of Medicine. Acad Med. 2018 Jun. PMID: 29140916

Scott JW, Raykar NP, Rose JA, Tsai TC, Zogg CK, Haider AH, Salim A, Meara JG, Shrime MG: Cured into Destitution: Catastrophic Health Expenditure Risk Among Uninsured Trauma Patients in the United States. Ann Surg. 2018 Jun. PMID: 28394867

Li H, Torabi SJ, Yarbrough WG, Mehra S, Osborn HA, Judson B: Association of Human Papillomavirus Status at Head and Neck Carcinoma Subsites With Overall Survival. JAMA Otolaryngol Head Neck Surg. 2018 Jun 1. PMID: 29801040

Schwam ZG, Michaelides E, Kuo P, Hajek MA, Judson BL, Schutt C: Thirty-day morbidity and mortality following otologic/neurotologic surgery: Analysis of the national surgical quality improvement program. Laryngoscope. 2018 Jun; 2017 Sep 22. PMID: 28940480

Cheraghlou S, Otremba M, Kuo Yu P, Agogo GO, Hersey D, Judson BL: Prognostic Value of Lymph Node Yield and Density in Head and Neck Malignancies. Otolaryngol Head Neck Surg. 2018 Jun; 2018 Feb 20. PMID: 29460685

Heavner JJ, Akgün KM, Heavner MS, Eng CC, Drew M, Jackson P, Pritchard D IX, Honiden S: Implementation of an ICU-Specific Alcohol Withdrawal Syndrome Management Protocol Reduces the Need for Mechanical Ventilation. Pharmacotherapy. 2018 May 25; 2018 May 25. PMID: 29800507

Song RJ, Nguyen XT, Quaden R, Ho YL, Justice AC, Gagnon DR, Cho K, O'Donnell CJ, Concato J, Gaziano JM, Djoussé L, VA Million Veteran Program.: Alcohol Consumption and Risk of Coronary Artery Disease (from the Million Veteran Program). Am J Cardiol. 2018 May 15; 2018 Feb 12. PMID: 29580627

Marconi VC, Duncan MS, So-Armah K, Re VL 3rd, Lim JK, Butt AA, Goetz MB, Rodriguez-Barradas MC, Alcorn CW, Lennox J, Beckman JA, Justice A, Freiberg M: Bilirubin Is Inversely Associated With Cardiovascular Disease Among HIV-Positive and HIV-Negative Individuals in VACS (Veterans Aging Cohort Study). J Am Heart Assoc. 2018 May 2; 2018 May 2. PMID: 29720501

Zhou J, Hu F, Wu J, Zou ZY, Wang YX, Peng HC, Vermund SH, Hu YF, Ma YH: Subjective Well-being and Family Functioning among Adolescents Left Behind by Migrating Parents in Jiangxi Province, China. Biomed Environ Sci. 2018 May. PMID: 29866220

Elion RA, Althoff KN, Zhang J, Moore RD, Gange SJ, Kitahata MM, Crane HM, Drozd DR, Stein JH, Klein MB, Eron JJ, Silverberg MJ, Mathews WC, Justice AC, Sterling TR, Rabkin CS, Mayor AM, Klein DB, Horberg MA, Bosch RJ, Eyawo O, Palella FJ Jr, North American AIDS Cohort Collaboration on Research and Design of IeDEA.: Recent Abacavir Use Increases Risk of Type 1 and Type 2 Myocardial Infarctions Among Adults With HIV. J Acquir Immune Defic Syndr. 2018 May 1. PMID: 29419568

Cheraghlou S, Li H, Judson BL: Association of Facility and System Factors With Survival Among Pediatric Patients With Surgically Treated Head and Neck Sarcomas. JAMA Otolaryngol Head Neck Surg. 2018 May 1. PMID: 29800240

Langberg KM, Kapo JM, Taddei TH: Palliative care in decompensated cirrhosis: A review. Liver Int. 2018 May; 2018 Jan 15. PMID: 29112338

Gopinath S, Kim MV, Rakib T, Wong PW, van Zandt M, Barry NA, Kaisho T, Goodman AL, Iwasaki A: Topical application of aminoglycoside antibiotics enhances host resistance to viral infections in a microbiota-independent manner. Nat Microbiol. 2018 May; 2018 Apr 9. PMID: 29632368

Hayashi K, Taura M, Iwasaki A: The interaction between IKKα and LC3 promotes type I interferon production through the TLR9-containing LAPosome. Sci Signal. 2018 May 1; 2018 May 1. PMID: 29717061

Chen S, Bonifati S, Qin Z, St Gelais C, Kodigepalli KM, Barrett BS, Kim SH, Antonucci JM, Ladner KJ, Buzovetsky O, Knecht KM, Xiong Y, Yount JS, Guttridge DC, Santiago ML, Wu L: SAMHD1 suppresses innate immune responses to viral infections and inflammatory stimuli by inhibiting the NF-κB and interferon pathways. Proc Natl Acad Sci U S A. 2018 Apr 17; 2018 Apr 2. PMID: 29610295

Beloor J, Maes N, Ullah I, Uchil P, Jackson A, Fikrig E, Lee SK, Kumar P: Small Interfering RNA-Mediated Control of Virus Replication in the CNS Is Therapeutic and Enables Natural Immunity to West Nile Virus. Cell Host Microbe. 2018 Apr 11; 2018 Mar 29. PMID: 29606496

Wong C, Gange SJ, Moore RD, Justice AC, Buchacz K, Abraham AG, Rebeiro PF, Koethe JR, Martin JN, Horberg MA, Boyd CM, Kitahata MM, Crane HM, Gebo KA, Gill MJ, Silverberg MJ, Palella FJ, Patel P, Samji H, Thorne J, Rabkin CS, Mayor A, Althoff KN, North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) .: Multimorbidity Among Persons Living with Human Immunodeficiency Virus in the United States. Clin Infect Dis. 2018 Apr 3. PMID: 29149237

Adams JW, Bryant KJ, Edelman EJ, Fiellin DA, Gaither JR, Gordon AJ, Gordon KS, Kraemer KL, Mimiaga MJ, Operario D, Tate JP, van den Berg JJ, Justice AC, Marshall BDL: Association of Cannabis, Stimulant, and Alcohol use with Mortality Prognosis Among HIV-Infected Men. AIDS Behav. 2018 Apr. PMID: 28887669

Brittain EL, Duncan MS, Chang J, Patterson OV, DuVall SL, Brandt CA, So-Armah KA, Goetz M, Akgun K, Crothers K, Zola C, Kim J, Gibert C, Pisani M, Morris A, Hsue P, Tindle HA, Justice A, Freiberg M: Increased Echocardiographic Pulmonary Pressure in HIV-infected and -uninfected Individuals in the Veterans Aging Cohort Study. Am J Respir Crit Care Med. 2018 Apr 1. PMID: 29131651

Weber U, Johnson J, Anderson N, Knies AK, Nhundu B, Bautista C, Huang KB, Hamza M, White J, Coppola A, Akgün KM, Greer DM, Marcolini EG, Gilmore EJ, Petersen NH, Timario N, Poskus K, Sheth KN, Hwang DY: Dedicated Afternoon Rounds for ICU Patients' Families and Family Satisfaction With Care. Crit Care Med. 2018 Apr. PMID: 29300237

Rao T, Longerich S, Zhao W, Aihara H, Sung P, Xiong Y: Importance of homo-dimerization of Fanconi-associated nuclease 1 in DNA flap cleavage. DNA Repair (Amst). 2018 Apr; 2018 Feb 21. PMID: 29518739

Zhu R, Liu F, Grisotti G, Pérez-Irizarry J, Cha CH, Johnson CH, Boffa DJ, Han D, Johung KL, Zhang Y, Khan SA: Distinctive features of gastrointestinal stromal tumors arising from the colon and rectum. J Gastrointest Oncol. 2018 Apr. PMID: 29755761

Bledsoe TJ, Park HS, Stahl JM, Yarbrough WG, Burtness BA, Decker RH, Husain ZA: Response. J Natl Cancer Inst. 2018 Apr 1. PMID: 29121329

Kaplan DE, Mehta R, D'Addeo K, Gade TP, Taddei TH: Transarterial Chemoembolization within First 3 Months of Sorafenib Initiation Improves Overall Survival in Hepatocellular Carcinoma: A Retrospective, Multi-Institutional Study with Propensity Matching. J Vasc Interv Radiol. 2018 Apr; 2018 Feb 22. PMID: 29477619

Judson BL: Lymph Node Yield as Quality Metric for Clinically N0 Oral Cancer. JAMA Otolaryngol Head Neck Surg. 2018 Apr 1. PMID: 29494723

Kelly JR, Park HS, An Y, Yarbrough WG, Contessa JN, Decker R, Mehra S, Judson BL, Burtness B, Husain Z: Upfront surgery versus definitive chemoradiotherapy in patients with human Papillomavirus-associated oropharyngeal squamous cell cancer. Oral Oncol. 2018 Apr; 2018 Mar 8. PMID: 29598952

Ziegler SJ, Liu C, Landau M, Buzovetsky O, Desimmie BA, Zhao Q, Sasaki T, Burdick RC, Pathak VK, Anderson KS, Xiong Y: Insights into DNA substrate selection by APOBEC3G from structural, biochemical, and functional studies. PLoS One. 2018; 2018 Mar 29. PMID: 29596531

Greiling TM, Dehner C, Chen X, Hughes K, Iñiguez AJ, Boccitto M, Ruiz DZ, Renfroe SC, Vieira SM, Ruff WE, Sim S, Kriegel C, Glanternik J, Chen X, Girardi M, Degnan P, Costenbader KH, Goodman AL, Wolin SL, Kriegel MA: Commensal orthologs of the human autoantigen Ro60 as triggers of autoimmunity in lupus. Sci Transl Med. 2018 Mar 28. PMID: 29593104

Justice AC, Gordon KS, Skanderson M, Edelman EJ, Akgün KM, Gibert CL, Lo Re V 3rd, Rimland D, Womack JA, Wyatt CM, Tate JP, VACS Project Team.: Nonantiretroviral polypharmacy and adverse health outcomes among HIV-infected and uninfected individuals. AIDS. 2018 Mar 27. PMID: 29543653

Crabill E, Schofield WB, Newton HJ, Goodman AL, Roy CR: Dot/Icm-Translocated Proteins Important for Biogenesis of the Coxiella burnetii-Containing Vacuole Identified by Screening of an Effector Mutant Sublibrary. Infect Immun. 2018 Apr; 2018 Mar 22. PMID: 29339460

Ma X, Lu M, Gorman J, Terry DS, Hong X, Zhou Z, Zhao H, Altman RB, Arthos J, Blanchard SC, Kwong PD, Munro JB, Mothes W: HIV-1 Env trimer opens through an asymmetric intermediate in which individual protomers adopt distinct conformations. Elife. 2018 Mar 21; 2018 Mar 21. PMID: 29561264

Warth B, Raffeiner P, Granados A, Huan T, Fang M, Forsberg EM, Benton HP, Goetz L, Johnson CH, Siuzdak G: Metabolomics Reveals that Dietary Xenoestrogens Alter Cellular Metabolism Induced by Palbociclib/Letrozole Combination Cancer Therapy. Cell Chem Biol. 2018 Mar 15; 2018 Jan 11. PMID: 29337187

Bartenschlager R, Baumert TF, Bukh J, Houghton M, Lemon SM, Lindenbach BD, Lohmann V, Moradpour D, Pietschmann T, Rice CM, Thimme R, Wakita T: Critical challenges and emerging opportunities in hepatitis C virus research in an era of potent antiviral therapy: Considerations for scientists and funding agencies. Virus Res. 2018 Mar 15; 2018 Mar 2. PMID: 29477639

Xiao F, Wang S, Barouch-Bentov R, Neveu G, Pu S, Beer M, Schor S, Kumar S, Nicolaescu V, Lindenbach BD, Randall G, Einav S: Interactions between the Hepatitis C Virus Nonstructural 2 Protein and Host Adaptor Proteins 1 and 4 Orchestrate Virus Release. MBio. 2018 Mar 13; 2018 Mar 13. PMID: 29535204

Galán JE, Waksman G: Protein-Injection Machines in Bacteria. Cell. 2018 Mar 8. PMID: 29522749

Spanò S, Galán JE: Taking control: Hijacking of Rab GTPases by intracellular bacterial pathogens. Small GTPases. 2018 Mar 4; 2017 Jul 5. PMID: 28632996

Halpin SN, Carruth EC, Rai RP, Edelman EJ, Fiellin DA, Gibert C, Gordon KS, Huang W, Justice A, Marconi VC, Rimland D, Perkins MM: Complementary and Alternative Medicine Among Persons living with HIV in the Era of Combined Antiretroviral Treatment. AIDS Behav. 2018 Mar. PMID: 28733920

Wang Y, Chen Y, Guan L, Zhang H, Huang Y, Johnson CH, Wu Z, Gonzalez FJ, Yu A, Huang P, Wang Y, Yang S, Chen P, Fan X, Huang M, Bi H: Carnitine palmitoyltransferase 1C regulates cancer cell senescence through mitochondria-associated metabolic reprograming. Cell Death Differ. 2018 Mar; 2018 Jan 9. PMID: 29317762

Farhadian S, Jalbert E, Deng Y, Goetz MB, Park LS, Justice AC, Dubrow R, Emu B: HIV and Age Do Not Synergistically Affect Age-Related T-Cell Markers. J Acquir Immune Defic Syndr. 2018 Mar 1. PMID: 29140874

Cheraghlou S, Kuo P, Mehra S, Yarbrough WG, Judson BL: Untreated oral cavity cancer: Long-term survival and factors associated with treatment refusal. Laryngoscope. 2018 Mar; 2017 Sep 2. PMID: 28865100

Cheraghlou S, Kuo P, Mehra S, Yarbrough WG, Judson BL: Salvage Surgery after Radiation Failure in T1/T2 Larynx Cancer: Outcomes following Total versus Conservation Surgery. Otolaryngol Head Neck Surg. 2018 Mar; 2018 Jan 2. PMID: 29292665

Charkoftaki G, Rattray NJW, Andrén PE, Caprioli RM, Castellino S, Duncan MW, Goodwin RJA, Schey KL, Shahidi-Latham SK, Veselkov KA, Johnson CH, Vasiliou V: Yale School of Public Health Symposium on tissue imaging mass spectrometry: illuminating phenotypic heterogeneity and drug disposition at the molecular level. Hum Genomics. 2018 Feb 27; 2018 Feb 27. PMID: 29482659

St Gelais C, Kim SH, Maksimova VV, Buzovetsky O, Knecht KM, Shepard C, Kim B, Xiong Y, Wu L: A Cyclin-Binding Motif in Human SAMHD1 Is Required for Its HIV-1 Restriction, dNTPase Activity, Tetramer Formation, and Efficient Phosphorylation. J Virol. 2018 Mar 15; 2018 Feb 26. PMID: 29321329

Linehan MM, Dickey TH, Molinari ES, Fitzgerald ME, Potapova O, Iwasaki A, Pyle AM: A minimal RNA ligand for potent RIG-I activation in living mice. Sci Adv. 2018 Feb; 2018 Feb 21. PMID: 29492454

Triplette M, Justice A, Attia EF, Tate J, Brown ST, Goetz MB, Kim JW, Rodriguez-Barradas MC, Hoo GWS, Wongtrakool C, Akgün K, Crothers K: Markers of chronic obstructive pulmonary disease are associated with mortality in people living with HIV. AIDS. 2018 Feb 20. PMID: 29135579

Goedert JJ, Hua X, Bielecka A, Okayasu I, Milne GL, Jones GS, Fujiwara M, Sinha R, Wan Y, Xu X, Ravel J, Shi J, Palm NW, Feigelson HS: Postmenopausal breast cancer and oestrogen associations with the IgA-coated and IgA-noncoated faecal microbiota. Br J Cancer. 2018 Feb 20; 2018 Jan 23. PMID: 29360814

Cheraghlou S, Yu PK, Otremba MD, Park HS, Bhatia A, Zogg CK, Mehra S, Yarbrough WG, Judson BL: Treatment deintensification in human papillomavirus-positive oropharynx cancer: Outcomes from the National Cancer Data Base. Cancer. 2018 Feb 15; 2017 Dec 15. PMID: 29243245

Rattray Z, Dubljevic V, Rattray NJW, Greenwood DL, Johnson CH, Campbell JA, Hansen JE: Re-engineering and evaluation of anti-DNA autoantibody 3E10 for therapeutic applications. Biochem Biophys Res Commun. 2018 Feb 12; 2018 Jan 31. PMID: 29374508

Round JL, Palm NW: Causal effects of the microbiota on immune-mediated diseases. Sci Immunol. 2018 Feb 9. PMID: 29440265

Hayes KE, Barr JA, Xie M, Steitz JA, Martinez I: Immunoprecipitation of Tri-methylated Capped RNA. Bio Protoc. 2018 Feb 5. PMID: 29527542

Vermund SH, Hamilton EL, Griffith SB, Jennings L, Dyer TV, Mayer K, Wheeler D: Recruitment of Underrepresented Minority Researchers into HIV Prevention Research: The HIV Prevention Trials Network Scholars Program. AIDS Res Hum Retroviruses. 2018 Feb; 2017 Dec 20. PMID: 29145745

Eyawo O, McGinnis KA, Justice AC, Fiellin DA, Hahn JA, Williams EC, Gordon AJ, Marshall BDL, Kraemer KL, Crystal S, Gaither JR, Edelman EJ, Bryant KJ, Tate JP, VACS Project team.: Alcohol and Mortality: Combining Self-Reported (AUDIT-C) and Biomarker Detected (PEth) Alcohol Measures Among HIV Infected and Uninfected. J Acquir Immune Defic Syndr. 2018 Feb 1. PMID: 29112041

Liu Y, Vermund SH, Ruan Y, Liu H, Rivet Amico K, Simoni JM, Shepherd BE, Shao Y, Qian HZ: Peer counselling versus standard-of-care on reducing high-risk behaviours among newly diagnosed HIV-positive men who have sex with men in Beijing, China: a randomized intervention study. J Int AIDS Soc. 2018 Feb. PMID: 29430845

Jurado KA, Yockey LJ, Wong PW, Lee S, Huttner AJ, Iwasaki A: Antiviral CD8 T cells induce Zika-virus-associated paralysis in mice. Nat Microbiol. 2018 Feb; 2017 Nov 20. PMID: 29158604

Zhao C, Liu F, Pyle AM: An ultraprocessive, accurate reverse transcriptase encoded by a metazoan group II intron. RNA. 2018 Feb; 2017 Nov 6. PMID: 29109157

Justice AC, Erlandson KM, Hunt PW, Landay A, Miotti P, Tracy RP: Can Biomarkers Advance HIV Research and Care in the Antiretroviral Therapy Era? J Infect Dis. 2018 Jan 30. PMID: 29165684

Marr M, D'Abramo A, Pittman N, Agbandje-McKenna M, Cotmore SF, Tattersall P: Optimizing the Targeting of Mouse Parvovirus 1 to Murine Melanoma Selects for Recombinant Genomes and Novel Mutations in the Viral Capsid Gene. Viruses. 2018 Jan 30; 2018 Jan 30. PMID: 29385689

Buzovetsky O, Tang C, Knecht KM, Antonucci JM, Wu L, Ji X, Xiong Y: The SAM domain of mouse SAMHD1 is critical for its activation and regulation. Nat Commun. 2018 Jan 29; 2018 Jan 29. PMID: 29379009

Rattray NJW, Deziel NC, Wallach JD, Khan SA, Vasiliou V, Ioannidis JPA, Johnson CH: Beyond genomics: understanding exposotypes through metabolomics. Hum Genomics. 2018 Jan 26; 2018 Jan 26. PMID: 29373992

Kudalkar SN, Beloor J, Quijano E, Spasov KA, Lee WG, Cisneros JA, Saltzman WM, Kumar P, Jorgensen WL, Anderson KS: From in silico hit to long-acting late-stage preclinical candidate to combat HIV-1 infection. Proc Natl Acad Sci U S A. 2018 Jan 23; 2017 Dec 26. PMID: 29279368

Bensley KM, McGinnis KA, Fiellin DA, Gordon AJ, Kraemer KL, Bryant KJ, Edelman EJ, Crystal S, Gaither JR, Korthuis PT, Marshall BDL, Ornelas IJ, Chan KCG, Dombrowski JC, Fortney JC, Justice AC, Williams EC: Racial/ethnic differences in the association between alcohol use and mortality among men living with HIV. Addict Sci Clin Pract. 2018 Jan 22; 2018 Jan 22. PMID: 29353555

Heimer R, Binka M, Koester S, Grund JC, Patel A, Paintsil E, Lindenbach BD: Recovery of Infectious Hepatitis C Virus From Injection Paraphernalia: Implications for Prevention Programs Serving People Who Inject Drugs. J Infect Dis. 2018 Jan 17. PMID: 28968665

Wong VC, Bass VL, Bullock ME, Chavali AK, Lee REC, Mothes W, Gaudet S, Miller-Jensen K: NF-κB-Chromatin Interactions Drive Diverse Phenotypes by Modulating Transcriptional Noise. Cell Rep. 2018 Jan 16. PMID: 29346759

Fowler CC, Galán JE: Decoding a Salmonella Typhi Regulatory Network that Controls Typhoid Toxin Expression within Human Cells. Cell Host Microbe. 2018 Jan 10. PMID: 29324231

Rosen CE, Palm NW: Navigating the Microbiota Seas: Triangulation Finds a Way Forward. Cell Host Microbe. 2018 Jan 10. PMID: 29324223

Barouch-Bentov R, Neveu G, Xiao F, Beer M, Bekerman E, Schor S, Campbell J, Boonyaratanakornkit J, Lindenbach B, Lu A, Jacob Y, Einav S: Erratum for Barouch-Bentov et al., "Hepatitis C Virus Proteins Interact with the Endosomal Sorting Complex Required for Transport (ESCRT) Machinery via Ubiquitination To Facilitate Viral Envelopment". MBio. 2018 Jan 9; 2018 Jan 9. PMID: 29317514

Herschhorn A, Gu C, Moraca F, Ma X, Farrell M, Smith AB 3rd, Pancera M, Kwong PD, Schön A, Freire E, Abrams C, Blanchard SC, Mothes W, Sodroski JG: Publisher Correction: The β20-β21 of gp120 is a regulatory switch for HIV-1 Env conformational transitions. Nat Commun. 2018 Jan 8; 2018 Jan 8. PMID: 29311557

Yockey LJ, Jurado KA, Arora N, Millet A, Rakib T, Milano KM, Hastings AK, Fikrig E, Kong Y, Horvath TL, Weatherbee S, Kliman HJ, Coyne CB, Iwasaki A: Type I interferons instigate fetal demise after Zika virus infection. Sci Immunol. 2018 Jan 5. PMID: 29305462

Liu Y, Vermund SH, Ruan Y, Liu H, Zhang C, Yin L, Shao Y, Qian HZ: HIV testing and sexual risks among migrant men who have sex with men: findings from a large cross-sectional study in Beijing, China. AIDS Care. 2018 Jan; 2017 Sep 25. PMID: 28944685

Caniglia EC, Phillips A, Porter K, Sabin CA, Winston A, Logan R, Gill J, Vandenhende MA, Barger D, Lodi S, Moreno S, Arribas JR, Pacheco A, Cardoso SW, Chrysos G, Gogos C, Abgrall S, Costagliola D, Meyer L, Seng R, van Sighem A, Reiss P, Muga R, Hoyos SP, Braun D, Hauser C, Barrufet P, Leyes M, Tate J, Justice A, Hernán MA: Commonly Prescribed Antiretroviral Therapy Regimens and Incidence of AIDS-Defining Neurological Conditions. J Acquir Immune Defic Syndr. 2018 Jan 1. PMID: 28991888

Pettit AC, Giganti MJ, Ingle SM, May MT, Shepherd BE, Gill MJ, Fätkenheuer G, Abgrall S, Saag MS, Del Amo J, Justice AC, Miro JM, Cavasinni M, Dabis F, Monforte AD, Reiss P, Guest J, Moore D, Shepherd L, Obel N, Crane HM, Smith C, Teira R, Zangerle R, Sterne JA, Sterling TR, Antiretroviral Therapy Cohort Collaboration (ART-CC) investigators.: Increased non-AIDS mortality among persons with AIDS-defining events after antiretroviral therapy initiation. J Int AIDS Soc. 2018 Jan. PMID: 29334197

Kaplan DE, Mehta R, D'Addeo K, Valderrama A, Taddei TH, Sorafenib for Hepatocellular carcinomA in VEterans (SHAVE) Study Investigators.: Sorafenib prescribed by gastroenterologists and hepatologists for hepatocellular carcinoma: A retrospective, multi-institutional cohort study. Medicine (Baltimore). 2018 Jan. PMID: 29369224

Loganadane G, Kelly JR, Lee NC, Kann BH, Mahajan A, Hansen JE, Belkacémi Y, Yarbrough W, Husain ZA: Incidence of radiographically occult nodal metastases in HPV+ oropharyngeal carcinoma: Implications for reducing elective nodal coverage. Pract Radiat Oncol. 2018 Nov - Dec; 2018 Mar 27. PMID: 29730282

Yue Y, Coskun AK, Jawanda N, Auer J, Sutton RE: Differential interaction between human and murine Crm1 and lentiviral Rev proteins. Virology. 2018 Jan 1; 2017 Oct 10. PMID: 29028476

Zhou T, Ren X, Adams RL, Pyle AM: NS3 from Hepatitis C Virus Strain JFH-1 Is an Unusually Robust Helicase That Is Primed To Bind and Unwind Viral RNA. J Virol. 2018 Jan 1; 2017 Dec 14. PMID: 29070684

Zhang X, Hu Y, Justice AC, Li B, Wang Z, Zhao H, Krystal JH, Xu K: DNA methylation signatures of illicit drug injection and hepatitis C are associated with HIV frailty. Nat Commun. 2017 Dec 21; 2017 Dec 21. PMID: 29269866

Denolly S, Mialon C, Bourlet T, Amirache F, Penin F, Lindenbach B, Boson B, Cosset FL: The amino-terminus of the hepatitis C virus (HCV) p7 viroporin and its cleavage from glycoprotein E2-p7 precursor determine specific infectivity and secretion levels of HCV particle types. PLoS Pathog. 2017 Dec; 2017 Dec 18. PMID: 29253880

Molony RD, Nguyen JT, Kong Y, Montgomery RR, Shaw AC, Iwasaki A: Aging impairs both primary and secondary RIG-I signaling for interferon induction in human monocytes. Sci Signal. 2017 Dec 12; 2017 Dec 12. PMID: 29233916

Johnson CH, Athersuch TJ, Collman GW, Dhungana S, Grant DF, Jones DP, Patel CJ, Vasiliou V: Yale school of public health symposium on lifetime exposures and human health: the exposome; summary and future reflections. Hum Genomics. 2017 Dec 8; 2017 Dec 8. PMID: 29221465

Gülden E, Palm N, Herold KC: MAIT Cells: A Link between Gut Integrity and Type 1 Diabetes. Cell Metab. 2017 Dec 5. PMID: 29211981

Rosen CE, Palm NW: Functional Classification of the Gut Microbiota: The Key to Cracking the Microbiota Composition Code: Functional classifications of the gut microbiota reveal previously hidden contributions of indigenous gut bacteria to human health and disease. Bioessays. 2017 Dec; 2017 Oct 4. PMID: 28976007

Biktasova A, Hajek M, Sewell A, Gary C, Bellinger G, Deshpande HA, Bhatia A, Burtness B, Judson B, Mehra S, Yarbrough WG, Issaeva N: Demethylation Therapy as a Targeted Treatment for Human Papillomavirus-Associated Head and Neck Cancer. Clin Cancer Res. 2017 Dec 1; 2017 Sep 15. PMID: 28916527

Zhao C, Pyle AM: The group II intron maturase: a reverse transcriptase and splicing factor go hand in hand. Curr Opin Struct Biol. 2017 Dec; 2017 May 18. PMID: 28528306

Vermund SH: Control of HIV epidemic: improve access to testing and ART. Lancet HIV. 2017 Dec; 2017 Aug 31. PMID: 28867268

Gao X, Deng L, Stack G, Yu H, Chen X, Naito-Matsui Y, Varki A, Galán JE: Author Correction: Evolution of host adaptation in the Salmonella typhoid toxin. Nat Microbiol. 2017 Dec. PMID: 29093550

Gao X, Deng L, Stack G, Yu H, Chen X, Naito-Matsui Y, Varki A, Galán JE: Evolution of host adaptation in the Salmonella typhoid toxin. Nat Microbiol. 2017 Dec; 2017 Oct 9. PMID: 28993610

Shames SR, Liu L, Havey JC, Schofield WB, Goodman AL, Roy CR: Multiple Legionella pneumophila effector virulence phenotypes revealed through high-throughput analysis of targeted mutant libraries. Proc Natl Acad Sci U S A. 2017 Nov 28; 2017 Nov 13. PMID: 29133401

Buzovetsky O, Kwon Y, Pham NT, Kim C, Ira G, Sung P, Xiong Y: Role of the Pif1-PCNA Complex in Pol δ-Dependent Strand Displacement DNA Synthesis and Break-Induced Replication. Cell Rep. 2017 Nov 14. PMID: 29141206

Warth B, Spangler S, Fang M, Johnson CH, Forsberg EM, Granados A, Martin RL, Domingo-Almenara X, Huan T, Rinehart D, Montenegro-Burke JR, Hilmers B, Aisporna A, Hoang LT, Uritboonthai W, Benton HP, Richardson SD, Williams AJ, Siuzdak G: Exposome-Scale Investigations Guided by Global Metabolomics, Pathway Analysis, and Cognitive Computing. Anal Chem. 2017 Nov 7; 2017 Oct 9. PMID: 28945073

Herndler-Brandstetter D, Shan L, Yao Y, Stecher C, Plajer V, Lietzenmayer M, Strowig T, de Zoete MR, Palm NW, Chen J, Blish CA, Frleta D, Gurer C, Macdonald LE, Murphy AJ, Yancopoulos GD, Montgomery RR, Flavell RA: Humanized mouse model supports development, function, and tissue residency of human natural killer cells. Proc Natl Acad Sci U S A. 2017 Nov 7; 2017 Oct 25. PMID: 29078283

Gülden E, Vudattu NK, Deng S, Preston-Hurlburt P, Mamula M, Reed JC, Mohandas S, Herold BC, Torres R, Vieira SM, Lim B, Herazo-Maya JD, Kriegel M, Goodman AL, Cotsapas C, Herold KC: Microbiota control immune regulation in humanized mice. JCI Insight. 2017 Nov 2; 2017 Nov 2. PMID: 29093268

Lodi S, Costagliola D, Sabin C, Del Amo J, Logan R, Abgrall S, Reiss P, van Sighem A, Jose S, Blanco JR, Hernando V, Bucher HC, Kovari H, Segura F, Ambrosioni J, Gogos CA, Pantazis N, Dabis F, Vandenhende MA, Meyer L, Seng R, Gill MJ, Krentz H, Phillips AN, Porter K, Grinsztejn B, Pacheco AG, Muga R, Tate J, Justice A, Hernán MA: Effect of Immediate Initiation of Antiretroviral Treatment in HIV-Positive Individuals Aged 50 Years or Older. J Acquir Immune Defic Syndr. 2017 Nov 1. PMID: 28746165

Reiss KA, Yu S, Mamtani R, Mehta R, D'Addeo K, Wileyto EP, Taddei TH, Kaplan DE: Starting Dose of Sorafenib for the Treatment of Hepatocellular Carcinoma: A Retrospective, Multi-Institutional Study. J Clin Oncol. 2017 Nov 1; 2017 Sep 5. PMID: 28872925

Lipovsky A, Erden A, Kanaya E, Zhang W, Crite M, Bradfield C, MacMicking J, DiMaio D, Schoggins JW, Iwasaki A: The cellular endosomal protein stannin inhibits intracellular trafficking of human papillomavirus during virus entry. J Gen Virol. 2017 Nov; 2017 Oct 23. PMID: 29058661

Mattocks KM, Gibert C, Fiellin D, Fiellin LE, Jamison A, Brown A, Justice AC: Mistrust and Endorsement of Human Immunodeficiency Virus Conspiracy Theories Among Human Immunodeficiency Virus-Infected African American Veterans. Mil Med. 2017 Nov. PMID: 29087885

Jurado KA, Iwasaki A: Zika virus targets blood monocytes. Nat Microbiol. 2017 Nov. PMID: 29070824

Schwam ZG, Michaelides E, Schwam JR, Kuo P, Hajek MA, Judson BL, Schutt C: Comparing 30-Day Morbidity and Mortality in Pediatric and Adult Otologic Surgery. Otolaryngol Head Neck Surg. 2017 Nov; 2017 May 2. PMID: 28463634

Gibb DR, Liu J, Santhanakrishnan M, Natarajan P, Madrid DJ, Patel S, Eisenbarth SC, Tormey CA, Stowell SR, Iwasaki A, Hendrickson JE: B cells require Type 1 interferon to produce alloantibodies to transfused KEL-expressing red blood cells in mice. Transfusion. 2017 Nov; 2017 Aug 23. PMID: 28836263

Johnson CH, Santidrian AF, LeBoeuf SE, Kurczy ME, Rattray NJW, Rattray Z, Warth B, Ritland M, Hoang LT, Loriot C, Higa J, Hansen JE, Felding BH, Siuzdak G: Metabolomics guided pathway analysis reveals link between cancer metastasis, cholesterol sulfate, and phospholipids. Cancer Metab. 2017; 2017 Oct 31. PMID: 29093815

Schutt CA, Mirandola L, Figueroa JA, Nguyen DD, Cordero J, Bumm K, Judson BL, Chiriva-Internati M: The cancer-testis antigen, sperm protein 17, a new biomarker and immunological target in head and neck squamous cell carcinoma. Oncotarget. 2017 Nov 21; 2017 Oct 31. PMID: 29245977

Pittman N, Misseldine A, Geilen L, Halder S, Smith JK, Kurian J, Chipman P, Janssen M, Mckenna R, Baker TS, D'Abramo A Jr, Cotmore S, Tattersall P, Agbandje-McKenna M: Atomic Resolution Structure of the Oncolytic Parvovirus LuIII by Electron Microscopy and 3D Image Reconstruction. Viruses. 2017 Oct 30; 2017 Oct 30. PMID: 29084163

Galvani AP, Durham DP, Vermund SH, Fitzpatrick MC: California Universal Health Care Bill: an economic stimulus and life-saving proposal. Lancet. 2017 Oct 28; 2017 Sep 17. PMID: 28923467

Herschhorn A, Gu C, Moraca F, Ma X, Farrell M, Smith AB 3rd, Pancera M, Kwong PD, Schön A, Freire E, Abrams C, Blanchard SC, Mothes W, Sodroski JG: The β20-β21 of gp120 is a regulatory switch for HIV-1 Env conformational transitions. Nat Commun. 2017 Oct 19; 2017 Oct 19. PMID: 29051495

Zhao W, Steinfeld JB, Liang F, Chen X, Maranon DG, Jian Ma C, Kwon Y, Rao T, Wang W, Sheng C, Song X, Deng Y, Jimenez-Sainz J, Lu L, Jensen RB, Xiong Y, Kupfer GM, Wiese C, Greene EC, Sung P: BRCA1-BARD1 promotes RAD51-mediated homologous DNA pairing. Nature. 2017 Oct 19; 2017 Oct 4. PMID: 28976962

Byrne DD, Tate JP, Forde KA, Lim JK, Goetz MB, Rimland D, Rodriguez-Barradas MC, Butt AA, Gibert CL, Brown ST, Bedimo R, Freiberg MS, Justice AC, Kostman JR, Roy JA, Lo Re V 3rd: Risk of Acute Liver Injury After Statin Initiation by Human Immunodeficiency Virus and Chronic Hepatitis C Virus Infection Status. Clin Infect Dis. 2017 Oct 16. PMID: 29020184

Chase AR, Laudermilch E, Wang J, Shigematsu H, Yokoyama T, Schlieker C: Dynamic functional assembly of the Torsin AAA+ ATPase and its modulation by LAP1. Mol Biol Cell. 2017 Oct 15; 2017 Aug 16. PMID: 28814508

Eksmond U, Jenkins B, Merkenschlager J, Mothes W, Stoye JP, Kassiotis G: Mutation of the Putative Immunosuppressive Domain of the Retroviral Envelope Glycoprotein Compromises Infectivity. J Virol. 2017 Nov 1; 2017 Oct 13. PMID: 28814524

Ren X, Gelinas AD, von Carlowitz I, Janjic N, Pyle AM: Structural basis for IL-1α recognition by a modified DNA aptamer that specifically inhibits IL-1α signaling. Nat Commun. 2017 Oct 9; 2017 Oct 9. PMID: 28993621

Stockwell BR, Friedmann Angeli JP, Bayir H, Bush AI, Conrad M, Dixon SJ, Fulda S, Gascón S, Hatzios SK, Kagan VE, Noel K, Jiang X, Linkermann A, Murphy ME, Overholtzer M, Oyagi A, Pagnussat GC, Park J, Ran Q, Rosenfeld CS, Salnikow K, Tang D, Torti FM, Torti SV, Toyokuni S, Woerpel KA, Zhang DD: Ferroptosis: A Regulated Cell Death Nexus Linking Metabolism, Redox Biology, and Disease. Cell. 2017 Oct 5. PMID: 28985560

Vilborg A, Sabath N, Wiesel Y, Nathans J, Levy-Adam F, Yario TA, Steitz JA, Shalgi R: Comparative analysis reveals genomic features of stress-induced transcriptional readthrough. Proc Natl Acad Sci U S A. 2017 Oct 3; 2017 Sep 19. PMID: 28928151

Barbiero FJ, Huttner AJ, Judson BL, Baehring JM: Leiomyosarcoma of the infratemporal fossa with perineurial spread along the right mandibular nerve: a case report. CNS Oncol. 2017 Oct; 2017 Oct 9. PMID: 28990793

So-Armah KA, Lim JK, Lo Re V, Tate JP, Chang CH, Butt AA, Gibert CL, Rimland D, Marconi VC, Goetz MB, Rodriguez-Barradas MC, Budoff MJ, Tindle HA, Samet JH, Justice AC, Freiberg MS, Veterans Aging Cohort Study Project Team.: FIB-4 stage of liver fibrosis predicts incident heart failure among HIV-infected and uninfected patients. Hepatology. 2017 Oct; 2017 Aug 30. PMID: 28543215

Bledsoe TJ, Park HS, Stahl JM, Yarbrough WG, Burtness BA, Decker RH, Husain ZA: Hypofractionated Radiotherapy for Patients with Early-Stage Glottic Cancer: Patterns of Care and Survival. J Natl Cancer Inst. 2017 Oct 1. PMID: 28521361

Lo Re V Rd, Zeldow B, Kallan MJ, Tate JP, Carbonari DM, Hennessy S, Kostman JR, Lim JK, Goetz MB, Gross R, Justice AC, Roy JA: Risk of liver decompensation with cumulative use of mitochondrial toxic nucleoside analogues in HIV/hepatitis C virus coinfection. Pharmacoepidemiol Drug Saf. 2017 Oct; 2017 Jul 19. PMID: 28722244

Subramanian S, Organtini LJ, Grossman A, Domeier PP, Cifuente JO, Makhov AM, Conway JF, D'Abramo A Jr, Cotmore SF, Tattersall P, Hafenstein S: Cryo-EM maps reveal five-fold channel structures and their modification by gatekeeper mutations in the parvovirus minute virus of mice (MVM) capsid. Virology. 2017 Oct; 2017 Jul 24. PMID: 28750325

Greider C, Hopkins N, Steitz J, Amon A, Asai D, Barres B, Bass B, Bassler B, Birgeneau R, Bjorkman P, Botchan M, Brugge J, Cech T, Colwell R, Craig N, deLange T, Eisen M, Gottesman S, Green R, Handelsman J, Kimble J, King MC, Lehmann R, Marder E, Mullins D, O'Shea E, Schmid S, Seydoux G, Spradling A, Storz G, Szostak J, Telesnitsky A, Tilghman S, Tjian R, Vale R, Wolberger C, Zakian V: Not just Salk. Science. 2017 Sep 15. PMID: 28912235

Verster AJ, Ross BD, Radey MC, Bao Y, Goodman AL, Mougous JD, Borenstein E: The Landscape of Type VI Secretion across Human Gut Microbiomes Reveals Its Role in Community Composition. Cell Host Microbe. 2017 Sep 13. PMID: 28910638

Tan WJT, Song L, Graham M, Schettino A, Navaratnam D, Yarbrough WG, Santos-Sacchi J, Ivanova AV: Novel Role of the Mitochondrial Protein Fus1 in Protection from Premature Hearing Loss via Regulation of Oxidative Stress and Nutrient and Energy Sensing Pathways in the Inner Ear. Antioxid Redox Signal. 2017 Sep 10; 2017 Mar 9. PMID: 28135838

He L, Steinocher H, Shelar A, Cohen EB, Heim EN, Kragelund BB, Grigoryan G, DiMaio D: Single methyl groups can act as toggle switches to specify transmembrane Protein-protein interactions. Elife. 2017 Sep 4; 2017 Sep 4. PMID: 28869036

Edelman EJ, Maisto SA, Hansen NB, Cutter CJ, Dziura J, Fiellin LE, O'Connor PG, Bedimo R, Gibert C, Marconi VC, Rimland D, Rodriguez-Barradas MC, Simberkoff MS, Justice AC, Bryant KJ, Fiellin DA: Corrigendum to "The Starting Treatment for Ethanol in Primary care Trials (STEP Trials): Protocol for three parallel multi-site stepped care effectiveness studies for unhealthy alcohol use in HIV-positive patients" [Contemp. Clin. Trials 52 (2017) 80-90]. Contemp Clin Trials. 2017 Sep; 2017 Jul 14. PMID: 28712767

Bastian LA, Brandt CA, Justice AC: Measuring Multimorbidity: A Risky Business. J Gen Intern Med. 2017 Sep. PMID: 28653231

Karabadzhak AG, Petti LM, Barrera FN, Edwards APB, Moya-Rodríguez A, Polikanov YS, Freites JA, Tobias DJ, Engelman DM, DiMaio D: Two transmembrane dimers of the bovine papillomavirus E5 oncoprotein clamp the PDGF β receptor in an active dimeric conformation. Proc Natl Acad Sci U S A. 2017 Aug 29; 2017 Aug 14. PMID: 28808001

Nagarajan A, Dogra SK, Sun L, Gandotra N, Ho T, Cai G, Cline G, Kumar P, Cowles RA, Wajapeyee N: Paraoxonase 2 Facilitates Pancreatic Cancer Growth and Metastasis by Stimulating GLUT1-Mediated Glucose Transport. Mol Cell. 2017 Aug 17; 2017 Aug 10. PMID: 28803777

Taylor BS, So-Armah K, Tate JP, Marconi VC, Koethe JR, Bedimo RJ, Butt AA, Gibert CL, Goetz MB, Rodriguez-Barradas MC, Womack JA, Gerschenson M, Lo Re V 3rd, Rimland D, Yin MT, Leaf D, Tracy RP, Justice AC, Freiberg MS: HIV and Obesity Comorbidity Increase Interleukin 6 but Not Soluble CD14 or D-Dimer. J Acquir Immune Defic Syndr. 2017 Aug 15. PMID: 28696344

Drozd DR, Kitahata MM, Althoff KN, Zhang J, Gange SJ, Napravnik S, Burkholder GA, Mathews WC, Silverberg MJ, Sterling TR, Heckbert SR, Budoff MJ, Van Rompaey S, Delaney JAC, Wong C, Tong W, Palella FJ, Elion RA, Martin JN, Brooks JT, Jacobson LP, Eron JJ, Justice AC, Freiberg MS, Klein DB, Post WS, Saag MS, Moore RD, Crane HM: Increased Risk of Myocardial Infarction in HIV-Infected Individuals in North America Compared With the General Population. J Acquir Immune Defic Syndr. 2017 Aug 15. PMID: 28520615

Njei B, Taddei TH: Pursuing a Gastroenterology Fellowship as a Foreign Medical Graduate. Dig Dis Sci. 2017 Aug. PMID: 28555326

Dubrow R, Qin L, Lin H, Hernández-Ramírez RU, Neugebauer RS, Leyden W, Althoff KN, Achenbach CJ, Hessol NA, Modur SP, DʼSouza G, Bosch RJ, Grover S, Horberg MA, Kitahata MM, Mayor AM, Novak RM, Rabkin CS, Sterling TR, Goedert JJ, Justice AC, Engels EA, Moore RD, Silverberg MJ, North American AIDS Cohort Collaboration on Research and Design of the International Epidemiologic Databases to Evaluate AIDS.: Association of CD4+ T-cell Count, HIV-1 RNA Viral Load, and Antiretroviral Therapy With Kaposi Sarcoma Risk Among HIV-infected Persons in the United States and Canada. J Acquir Immune Defic Syndr. 2017 Aug 1. PMID: 28394855

Gibb DR, Liu J, Natarajan P, Santhanakrishnan M, Madrid DJ, Eisenbarth SC, Zimring JC, Iwasaki A, Hendrickson JE: Type I IFN Is Necessary and Sufficient for Inflammation-Induced Red Blood Cell Alloimmunization in Mice. J Immunol. 2017 Aug 1; 2017 Jun 19. PMID: 28630094

Tran Vu Thieu N, Trinh Van T, Tran Tuan A, Klemm EJ, Nguyen Ngoc Minh C, Voong Vinh P, Pham Thanh D, Ho Ngoc Dan T, Pham Duc T, Langat P, Martin LB, Galan J, Liang L, Felgner PL, Davies DH, de Jong HK, Maude RR, Fukushima M, Wijedoru L, Ghose A, Samad R, Dondorp AM, Faiz A, Darton TC, Pollard AJ, Thwaites GE, Dougan G, Parry CM, Baker S: An evaluation of purified Salmonella Typhi protein antigens for the serological diagnosis of acute typhoid fever. J Infect. 2017 Aug; 2017 May 25. PMID: 28551371

Kelly JR, Park HS, An Y, Contessa JN, Yarbrough WG, Burtness BA, Decker R, Husain Z: Comparison of Survival Outcomes Among Human Papillomavirus-Negative cT1-2 N1-2b Patients With Oropharyngeal Squamous Cell Cancer Treated With Upfront Surgery vs Definitive Chemoradiation Therapy: An Observational Study. JAMA Oncol. 2017 Aug 1. PMID: 28056116

Sasai M, Sakaguchi N, Ma JS, Nakamura S, Kawabata T, Bando H, Lee Y, Saitoh T, Akira S, Iwasaki A, Standley DM, Yoshimori T, Yamamoto M: Essential role for GABARAP autophagy proteins in interferon-inducible GTPase-mediated host defense. Nat Immunol. 2017 Aug; 2017 Jun 12. PMID: 28604719

Fujiwara RJT, Burtness B, Husain ZA, Judson BL, Bhatia A, Sasaki CT, Yarbrough WG, Mehra S: Treatment guidelines and patterns of care in oral cavity squamous cell carcinoma: Primary surgical resection vs. nonsurgical treatment. Oral Oncol. 2017 Aug; 2017 Jun 23. PMID: 28688680

Stoneham CA, Singh R, Jia X, Xiong Y, Guatelli J: Endocytic activity of HIV-1 Vpu: Phosphoserine-dependent interactions with clathrin adaptors. Traffic. 2017 Aug; 2017 Jun 27. PMID: 28504462

Youn B, Shireman TI, Lee Y, Galárraga O, Rana AI, Justice AC, Wilson IB: Ten-year trends in antiretroviral therapy persistence among US Medicaid beneficiaries. AIDS. 2017 Jul 31. PMID: 28700393

Wadia R, Shifman M, Levin FL, Marenco L, Brandt CA, Cheung KH, Taddei T, Krauthammer M: A Clinical Decision Support System for Monitoring Post-Colonoscopy Patient Follow-Up and Scheduling. AMIA Jt Summits Transl Sci Proc. 2017; 2017 Jul 26. PMID: 28815144

Foli Y, Ghebremichael M, Li M, Paintsil E: Upregulation of Apoptosis Pathway Genes in Peripheral Blood Mononuclear Cells of HIV-Infected Individuals with Antiretroviral Therapy-Associated Mitochondrial Toxicity. Antimicrob Agents Chemother. 2017 Aug; 2017 Jul 25. PMID: 28584150

Schlick T, Pyle AM: Opportunities and Challenges in RNA Structural Modeling and Design. Biophys J. 2017 Jul 25; 2017 Feb 2. PMID: 28162235

Hannemann S, Galán JE: Salmonella enterica serovar-specific transcriptional reprogramming of infected cells. PLoS Pathog. 2017 Jul; 2017 Jul 24. PMID: 28742135

Chen YG, Kim MV, Chen X, Batista PJ, Aoyama S, Wilusz JE, Iwasaki A, Chang HY: Sensing Self and Foreign Circular RNAs by Intron Identity. Mol Cell. 2017 Jul 20; 2017 Jun 15. PMID: 28625551

Rajeevan N, Niehoff KM, Charpentier P, Levin FL, Justice A, Brandt CA, Fried TR, Miller PL: Utilizing patient data from the veterans administration electronic health record to support web-based clinical decision support: informatics challenges and issues from three clinical domains. BMC Med Inform Decis Mak. 2017 Jul 19; 2017 Jul 19. PMID: 28724368

Ornaghi S, Hsieh LS, Bordey A, Vergani P, Paidas MJ, van den Pol AN: Valnoctamide Inhibits Cytomegalovirus Infection in Developing Brain and Attenuates Neurobehavioral Dysfunctions and Brain Abnormalities. J Neurosci. 2017 Jul 19; 2017 Jun 19. PMID: 28630251

An Y, Park HS, Kelly JR, Stahl JM, Yarbrough WG, Burtness BA, Contessa JN, Decker RH, Koshy M, Husain ZA: The prognostic value of extranodal extension in human papillomavirus-associated oropharyngeal squamous cell carcinoma. Cancer. 2017 Jul 15; 2017 Mar 21. PMID: 28323338

Wong P, Iwasaki A: RAB15 empowers dendritic cells to drive antiviral immunity. Sci Immunol. 2017 Jul 7. PMID: 28783705

Lu G, Xu Y, Zhang K, Xiong Y, Li H, Cui L, Wang X, Lou J, Zhai Y, Sun F, Zhang XC: Crystal structure of E. coli apolipoprotein N-acyl transferase. Nat Commun. 2017 Jul 4; 2017 Jul 4. PMID: 28885614

Greene M, Justice AC, Covinsky KE: Assessment of geriatric syndromes and physical function in people living with HIV. Virulence. 2017 Jul 4; 2016 Oct 7. PMID: 27715455

Ruggles KV, Fang Y, Tate J, Mentor SM, Bryant KJ, Fiellin DA, Justice AC, Braithwaite RS: What are the Patterns Between Depression, Smoking, Unhealthy Alcohol Use, and Other Substance Use Among Individuals Receiving Medical Care? A Longitudinal Study of 5479 Participants. AIDS Behav. 2017 Jul. PMID: 27475945

Panaccione A, Guo Y, Yarbrough WG, Ivanov SV: Expression Profiling of Clinical Specimens Supports the Existence of Neural Progenitor-Like Stem Cells in Basal Breast Cancers. Clin Breast Cancer. 2017 Jul; 2017 Jan 27. PMID: 28216417

Butt AA, Ren Y, Lo Re V 3rd, Taddei TH, Kaplan DE: Comparing Child-Pugh, MELD, and FIB-4 to Predict Clinical Outcomes in Hepatitis C Virus-Infected Persons: Results From ERCHIVES. Clin Infect Dis. 2017 Jul 1. PMID: 28369305

Sarko KA, Blevins M, Ahonkhai AA, Audet CM, Moon TD, Gebi UI, Gana AM, Wester CW, Vermund SH, Aliyu MH: HIV status disclosure, facility-based delivery and postpartum retention of mothers in a prevention clinical trial in rural Nigeria. Int Health. 2017 Jul 1. PMID: 28810669

Vilarinho S, Erson-Omay EZ, Mitchell-Richards K, Cha C, Nelson-Williams C, Harmancı AS, Yasuno K, Günel M, Taddei TH: Exome analysis of the evolutionary path of hepatocellular adenoma-carcinoma transition, vascular invasion and brain dissemination. J Hepatol. 2017 Jul; 2017 Mar 18. PMID: 28323122

Zhu S, Ding S, Wang P, Wei Z, Pan W, Palm NW, Yang Y, Yu H, Li HB, Wang G, Lei X, de Zoete MR, Zhao J, Zheng Y, Chen H, Zhao Y, Jurado KA, Feng N, Shan L, Kluger Y, Lu J, Abraham C, Fikrig E, Greenberg HB, Flavell RA: Nlrp9b inflammasome restricts rotavirus infection in intestinal epithelial cells. Nature. 2017 Jun 29; 2017 Jun 21. PMID: 28636595

Gonzalo-Gil E, Ikediobi U, Sutton RE: Mechanisms of Virologic Control and Clinical Characteristics of HIV+ Elite/Viremic Controllers. Yale J Biol Med. 2017 Jun; 2017 Jun 23. PMID: 28656011

Martinez I, Hayes KE, Barr JA, Harold AD, Xie M, Bukhari SIA, Vasudevan S, Steitz JA, DiMaio D: An Exportin-1-dependent microRNA biogenesis pathway during human cell quiescence. Proc Natl Acad Sci U S A. 2017 Jun 20; 2017 Jun 5. PMID: 28584122

Thiemann S, Smit N, Roy U, Lesker TR, Gálvez EJC, Helmecke J, Basic M, Bleich A, Goodman AL, Kalinke U, Flavell RA, Erhardt M, Strowig T: Enhancement of IFNγ Production by Distinct Commensals Ameliorates Salmonella-Induced Disease. Cell Host Microbe. 2017 Jun 14. PMID: 28618267

Galvani AP, Fitzpatrick MC, Vermund SH, Singer BH: Fund global health: Save lives and money. Science. 2017 Jun 9. PMID: 28596330

Zhang Y, Lara-Tejero M, Bewersdorf J, Galán JE: Visualization and characterization of individual type III protein secretion machines in live bacteria. Proc Natl Acad Sci U S A. 2017 Jun 6; 2017 May 22. PMID: 28533372

Fink SL, Jayewickreme TR, Molony RD, Iwawaki T, Landis CS, Lindenbach BD, Iwasaki A: IRE1α promotes viral infection by conferring resistance to apoptosis. Sci Signal. 2017 Jun 6; 2017 Jun 6. PMID: 28588082

Marshall BDL, Tate JP, McGinnis KA, Bryant KJ, Cook RL, Edelman EJ, Gaither JR, Kahler CW, Operario D, Fiellin DA, Justice AC: Long-term alcohol use patterns and HIV disease severity. AIDS. 2017 Jun 1. PMID: 28492393

Akgün KM: Palliative and End-of-Life Care for Patients with Malignancy. Clin Chest Med. 2017 Jun. PMID: 28477645

Adams RL, Pirakitikulr N, Pyle AM: Functional RNA structures throughout the Hepatitis C Virus genome. Curr Opin Virol. 2017 Jun; 2017 May 13. PMID: 28511116

Rattray NJW, Charkoftaki G, Rattray Z, Hansen JE, Vasiliou V, Johnson CH: Environmental influences in the etiology of colorectal cancer: the premise of metabolomics. Curr Pharmacol Rep. 2017 Jun; 2017 Apr 7. PMID: 28642837

Uraki R, Jurado KA, Hwang J, Szigeti-Buck K, Horvath TL, Iwasaki A, Fikrig E: Fetal Growth Restriction Caused by Sexual Transmission of Zika Virus in Mice. J Infect Dis. 2017 Jun 1. PMID: 28472297

Caniglia EC, Cain LE, Sabin CA, Robins JM, Logan R, Abgrall S, Mugavero MJ, Hernández-Díaz S, Meyer L, Seng R, Drozd DR, Seage GR 3rd, Bonnet F, Dabis F, Moore RD, Reiss P, van Sighem A, Mathews WC, Del Amo J, Moreno S, Deeks SG, Muga R, Boswell SL, Ferrer E, Eron JJ, Napravnik S, Jose S, Phillips A, Justice AC, Tate JP, Gill J, Pacheco A, Veloso VG, Bucher HC, Egger M, Furrer H, Porter K, Touloumi G, Crane H, Miro JM, Sterne JA, Costagliola D, Saag M, Hernán MA, HIV-CAUSAL Collaboration., Centers for AIDS Research Network of Integrated Clinical Systems.: Comparison of dynamic monitoring strategies based on CD4 cell counts in virally suppressed, HIV-positive individuals on combination antiretroviral therapy in high-income countries: a prospective, observational study. Lancet HIV. 2017 Jun; 2017 Apr 11. PMID: 28411091

Hogg RS, Eyawo O, Collins AB, Zhang W, Jabbari S, Hull MW, Lima VD, Ahmed T, Kendall CE, Althoff KN, Justice AC, Barrios R, Shoveller J, Montaner JSG, Comparative Outcomes And Service Utilization Trends (COAST) study.: Health-adjusted life expectancy in HIV-positive and HIV-negative men and women in British Columbia, Canada: a population-based observational cohort study. Lancet HIV. 2017 Jun; 2017 Mar 3. PMID: 28262574

Zhao C, Pyle AM: Structural Insights into the Mechanism of Group II Intron Splicing. Trends Biochem Sci. 2017 Jun; 2017 Apr 21. PMID: 28438387

Meir C, Mincberg M, Rostovsky I, Tal S, Vollmers EM, Levi A, Tattersall P, Davis C: The MVMp P4 promoter is a host cell-type range determinant in vivo. Virology. 2017 Jun; 2017 Apr 6. PMID: 28391161

Zhang X, van den Pol AN: Rapid binge-like eating and body weight gain driven by zona incerta GABA neuron activation. Science. 2017 May 26. PMID: 28546212

Modjarrad K, Vermund SH: Ensuring HIV Data Availability, Transparency and Integrity in the MENA Region Comment on "Improving the Quality and Quantity of HIV Data in the Middle East and North Africa: Key Challenges and Ways Forward". Int J Health Policy Manag. 2017 May 22; 2017 May 22. PMID: 29172382

Gao B, Vorwerk H, Huber C, Lara-Tejero M, Mohr J, Goodman AL, Eisenreich W, Galán JE, Hofreuter D: Metabolic and fitness determinants for in vitro growth and intestinal colonization of the bacterial pathogen Campylobacter jejuni. PLoS Biol. 2017 May; 2017 May 19. PMID: 28542173

Hajek M, Sewell A, Kaech S, Burtness B, Yarbrough WG, Issaeva N: TRAF3/CYLD mutations identify a distinct subset of human papillomavirus-associated head and neck squamous cell carcinoma. Cancer. 2017 May 15; 2017 Mar 13. PMID: 28295222

Rosa-Mercado NA, Withers JB, Steitz JA: Settling the m6A debate: methylation of mature mRNA is not dynamic but accelerates turnover. Genes Dev. 2017 May 15. PMID: 28637691

Chase AR, Laudermilch E, Schlieker C: Torsin ATPases: Harnessing Dynamic Instability for Function. Front Mol Biosci. 2017; 2017 May 11. PMID: 28553638

Vilborg A, Steitz JA: Readthrough transcription: How are DoGs made and what do they do? RNA Biol. 2017 May 4; 2016 Feb 9. PMID: 26861889

Gordon KS, Edelman EJ, Justice AC, Fiellin DA, Akgün K, Crystal S, Duggal M, Goulet JL, Rimland D, Bryant KJ: Minority Men Who Have Sex with Men Demonstrate Increased Risk for HIV Transmission. AIDS Behav. 2017 May. PMID: 27771818

Justice AC, McGinnis KA, Tate JP, Xu K, Becker WC, Zhao H, Gelernter J, Kranzler HR: Validating Harmful Alcohol Use as a Phenotype for Genetic Discovery Using Phosphatidylethanol and a Polymorphism in ADH1B. Alcohol Clin Exp Res. 2017 May; 2017 Apr 10. PMID: 28295416

Helou E, Shenoi S, Kyriakides T, Landry ML, Kozal M, Barakat LA: Characterizing Patients with Very-Low-Level HIV Viremia: A Community-Based Study. J Int Assoc Provid AIDS Care. 2017 May/Jun; 2016 Nov 30. PMID: 27903948

Freiberg MS, Chang CH, Skanderson M, Patterson OV, DuVall SL, Brandt CA, So-Armah KA, Vasan RS, Oursler KA, Gottdiener J, Gottlieb S, Leaf D, Rodriguez-Barradas M, Tracy RP, Gibert CL, Rimland D, Bedimo RJ, Brown ST, Goetz MB, Warner A, Crothers K, Tindle HA, Alcorn C, Bachmann JM, Justice AC, Butt AA: Association Between HIV Infection and the Risk of Heart Failure With Reduced Ejection Fraction and Preserved Ejection Fraction in the Antiretroviral Therapy Era: Results From the Veterans Aging Cohort Study. JAMA Cardiol. 2017 May 1. PMID: 28384660

Panaccione A, Zhang Y, Ryan M, Moskaluk CA, Anderson KS, Yarbrough WG, Ivanov SV: MYB fusions and CD markers as tools for authentication and purification of cancer stem cells from salivary adenoid cystic carcinoma. Stem Cell Res. 2017 May; 2017 May 5. PMID: 28500913

Huan T, Forsberg EM, Rinehart D, Johnson CH, Ivanisevic J, Benton HP, Fang M, Aisporna A, Hilmers B, Poole FL, Thorgersen MP, Adams MWW, Krantz G, Fields MW, Robbins PD, Niedernhofer LJ, Ideker T, Majumder EL, Wall JD, Rattray NJW, Goodacre R, Lairson LL, Siuzdak G: Systems biology guided by XCMS Online metabolomics. Nat Methods. 2017 Apr 27. PMID: 28448069

Ma X, Dang H, Rose JA, Rablen P, Herzon SB: Hydroheteroarylation of Unactivated Alkenes Using N-Methoxyheteroarenium Salts. J Am Chem Soc. 2017 Apr 26; 2017 Apr 12. PMID: 28359149

Wexler AG, Goodman AL: An insider's perspective: Bacteroides as a window into the microbiome. Nat Microbiol. 2017 Apr 25; 2017 Apr 25. PMID: 28440278

Lim B, Zimmermann M, Barry NA, Goodman AL: Engineered Regulatory Systems Modulate Gene Expression of Human Commensals in the Gut. Cell. 2017 Apr 20. PMID: 28431252

Hastings AK, Yockey LJ, Jagger BW, Hwang J, Uraki R, Gaitsch HF, Parnell LA, Cao B, Mysorekar IU, Rothlin CV, Fikrig E, Diamond MS, Iwasaki A: TAM Receptors Are Not Required for Zika Virus Infection in Mice. Cell Rep. 2017 Apr 18. PMID: 28423319

Racicot K, Aldo P, El-Guindy A, Kwon JY, Romero R, Mor G: Cutting Edge: Fetal/Placental Type I IFN Can Affect Maternal Survival and Fetal Viral Load during Viral Infection. J Immunol. 2017 Apr 15; 2017 Mar 6. PMID: 28264970

Becker WC, Gordon K, Edelman EJ, Kerns RD, Crystal S, Dziura JD, Fiellin LE, Gordon AJ, Goulet JL, Justice AC, Fiellin DA: Erratum to: Trends in Any and High-Dose Opioid Analgesic Receipt Among Aging Patients With and Without HIV. AIDS Behav. 2017 Apr. PMID: 28188459

Chen Y, Wang Y, Huang Y, Zeng H, Hu B, Guan L, Zhang H, Yu AM, Johnson CH, Gonzalez FJ, Huang M, Bi H: PPARα regulates tumor cell proliferation and senescence via a novel target gene carnitine palmitoyltransferase 1C. Carcinogenesis. 2017 Apr 1. PMID: 28334197

Fujiwara RJ, Judson BL, Yarbrough WG, Husain Z, Mehra S: Treatment delays in oral cavity squamous cell carcinoma and association with survival. Head Neck. 2017 Apr; 2017 Feb 25. PMID: 28236349

Womack JA, Murphy TE, Bathulapalli H, Akgün KM, Gibert C, Kunisaki KM, Rimland D, Rodriguez-Barradas M, Yaggi HK, Justice AC, Redeker NS: Sleep Disturbance Among HIV-Infected and Uninfected Veterans. J Acquir Immune Defic Syndr. 2017 Apr 1. PMID: 27906767

Ullah I, Chung K, Beloor J, Kim J, Cho M, Kim N, Lee KY, Kumar P, Lee SK: Trileucine residues in a ligand-CPP-based siRNA delivery platform improve endosomal escape of siRNA. J Drug Target. 2017 Apr; 2016 Nov 22. PMID: 27820977

Kudalkar SN, Beloor J, Chan AH, Lee WG, Jorgensen WL, Kumar P, Anderson KS: Structural and Preclinical Studies of Computationally Designed Non-Nucleoside Reverse Transcriptase Inhibitors for Treating HIV infection. Mol Pharmacol. 2017 Apr; 2017 Feb 6. PMID: 28167742

Narasimhan M, Pedersen H, Ogilvie G, Vermund SH: The case for integrated human papillomavirus vaccine and HIV prevention with broader sexual and reproductive health and rights services for adolescent girls and young women. Trans R Soc Trop Med Hyg. 2017 Apr 1. PMID: 28673020

Hu B, Lara-Tejero M, Kong Q, Galán JE, Liu J: In Situ Molecular Architecture of the Salmonella Type III Secretion Machine. Cell. 2017 Mar 9. PMID: 28283062

Baquero E, Albertini AA, Raux H, Abou-Hamdan A, Boeri-Erba E, Ouldali M, Buonocore L, Rose JK, Lepault J, Bressanelli S, Gaudin Y: Structural intermediates in the fusion-associated transition of vesiculovirus glycoprotein. EMBO J. 2017 Mar 1; 2017 Feb 10. PMID: 28188244

Husain ZA, Chen T, Corso CD, Wang Z, Park H, Judson B, Yarbrough W, Deshpande H, Mehra S, Kuo P, Decker RH, Burtness BA: A Comparison of Prognostic Ability of Staging Systems for Human Papillomavirus-Related Oropharyngeal Squamous Cell Carcinoma. JAMA Oncol. 2017 Mar 1. PMID: 27737449

Cheraghlou S, Kuo P, Judson BL: Treatment delay and facility case volume are associated with survival in early-stage glottic cancer. Laryngoscope. 2017 Mar; 2016 Sep 22. PMID: 27653749

Liu F, Somarowthu S, Pyle AM: Visualizing the secondary and tertiary architectural domains of lncRNA RepA. Nat Chem Biol. 2017 Mar; 2017 Jan 9. PMID: 28068310

Panaccione A, Zhang Y, Mi Y, Mitani Y, Yan G, Prasad ML, McDonald WH, El-Naggar AK, Yarbrough WG, Ivanov SV: Chromosomal abnormalities and molecular landscape of metastasizing mucinous salivary adenocarcinoma. Oral Oncol. 2017 Mar; 2017 Jan 9. PMID: 28249646

Iwasaki A: Immune Regulation of Antibody Access to Neuronal Tissues. Trends Mol Med. 2017 Mar; 2017 Feb 7. PMID: 28185790

Goldberg EL, Asher JL, Molony RD, Shaw AC, Zeiss CJ, Wang C, Morozova-Roche LA, Herzog RI, Iwasaki A, Dixit VD: β-Hydroxybutyrate Deactivates Neutrophil NLRP3 Inflammasome to Relieve Gout Flares. Cell Rep. 2017 Feb 28. PMID: 28249154

van den Pol AN, Mao G, Chattopadhyay A, Rose JK, Davis JN: Chikungunya, Influenza, Nipah, and Semliki Forest Chimeric Viruses with Vesicular Stomatitis Virus: Actions in the Brain. J Virol. 2017 Mar 15; 2017 Feb 28. PMID: 28077641

van den Pol AN, Mao G, Yang Y, Ornaghi S, Davis JN: Zika Virus Targeting in the Developing Brain. J Neurosci. 2017 Feb 22; 2017 Jan 25. PMID: 28123079

Raymann K, Moeller AH, Goodman AL, Ochman H: Unexplored Archaeal Diversity in the Great Ape Gut Microbiome. mSphere. 2017 Jan-Feb; 2017 Feb 22. PMID: 28251182

Uraki R, Hwang J, Jurado KA, Householder S, Yockey LJ, Hastings AK, Homer RJ, Iwasaki A, Fikrig E: Zika virus causes testicular atrophy. Sci Adv. 2017 Feb; 2017 Feb 22. PMID: 28261663

Nelson KN, Hui Q, Rimland D, Xu K, Freiberg MS, Justice AC, Marconi VC, Sun YV: Identification of HIV infection-related DNA methylation sites and advanced epigenetic aging in HIV-positive, treatment-naive U.S. veterans. AIDS. 2017 Feb 20. PMID: 27922854

Fitzgerald ME, Rawling DC, Potapova O, Ren X, Kohlway A, Pyle AM: Selective RNA targeting and regulated signaling by RIG-I is controlled by coordination of RNA and ATP binding. Nucleic Acids Res. 2017 Feb 17. PMID: 28180316

Shiels MS, Althoff KN, Pfeiffer RM, Achenbach CJ, Abraham AG, Castilho J, Cescon A, D'Souza G, Dubrow R, Eron JJ, Gebo K, John Gill M, Goedert JJ, Grover S, Hessol NA, Justice A, Kitahata M, Mayor A, Moore RD, Napravnik S, Novak RM, Thorne JE, Silverberg MJ, Engels EA, North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) of the International Epidemiologic Databases to Evaluate AIDS (IeDEA).: HIV Infection, Immunosuppression, and Age at Diagnosis of Non-AIDS-Defining Cancers. Clin Infect Dis. 2017 Feb 15. PMID: 27940936

Hu Y, O'Boyle K, Auer J, Raju S, You F, Wang P, Fikrig E, Sutton RE: Multiple UBXN family members inhibit retrovirus and lentivirus production and canonical NFκΒ signaling by stabilizing IκBα. PLoS Pathog. 2017 Feb; 2017 Feb 2. PMID: 28152074

Ramsey C, Dziura J, Justice AC, Altalib HH, Bathulapalli H, Burg M, Decker S, Driscoll M, Goulet J, Haskell S, Kulas J, Wang KH, Mattocks K, Brandt C: Incidence of Mental Health Diagnoses in Veterans of Operations Iraqi Freedom, Enduring Freedom, and New Dawn, 2001-2014. Am J Public Health. 2017 Feb; 2016 Dec 20. PMID: 27997229

Fowler CC, Chang SJ, Gao X, Geiger T, Stack G, Galán JE: Emerging insights into the biology of typhoid toxin. Curr Opin Microbiol. 2017 Feb; 2017 Feb 16. PMID: 28213043

Riedel C, Vasishtan D, Siebert CA, Whittle C, Lehmann MJ, Mothes W, Grünewald K: Native structure of a retroviral envelope protein and its conformational change upon interaction with the target cell. J Struct Biol. 2017 Feb; 2016 Jun 23. PMID: 27345930

Gowda C, Newcomb CW, Liu Q, Carbonari DM, Lewis JD, Forde KA, Goldberg DS, Reddy KR, Roy JA, Marks AR, Schneider JL, Kostman JR, Tate JP, Lim JK, Justice AC, Goetz MB, Corley DA, Lo Re V: Risk of Acute Liver Injury With Antiretroviral Therapy by Viral Hepatitis Status. Open Forum Infect Dis. 2017 Spring; 2017 Jan 28. PMID: 28470014

Triplette M, Attia EF, Akgün KM, Soo Hoo GW, Freiberg MS, Butt AA, Wongtrakool C, Goetz MB, Brown ST, Graber CJ, Huang L, Crothers K: A Low Peripheral Blood CD4/CD8 Ratio Is Associated with Pulmonary Emphysema in HIV. PLoS One. 2017; 2017 Jan 25. PMID: 28122034

Wamsley JJ, Issaeva N, An H, Lu X, Donehower LA, Yarbrough WG: LZAP is a novel Wip1 binding partner and positive regulator of its phosphatase activity in vitro. Cell Cycle. 2017 Jan 17; 2016 Dec 27. PMID: 28027003

Han W, Tellez LA, Rangel MJ Jr, Motta SC, Zhang X, Perez IO, Canteras NS, Shammah-Lagnado SJ, van den Pol AN, de Araujo IE: Integrated Control of Predatory Hunting by the Central Nucleus of the Amygdala. Cell. 2017 Jan 12; 2017 Jan 12. PMID: 28086095

Alexandrov A, Shu MD, Steitz JA: Fluorescence Amplification Method for Forward Genetic Discovery of Factors in Human mRNA Degradation. Mol Cell. 2017 Jan 5; 2016 Dec 22. PMID: 28017590

Reiss CW, Xiong Y, Strobel SA: Structural Basis for Ligand Binding to the Guanidine-I Riboswitch. Structure. 2017 Jan 3; 2016 Dec 22. PMID: 28017522

Nichols J, Steinmetz A, Paintsil E: Impact of HIV-Status Disclosure on Adherence to Antiretroviral Therapy Among HIV-Infected Children in Resource-Limited Settings: A Systematic Review. AIDS Behav. 2017 Jan. PMID: 27395433

Edelman EJ, Maisto SA, Hansen NB, Cutter CJ, Dziura J, Fiellin LE, O'Connor PG, Bedimo R, Gibert C, Marconi VC, Rimland D, Rodriguez-Barradas MC, Simberkoff MS, Justice AC, Bryant KJ, Fiellin DA: The Starting Treatment for Ethanol in Primary care Trials (STEP Trials): Protocol for Three Parallel Multi-Site Stepped Care Effectiveness Studies for Unhealthy Alcohol Use in HIV-Positive Patients. Contemp Clin Trials. 2017 Jan; 2016 Nov 20. PMID: 27876616

Bournival N, Siegel MD, Akgün KM: Not "Out of Sight, Out of Mind": Interventions to Relieve Suffering for Bereaved Families After an ICU Death. Crit Care Med. 2017 Jan. PMID: 27984282

Triplette M, Attia E, Akgün K, Campo M, Rodriguez-Barradas M, Pipavath S, Shahrir S, Wongtrakool C, Goetz M, Kim J, Soo Hoo GW, Brown ST, Crothers K: The Differential Impact of Emphysema on Respiratory Symptoms and 6-Minute Walk Distance in HIV Infection. J Acquir Immune Defic Syndr. 2017 Jan 1. PMID: 27716727

Justice AC, Esserman D, Sarkar S, Levin FL, Skanderson M, Lim JK: Reply to: "Hepatitis C testing in U.S. veterans born 1945-1965: An update". J Hepatol. 2017 Jan; 2016 Oct 4. PMID: 27717863

Okuma K, Fukagawa K, Kohma T, Takahama Y, Hamaguchi Y, Ito M, Tanaka Y, Buonocore L, Rose JK, Hamaguchi I: A recombinant vesicular stomatitis virus encoding CCR5-tropic HIV-1 receptors targets HIV-1-infected cells and controls HIV-1 infection. Microbes Infect. 2017 Apr - May; 2016 Dec 24. PMID: 28025070

Iwasaki A, Foxman EF, Molony RD: Early local immune defences in the respiratory tract. Nat Rev Immunol. 2017 Jan; 2016 Nov 28. PMID: 27890913

Kuo P, Manes RP, Schwam ZG, Judson BL: Survival Outcomes for Combined Modality Therapy for Sinonasal Undifferentiated Carcinoma. Otolaryngol Head Neck Surg. 2017 Jan; 2016 Oct 5. PMID: 27703092

Lee NCJ, Kelly JR, Park HS, Yarbrough WG, Burtness BA, Husain ZA: The risk of level IB nodal involvement in oropharynx cancer: Guidance for submandibular gland sparing irradiation. Pract Radiat Oncol. 2017 Sep - Oct; 2017 Feb 16. PMID: 28356201

Nguyen HC, Wang W, Xiong Y: Cullin-RING E3 Ubiquitin Ligases: Bridges to Destruction. Subcell Biochem. 2017. PMID: 28271482

Laudermilch E, Tsai PL, Graham M, Turner E, Zhao C, Schlieker C: Dissecting Torsin/cofactor function at the nuclear envelope: a genetic study. Mol Biol Cell. 2016 Dec 15; 2016 Oct 26. PMID: 27798237

Dietsche T, Tesfazgi Mebrhatu M, Brunner MJ, Abrusci P, Yan J, Franz-Wachtel M, Schärfe C, Zilkenat S, Grin I, Galán JE, Kohlbacher O, Lea S, Macek B, Marlovits TC, Robinson CV, Wagner S: Structural and Functional Characterization of the Bacterial Type III Secretion Export Apparatus. PLoS Pathog. 2016 Dec; 2016 Dec 15. PMID: 27977800

Clarke DK, Hendry RM, Singh V, Rose JK, Seligman SJ, Klug B, Kochhar S, Mac LM, Carbery B, Chen RT, Brighton Collaboration Viral Vector Vaccines Safety Working Group.: Live virus vaccines based on a vesicular stomatitis virus (VSV) backbone: Standardized template with key considerations for a risk/benefit assessment. Vaccine. 2016 Dec 12; 2016 Jul 6. PMID: 27395563

Brown JA, Kinzig CG, DeGregorio SJ, Steitz JA: Methyltransferase-like protein 16 binds the 3'-terminal triple helix of MALAT1 long noncoding RNA. Proc Natl Acad Sci U S A. 2016 Dec 6; 2016 Nov 21. PMID: 27872311

Kuo P, Mehra S, Sosa JA, Roman SA, Husain ZA, Burtness BA, Tate JP, Yarbrough WG, Judson BL: Proposing prognostic thresholds for lymph node yield in clinically lymph node-negative and lymph node-positive cancers of the oral cavity. Cancer. 2016 Dec 1; 2016 Aug 1. PMID: 27479645

Salinas JL, Rentsch C, Marconi VC, Tate J, Budoff M, Butt AA, Freiberg MS, Gibert CL, Goetz MB, Leaf D, Rodriguez-Barradas MC, Justice AC, Rimland D: Baseline, Time-Updated, and Cumulative HIV Care Metrics for Predicting Acute Myocardial Infarction and All-Cause Mortality. Clin Infect Dis. 2016 Dec 1; 2016 Aug 18. PMID: 27539575

Cain LE, Saag MS, Petersen M, May MT, Ingle SM, Logan R, Robins JM, Abgrall S, Shepherd BE, Deeks SG, John Gill M, Touloumi G, Vourli G, Dabis F, Vandenhende MA, Reiss P, van Sighem A, Samji H, Hogg RS, Rybniker J, Sabin CA, Jose S, Del Amo J, Moreno S, Rodríguez B, Cozzi-Lepri A, Boswell SL, Stephan C, Pérez-Hoyos S, Jarrin I, Guest JL, D'Arminio Monforte A, Antinori A, Moore R, Campbell CN, Casabona J, Meyer L, Seng R, Phillips AN, Bucher HC, Egger M, Mugavero MJ, Haubrich R, Geng EH, Olson A, Eron JJ, Napravnik S, Kitahata MM, Van Rompaey SE, Teira R, Justice AC, Tate JP, Costagliola D, Sterne JA, Hernán MA, Antiretroviral Therapy Cohort Collaboration, the Centers for AIDS Research Network of Integrated Clinical Systems, and the HIV-CAUSAL Collaboration.: Using observational data to emulate a randomized trial of dynamic treatment-switching strategies: an application to antiretroviral therapy. Int J Epidemiol. 2016 Dec 1. PMID: 26721599

Howell BA, Long JB, Edelman EJ, McGinnis KA, Rimland D, Fiellin DA, Justice AC, Wang EA: Incarceration History and Uncontrolled Blood Pressure in a Multi-Site Cohort. J Gen Intern Med. 2016 Dec; 2016 Sep 12. PMID: 27619934

Ornaghi S, Davis JN, Gorres KL, Miller G, Paidas MJ, van den Pol AN: Mood stabilizers inhibit cytomegalovirus infection. Virology. 2016 Dec; 2016 Sep 19. PMID: 27657833

McKenzie J, Lopez-Giraldez F, Delecluse HJ, Walsh A, El-Guindy A: The Epstein-Barr Virus Immunoevasins BCRF1 and BPLF1 Are Expressed by a Mechanism Independent of the Canonical Late Pre-initiation Complex. PLoS Pathog. 2016 Nov; 2016 Nov 17. PMID: 27855219

Cheraghlou S, Kuo P, Judson BL: Radiotherapy for human papillomavirus-positive oropharyngeal cancers in the National Cancer Data Base. Cancer. 2016 Nov 15; 2016 Jul 15. PMID: 27420896

Chang SJ, Song J, Galán JE: Receptor-Mediated Sorting of Typhoid Toxin during Its Export from Salmonella Typhi-Infected Cells. Cell Host Microbe. 2016 Nov 9. PMID: 27832592

Shin H, Kumamoto Y, Gopinath S, Iwasaki A: CD301b+ dendritic cells stimulate tissue-resident memory CD8+ T cells to protect against genital HSV-2. Nat Commun. 2016 Nov 9; 2016 Nov 9. PMID: 27827367

Aldo P, You Y, Szigeti K, Horvath TL, Lindenbach B, Mor G: HSV-2 enhances ZIKV infection of the placenta and induces apoptosis in first-trimester trophoblast cells. Am J Reprod Immunol. 2016 Nov; 2016 Sep 10. PMID: 27613665

Johnson CH, Spilker ME, Goetz L, Peterson SN, Siuzdak G: Metabolite and Microbiome Interplay in Cancer Immunotherapy. Cancer Res. 2016 Nov 1; 2016 Oct 11. PMID: 27729325

Chen X, Yang K, Wu C, Chen C, Hu C, Buzovetsky O, Wang Z, Ji X, Xiong Y, Yang H: Mechanisms of activation and inhibition of Zika virus NS2B-NS3 protease. Cell Res. 2016 Nov; 2016 Oct 18. PMID: 27752039

Klein MB, Althoff KN, Jing Y, Lau B, Kitahata M, Lo Re V 3rd, Kirk GD, Hull M, Kim HN, Sebastiani G, Moodie EE, Silverberg MJ, Sterling TR, Thorne JE, Cescon A, Napravnik S, Eron J, Gill MJ, Justice A, Peters MG, Goedert JJ, Mayor A, Thio CL, Cachay ER, Moore R, North American AIDS Cohort Collaboration on Research and Design of IeDEA., North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) of IeDEA.: Risk of End-Stage Liver Disease in HIV-Viral Hepatitis Coinfected Persons in North America From the Early to Modern Antiretroviral Therapy Eras. Clin Infect Dis. 2016 Nov 1; 2016 Aug 9. PMID: 27506682

McGinnis KA, Tate JP, Williams EC, Skanderson M, Bryant KJ, Gordon AJ, Kraemer KL, Maisto SA, Crystal S, Fiellin DA, Justice AC: Comparison of AUDIT-C collected via electronic medical record and self-administered research survey in HIV infected and uninfected patients. Drug Alcohol Depend. 2016 Nov 1; 2016 Sep 22. PMID: 27694059

Blanco-Centurion C, Liu M, Konadhode RP, Zhang X, Pelluru D, van den Pol AN, Shiromani PJ: Optogenetic activation of melanin-concentrating hormone neurons increases non-rapid eye movement and rapid eye movement sleep during the night in rats. Eur J Neurosci. 2016 Nov; 2016 Oct 16. PMID: 27657541

Gaither JR, Goulet JL, Becker WC, Crystal S, Edelman EJ, Gordon K, Kerns RD, Rimland D, Skanderson M, Justice AC, Fiellin DA: The Effect of Substance Use Disorders on the Association Between Guideline-concordant Long-term Opioid Therapy and All-cause Mortality. J Addict Med. 2016 Nov/Dec. PMID: 27610580

Khambaty T, Stewart JC, Gupta SK, Chang CH, Bedimo RJ, Budoff MJ, Butt AA, Crane H, Gibert CL, Leaf DA, Rimland D, Tindle HA, So-Armah KA, Justice AC, Freiberg MS: Association Between Depressive Disorders and Incident Acute Myocardial Infarction in Human Immunodeficiency Virus-Infected Adults: Veterans Aging Cohort Study. JAMA Cardiol. 2016 Nov 1. PMID: 27557332

Barouch-Bentov R, Neveu G, Xiao F, Beer M, Bekerman E, Schor S, Campbell J, Boonyaratanakornkit J, Lindenbach B, Lu A, Jacob Y, Einav S: Hepatitis C Virus Proteins Interact with the Endosomal Sorting Complex Required for Transport (ESCRT) Machinery via Ubiquitination To Facilitate Viral Envelopment. MBio. 2016 Nov 1; 2016 Nov 1. PMID: 27803188

Zhang W, Xie M, Shu MD, Steitz JA, DiMaio D: A proximity-dependent assay for specific RNA-protein interactions in intact cells. RNA. 2016 Nov; 2016 Sep 22. PMID: 27659050

Bahal R, Ali McNeer N, Quijano E, Liu Y, Sulkowski P, Turchick A, Lu YC, Bhunia DC, Manna A, Greiner DL, Brehm MA, Cheng CJ, López-Giráldez F, Ricciardi A, Beloor J, Krause DS, Kumar P, Gallagher PG, Braddock DT, Mark Saltzman W, Ly DH, Glazer PM: In vivo correction of anaemia in β-thalassemic mice by γPNA-mediated gene editing with nanoparticle delivery. Nat Commun. 2016 Oct 26; 2016 Oct 26. PMID: 27782131

Herschhorn A, Ma X, Gu C, Ventura JD, Castillo-Menendez L, Melillo B, Terry DS, Smith AB 3rd, Blanchard SC, Munro JB, Mothes W, Finzi A, Sodroski J: Release of gp120 Restraints Leads to an Entry-Competent Intermediate State of the HIV-1 Envelope Glycoproteins. MBio. 2016 Oct 25; 2016 Oct 25. PMID: 27795397

Wang KH, Goulet JL, Carroll CM, Skanderson M, Fodeh S, Erdos J, Womack JA, Abel EA, Bathulapalli H, Justice AC, Nunez-Smith M, Brandt CA: Estimating healthcare mobility in the Veterans Affairs Healthcare System. BMC Health Serv Res. 2016 Oct 21; 2016 Oct 21. PMID: 27769221

Antonucci JM, St Gelais C, de Silva S, Yount JS, Tang C, Ji X, Shepard C, Xiong Y, Kim B, Wu L: SAMHD1-mediated HIV-1 restriction in cells does not involve ribonuclease activity. Nat Med. 2016 Oct 6. PMID: 27711056

Donald CL, Brennan B, Cumberworth SL, Rezelj VV, Clark JJ, Cordeiro MT, Freitas de Oliveira França R, Pena LJ, Wilkie GS, Da Silva Filipe A, Davis C, Hughes J, Varjak M, Selinger M, Zuvanov L, Owsianka AM, Patel AH, McLauchlan J, Lindenbach BD, Fall G, Sall AA, Biek R, Rehwinkel J, Schnettler E, Kohl A: Full Genome Sequence and sfRNA Interferon Antagonist Activity of Zika Virus from Recife, Brazil. PLoS Negl Trop Dis. 2016 Oct; 2016 Oct 5. PMID: 27706161

Zhang X, Justice AC, Hu Y, Wang Z, Zhao H, Wang G, Johnson EO, Emu B, Sutton RE, Krystal JH, Xu K: Epigenome-wide differential DNA methylation between HIV-infected and uninfected individuals. Epigenetics. 2016 Oct 2; 2016 Sep 27. PMID: 27672717

Taddei TH, Lo Re V 3rd, Justice AC: HIV, Aging, and Viral Coinfections: Taking the Long View. Curr HIV/AIDS Rep. 2016 Oct. PMID: 27614654

Langberg KM, Taddei TH: Balancing quality with quantity: The role of palliative care in managing decompensated cirrhosis. Hepatology. 2016 Oct; 2016 Aug 5. PMID: 27388118

Herrin M, Tate JP, Akgün KM, Butt AA, Crothers K, Freiberg MS, Gibert CL, Leaf DA, Rimland D, Rodriguez-Barradas MC, Ruser CB, Herold KC, Justice AC: Weight Gain and Incident Diabetes Among HIV-Infected Veterans Initiating Antiretroviral Therapy Compared With Uninfected Individuals. J Acquir Immune Defic Syndr. 2016 Oct 1. PMID: 27171741

Koethe JR, Jenkins CA, Lau B, Shepherd BE, Wester W, Rebeiro PF, Silverberg MJ, Thorne JE, Gill J, Mayor AM, Willig A, Bosch R, Horberg MA, Justice AC, Sterling TR, Moore RD, North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD).: Higher Time-Updated Body Mass Index: Association With Improved CD4+ Cell Recovery on HIV Treatment. J Acquir Immune Defic Syndr. 2016 Oct 1. PMID: 27116044

Zhang X, van den Pol AN: Hypothalamic arcuate nucleus tyrosine hydroxylase neurons play orexigenic role in energy homeostasis. Nat Neurosci. 2016 Oct; 2016 Aug 22. PMID: 27548245

Turner EM, Schlieker C: Pelger-Huët anomaly and Greenberg skeletal dysplasia: LBR-associated diseases of cholesterol metabolism. Rare Dis. 2016; 2016 Sep 27. PMID: 27830109

Kumamoto Y, Hirai T, Wong PW, Kaplan DH, Iwasaki A: CD301b+ dendritic cells suppress T follicular helper cells and antibody responses to protein antigens. Elife. 2016 Sep 22; 2016 Sep 22. PMID: 27657168

Kumamoto Y, Camporez JPG, Jurczak MJ, Shanabrough M, Horvath T, Shulman GI, Iwasaki A: CD301b(+) Mononuclear Phagocytes Maintain Positive Energy Balance through Secretion of Resistin-like Molecule Alpha. Immunity. 2016 Sep 20; 2016 Aug 23. PMID: 27566941

Ramaswamy AT, Toll B, Chagpar AB, Judson BL: Reply to smoking cessation for patients with cancer: "The Emperor's New Clothes". Cancer. 2016 Sep 15; 2016 Jun 10. PMID: 27285587

Akgün KM, Tate JP, Oursler KK, Crystal S, Leaf DA, Womack JA, Brown TT, Justice AC, Crothers K: Association of chronic obstructive pulmonary disease with frailty measurements in HIV-infected and uninfected Veterans. AIDS. 2016 Sep 10. PMID: 27191979

Onorati M, Li Z, Liu F, Sousa AMM, Nakagawa N, Li M, Dell'Anno MT, Gulden FO, Pochareddy S, Tebbenkamp ATN, Han W, Pletikos M, Gao T, Zhu Y, Bichsel C, Varela L, Szigeti-Buck K, Lisgo S, Zhang Y, Testen A, Gao XB, Mlakar J, Popovic M, Flamand M, Strittmatter SM, Kaczmarek LK, Anton ES, Horvath TL, Lindenbach BD, Sestan N: Zika Virus Disrupts Phospho-TBK1 Localization and Mitosis in Human Neuroepithelial Stem Cells and Radial Glia. Cell Rep. 2016 Sep 6; 2016 Aug 24. PMID: 27568284

Ooka K, Onyiuke I, Zhang X, Taddei TH: Protective altruistic phlebotomy: hereditary haemochromatosis presenting as hepatocellular carcinoma in a non-cirrhotic 83-year-old man. BMJ Case Rep. 2016 Sep 2; 2016 Sep 2. PMID: 27591041

Lauretti F, Chattopadhyay A, de Oliveira França RF, Castro-Jorge L, Rose J, Fonseca BA: Recombinant vesicular stomatitis virus-based dengue-2 vaccine candidate induces humoral response and protects mice against lethal infection. Hum Vaccin Immunother. 2016 Sep; 2016 May 16. PMID: 27185081

Shook B, Xiao E, Kumamoto Y, Iwasaki A, Horsley V: CD301b+ Macrophages Are Essential for Effective Skin Wound Healing. J Invest Dermatol. 2016 Sep; 2016 Jun 7. PMID: 27287183

Tetrault JM, Tate JP, Edelman EJ, Gordon AJ, Lo Re V 3rd, Lim JK, Rimland D, Goulet J, Crystal S, Gaither JR, Gibert CL, Rodriguez-Barradas MC, Fiellin LE, Bryant K, Justice AC, Fiellin DA: Hepatic Safety of Buprenorphine in HIV-Infected and Uninfected Patients With Opioid Use Disorder: The Role of HCV-Infection. J Subst Abuse Treat. 2016 Sep; 2016 Jun 6. PMID: 27431048

Yockey LJ, Varela L, Rakib T, Khoury-Hanold W, Fink SL, Stutz B, Szigeti-Buck K, Van den Pol A, Lindenbach BD, Horvath TL, Iwasaki A: Vaginal Exposure to Zika Virus during Pregnancy Leads to Fetal Brain Infection. Cell. 2016 Aug 25. PMID: 27565347

Li M, Mislak AC, Foli Y, Agbosu E, Bose V, Bhandari S, Szymanski MR, Shumate CK, Yin YW, Anderson KS, Paintsil E: The DNA Polymerase Gamma R953C Mutant Is Associated with Antiretroviral Therapy-Induced Mitochondrial Toxicity. Antimicrob Agents Chemother. 2016 Sep; 2016 Aug 22. PMID: 27381400

Jurado KA, Simoni MK, Tang Z, Uraki R, Hwang J, Householder S, Wu M, Lindenbach BD, Abrahams VM, Guller S, Fikrig E: Zika virus productively infects primary human placenta-specific macrophages. JCI Insight. 2016 Aug 18. PMID: 27595140

Yin MT, Shiau S, Rimland D, Gibert CL, Bedimo RJ, Rodriguez-Barradas MC, Harwood K, Aschheim J, Justice AC, Womack JA: Fracture Prediction With Modified-FRAX in Older HIV-Infected and Uninfected Men. J Acquir Immune Defic Syndr. 2016 Aug 15. PMID: 27003493

Trickey A, May MT, Vehreschild J, Obel N, Gill MJ, Crane H, Boesecke C, Samji H, Grabar S, Cazanave C, Cavassini M, Shepherd L, d'Arminio Monforte A, Smit C, Saag M, Lampe F, Hernando V, Montero M, Zangerle R, Justice AC, Sterling T, Miro J, Ingle S, Sterne JA, Antiretroviral Therapy Cohort Collaboration (ART-CC).: Cause-Specific Mortality in HIV-Positive Patients Who Survived Ten Years after Starting Antiretroviral Therapy. PLoS One. 2016; 2016 Aug 15. PMID: 27525413

Nakaya Y, Stavrou S, Blouch K, Tattersall P, Ross SR: In Vivo Examination of Mouse APOBEC3- and Human APOBEC3A- and APOBEC3G-Mediated Restriction of Parvovirus and Herpesvirus Infection in Mouse Models. J Virol. 2016 Sep 1; 2016 Aug 12. PMID: 27356895

Yarbrough WG, Panaccione A, Chang MT, Ivanov SV: Clinical and molecular insights into adenoid cystic carcinoma: Neural crest-like stemness as a target. Laryngoscope Investig Otolaryngol. 2016 Aug; 2016 Aug 4. PMID: 28894804

Sewald X, Motamedi N, Mothes W: Viruses exploit the tissue physiology of the host to spread in vivo. Curr Opin Cell Biol. 2016 Aug; 2016 May 3. PMID: 27149407

Sarkar S, Esserman DA, Skanderson M, Levin FL, Justice AC, Lim JK: Disparities in hepatitis C testing in U.S. veterans born 1945-1965. J Hepatol. 2016 Aug; 2016 Apr 27. PMID: 27130843

Pawlica P, Moss WN, Steitz JA: Host miRNA degradation by Herpesvirus saimiri small nuclear RNA requires an unstructured interacting region. RNA. 2016 Aug; 2016 Jun 22. PMID: 27335146

Foxman EF, Storer JA, Vanaja K, Levchenko A, Iwasaki A: Two interferon-independent double-stranded RNA-induced host defense strategies suppress the common cold virus at warm temperature. Proc Natl Acad Sci U S A. 2016 Jul 26; 2016 Jul 11. PMID: 27402752

Rice TA, Palm NW: Tummy Time: The Infant Microbiota-IgA Connection. Cell Host Microbe. 2016 Jul 13. PMID: 27414495

Pyle AM: Group II Intron Self-Splicing. Annu Rev Biophys. 2016 Jul 5. PMID: 27391926

Subramanian HE, Park HS, Barbieri A, Mahajan A, Judson BL, Mehra S, Yarbrough WG, Burtness BA, Husain ZA: Pretreatment predictors of adjuvant chemoradiation in patients receiving transoral robotic surgery for squamous cell carcinoma of the oropharynx: a case control study. Cancers Head Neck. 2016; 2016 Jul 4. PMID: 31093337

Johnson CH, Ivanisevic J, Siuzdak G: Metabolomics: beyond biomarkers and towards mechanisms. Nat Rev Mol Cell Biol. 2016 Jul; 2016 Mar 16. PMID: 26979502

Schmid ET, Pang IK, Carrera Silva EA, Bosurgi L, Miner JJ, Diamond MS, Iwasaki A, Rothlin CV: AXL receptor tyrosine kinase is required for T cell priming and antiviral immunity. Elife. 2016 Jun 28; 2016 Jun 28. PMID: 27350258

Costa FR, Françozo MC, de Oliveira GG, Ignacio A, Castoldi A, Zamboni DS, Ramos SG, Câmara NO, de Zoete MR, Palm NW, Flavell RA, Silva JS, Carlos D: Gut microbiota translocation to the pancreatic lymph nodes triggers NOD2 activation and contributes to T1D onset. J Exp Med. 2016 Jun 27; 2016 Jun 20. PMID: 27325889

Tsai PL, Zhao C, Turner E, Schlieker C: The Lamin B receptor is essential for cholesterol synthesis and perturbed by disease-causing mutations. Elife. 2016 Jun 23; 2016 Jun 23. PMID: 27336722

Gary C, Hajek M, Biktasova A, Bellinger G, Yarbrough WG, Issaeva N: Selective antitumor activity of roscovitine in head and neck cancer. Oncotarget. 2016 Jun 21. PMID: 27233076

Kuo P, Sosa JA, Burtness BA, Husain ZA, Mehra S, Roman SA, Yarbrough WG, Judson BL: Treatment trends and survival effects of chemotherapy for hypopharyngeal cancer: Analysis of the National Cancer Data Base. Cancer. 2016 Jun 15; 2016 Mar 28. PMID: 27019213

May MT, Vehreschild JJ, Trickey A, Obel N, Reiss P, Bonnet F, Mary-Krause M, Samji H, Cavassini M, Gill MJ, Shepherd LC, Crane HM, d'Arminio Monforte A, Burkholder GA, Johnson MM, Sobrino-Vegas P, Domingo P, Zangerle R, Justice AC, Sterling TR, Miró JM, Sterne JAC, Antiretroviral Therapy Cohort Collaboration (ART-CC)., Boulle A, Stephan C, Miro JM, Cavassini M, Chêne G, Costagliola D, Dabis F, Monforte AD, Del Amo J, Van Sighem A, Fätkenheuer G, Gill J, Guest J, Haerry DH, Hogg R, Justice A, Shepherd L, Obel N, Crane H, Smith C, Reiss P, Saag M, Sterling T, Teira R, Williams M, Zangerle R, Sterne J, May M, Ingle S, Trickey A: Mortality According to CD4 Count at Start of Combination Antiretroviral Therapy Among HIV-infected Patients Followed for up to 15 Years After Start of Treatment: Collaborative Cohort Study. Clin Infect Dis. 2016 Jun 15; 2016 Mar 29. PMID: 27025828

Perry RJ, Peng L, Barry NA, Cline GW, Zhang D, Cardone RL, Petersen KF, Kibbey RG, Goodman AL, Shulman GI: Acetate mediates a microbiome-brain-β-cell axis to promote metabolic syndrome. Nature. 2016 Jun 9. PMID: 27279214

Khoury-Hanold W, Yordy B, Kong P, Kong Y, Ge W, Szigeti-Buck K, Ralevski A, Horvath TL, Iwasaki A: Viral Spread to Enteric Neurons Links Genital HSV-1 Infection to Toxic Megacolon and Lethality. Cell Host Microbe. 2016 Jun 8. PMID: 27281569

Liang F, Longerich S, Miller AS, Tang C, Buzovetsky O, Xiong Y, Maranon DG, Wiese C, Kupfer GM, Sung P: Promotion of RAD51-Mediated Homologous DNA Pairing by the RAD51AP1-UAF1 Complex. Cell Rep. 2016 Jun 7; 2016 May 26. PMID: 27239033

Galán JE: Typhoid toxin provides a window into typhoid fever and the biology of Salmonella Typhi. Proc Natl Acad Sci U S A. 2016 Jun 7; 2016 May 24. PMID: 27222578

Yu T, Wang Y, Zhang H, Johnson CH, Jiang Y, Li X, Wu Z, Liu T, Krausz KW, Yu A, Gonzalez FJ, Huang M, Bi H: Metabolomics reveals mycoplasma contamination interferes with the metabolism of PANC-1 cells. Anal Bioanal Chem. 2016 Jun; 2016 Apr 13. PMID: 27074779

Laudermilch E, Schlieker C: Torsin ATPases: structural insights and functional perspectives. Curr Opin Cell Biol. 2016 Jun; 2016 Jan 21. PMID: 26803745

Patel N, Aldahmesh MA, Alkuraya H, Anazi S, Alsharif H, Khan AO, Sunker A, Al-Mohsen S, Abboud EB, Nowilaty SR, Alowain M, Al-Zaidan H, Al-Saud B, Alasmari A, Abdel-Salam GM, Abouelhoda M, Abdulwahab FM, Ibrahim N, Naim E, Al-Younes B, E AlMostafa A, AlIssa A, Hashem M, Buzovetsky O, Xiong Y, Monies D, Altassan N, Shaheen R, Al-Hazzaa SA, Alkuraya FS: Expanding the clinical, allelic, and locus heterogeneity of retinal dystrophies. Genet Med. 2016 Jun; 2015 Sep 10. PMID: 26355662

So-Armah KA, Tate JP, Chang CH, Butt AA, Gerschenson M, Gibert CL, Leaf D, Rimland D, Rodriguez-Barradas MC, Budoff MJ, Samet JH, Kuller LH, Deeks SG, Crothers K, Tracy RP, Crane HM, Sajadi MM, Tindle HA, Justice AC, Freiberg MS, VACS Project Team.: Do Biomarkers of Inflammation, Monocyte Activation, and Altered Coagulation Explain Excess Mortality Between HIV Infected and Uninfected People? J Acquir Immune Defic Syndr. 2016 Jun 1. PMID: 27824677

Iwasaki A: Antiviral responses of inbred mice. Nat Rev Immunol. 2016 Jun; 2016 Apr 25. PMID: 27108522

Zhao C, Pyle AM: Crystal structures of a group II intron maturase reveal a missing link in spliceosome evolution. Nat Struct Mol Biol. 2016 Jun; 2016 May 2. PMID: 27136328

Iijima N, Iwasaki A: Access of protective antiviral antibody to neuronal tissues requires CD4 T-cell help. Nature. 2016 May 26; 2016 May 18. PMID: 27225131

Iwasaki A: Exploiting Mucosal Immunity for Antiviral Vaccines. Annu Rev Immunol. 2016 May 20. PMID: 27168245

Kong R, Xu K, Zhou T, Acharya P, Lemmin T, Liu K, Ozorowski G, Soto C, Taft JD, Bailer RT, Cale EM, Chen L, Choi CW, Chuang GY, Doria-Rose NA, Druz A, Georgiev IS, Gorman J, Huang J, Joyce MG, Louder MK, Ma X, McKee K, O'Dell S, Pancera M, Yang Y, Blanchard SC, Mothes W, Burton DR, Koff WC, Connors M, Ward AB, Kwong PD, Mascola JR: Fusion peptide of HIV-1 as a site of vulnerability to neutralizing antibody. Science. 2016 May 13. PMID: 27174988

Tycowski KT, Shu MD, Steitz JA: Myriad Triple-Helix-Forming Structures in the Transposable Element RNAs of Plants and Fungi. Cell Rep. 2016 May 10; 2016 Apr 28. PMID: 27134163

Lindenbach BD: What's next for hepatitis C virus research? Hepatology. 2016 May; 2016 Mar 19. PMID: 26853717

Gaither JR, Goulet JL, Becker WC, Crystal S, Edelman EJ, Gordon K, Kerns RD, Rimland D, Skanderson M, Justice AC, Fiellin DA: The Association Between Receipt of Guideline-Concordant Long-Term Opioid Therapy and All-Cause Mortality. J Gen Intern Med. 2016 May. PMID: 26847447

Zilkenat S, Franz-Wachtel M, Stierhof YD, Galán JE, Macek B, Wagner S: Determination of the Stoichiometry of the Complete Bacterial Type III Secretion Needle Complex Using a Combined Quantitative Proteomic Approach. Mol Cell Proteomics. 2016 May; 2016 Feb 21. PMID: 26900162

Brown JA, Kinzig CG, DeGregorio SJ, Steitz JA: Hoogsteen-position pyrimidines promote the stability and function of the MALAT1 RNA triple helix. RNA. 2016 May; 2016 Mar 7. PMID: 26952103

Zhao C, Brown RS, Tang CH, Hu CC, Schlieker C: Site-specific Proteolysis Mobilizes TorsinA from the Membrane of the Endoplasmic Reticulum (ER) in Response to ER Stress and B Cell Stimulation. J Biol Chem. 2016 Apr 29; 2016 Mar 7. PMID: 26953341

Pillai PS, Molony RD, Martinod K, Dong H, Pang IK, Tal MC, Solis AG, Bielecki P, Mohanty S, Trentalange M, Homer RJ, Flavell RA, Wagner DD, Montgomery RR, Shaw AC, Staeheli P, Iwasaki A: Mx1 reveals innate pathways to antiviral resistance and lethal influenza disease. Science. 2016 Apr 22. PMID: 27102485

Freiberg MS, Bebu I, Tracy R, So-Armah K, Okulicz J, Ganesan A, Armstrong A, O'Bryan T, Rimland D, Justice AC, Agan BK, Infectious Disease Clinical Research Program HIV Working Group.: D-Dimer Levels before HIV Seroconversion Remain Elevated Even after Viral Suppression and Are Associated with an Increased Risk of Non-AIDS Events. PLoS One. 2016; 2016 Apr 18. PMID: 27088215

Ramaswamy AT, Toll BA, Chagpar AB, Judson BL: Smoking, cessation, and cessation counseling in patients with cancer: A population-based analysis. Cancer. 2016 Apr 15; 2016 Feb 16. PMID: 26881851

Panaccione A, Chang MT, Carbone BE, Guo Y, Moskaluk CA, Virk RK, Chiriboga L, Prasad ML, Judson B, Mehra S, Yarbrough WG, Ivanov SV: NOTCH1 and SOX10 are Essential for Proliferation and Radiation Resistance of Cancer Stem-Like Cells in Adenoid Cystic Carcinoma. Clin Cancer Res. 2016 Apr 15. PMID: 27084744

Kamanova J, Sun H, Lara-Tejero M, Galán JE: The Salmonella Effector Protein SopA Modulates Innate Immune Responses by Targeting TRIM E3 Ligase Family Members. PLoS Pathog. 2016 Apr; 2016 Apr 8. PMID: 27058235

Pirakitikulr N, Kohlway A, Lindenbach BD, Pyle AM: The Coding Region of the HCV Genome Contains a Network of Regulatory RNA Structures. Mol Cell. 2016 Apr 7; 2016 Feb 25. PMID: 26924328

Racicot K, Kwon JY, Aldo P, Abrahams V, El-Guindy A, Romero R, Mor G: Type I Interferon Regulates the Placental Inflammatory Response to Bacteria and is Targeted by Virus: Mechanism of Polymicrobial Infection-Induced Preterm Birth. Am J Reprod Immunol. 2016 Apr; 2016 Feb 19. PMID: 26892235

Justice AC, McGinnis KA, Tate JP, Braithwaite RS, Bryant KJ, Cook RL, Edelman EJ, Fiellin LE, Freiberg MS, Gordon AJ, Kraemer KL, Marshall BD, Williams EC, Fiellin DA: Risk of mortality and physiologic injury evident with lower alcohol exposure among HIV infected compared with uninfected men. Drug Alcohol Depend. 2016 Apr 1; 2016 Jan 29. PMID: 26861883

Sasaki CT, Issaeva N, Vageli DP: In vitro model for gastroduodenal reflux-induced nuclear factor-kappaB activation and its role in hypopharyngeal carcinogenesis. Head Neck. 2016 Apr; 2015 Nov 11. PMID: 26559497

Luryi AL, Chen MM, Mehra S, Roman SA, Sosa JA, Judson BL: Hospital readmission and 30-day mortality after surgery for oral cavity cancer: Analysis of 21,681 cases. Head Neck. 2016 Apr; 2015 Sep 9. PMID: 25537226

Taddei TH: Learning from the Melbourne experience: How reliable are cancer registry data for hepatocellular carcinoma? Hepatology. 2016 Apr; 2016 Mar 1. PMID: 26764271

Paintsil E, Martin R, Goldenthal A, Bhandari S, Andiman W, Ghebremichael M: Frequent Episodes of Detectable Viremia in HIV Treatment-Experienced Children is Associated with a Decline in CD4+ T-cells Over Time. J AIDS Clin Res. 2016 Apr; 2016 Apr 14. PMID: 27379199

Shahrir S, Tindle HA, McGinnis KA, Fiellin DA, Goulet J, Akgün KM, Gibert CL, Rodriguez-Barradas MC, Crothers K: Contemplation of smoking cessation and quit attempts in human immunodeficiency virus-infected and uninfected veterans. Subst Abus. 2016 Apr-Jun; 2015 Jul 13. PMID: 26167725

Wexler AG, Bao Y, Whitney JC, Bobay LM, Xavier JB, Schofield WB, Barry NA, Russell AB, Tran BQ, Goo YA, Goodlett DR, Ochman H, Mougous JD, Goodman AL: Human symbionts inject and neutralize antibacterial toxins to persist in the gut. Proc Natl Acad Sci U S A. 2016 Mar 29; 2016 Mar 8. PMID: 26957597

Luo Y, Motamedi N, Magaldi TG, Gee GV, Atwood WJ, DiMaio D: Interaction between Simian Virus 40 Major Capsid Protein VP1 and Cell Surface Ganglioside GM1 Triggers Vacuole Formation. MBio. 2016 Mar 22; 2016 Mar 22. PMID: 27006465

Lee N, Yario TA, Gao JS, Steitz JA: EBV noncoding RNA EBER2 interacts with host RNA-binding proteins to regulate viral gene expression. Proc Natl Acad Sci U S A. 2016 Mar 22; 2016 Mar 7. PMID: 26951683

Sun H, Kamanova J, Lara-Tejero M, Galán JE: A Family of Salmonella Type III Secretion Effector Proteins Selectively Targets the NF-κB Signaling Pathway to Preserve Host Homeostasis. PLoS Pathog. 2016 Mar; 2016 Mar 2. PMID: 26933955

McGinnis KA, Fiellin DA, Tate JP, Cook RL, Braithwaite RS, Bryant KJ, Edelman EJ, Gordon AJ, Kraemer KL, Maisto SA, Justice AC, Veterans Aging Cohort Study.: Number of Drinks to "Feel a Buzz" by HIV Status and Viral Load in Men. AIDS Behav. 2016 Mar. PMID: 26936030

Becker WC, Gordon K, Edelman EJ, Kerns RD, Crystal S, Dziura JD, Fiellin LE, Gordon AJ, Goulet JL, Justice AC, Fiellin DA: Trends in Any and High-Dose Opioid Analgesic Receipt Among Aging Patients With and Without HIV. AIDS Behav. 2016 Mar. PMID: 26384973

Braithwaite RS, Fang Y, Tate J, Mentor SM, Bryant KJ, Fiellin DA, Justice AC: Do Alcohol Misuse, Smoking, and Depression Vary Concordantly or Sequentially? A Longitudinal Study of HIV-Infected and Matched Uninfected Veterans in Care. AIDS Behav. 2016 Mar. PMID: 26187007

Rentsch C, Tate JP, Akgün KM, Crystal S, Wang KH, Ryan Greysen S, Wang EA, Bryant KJ, Fiellin DA, Justice AC, Rimland D: Erratum to: Alcohol-Related Diagnoses and All-Cause Hospitalization Among HIV-Infected and Uninfected Patients: A Longitudinal Analysis of United States Veterans from 1997 to 2011. AIDS Behav. 2016 Mar. PMID: 25972072

Rentsch C, Tate JP, Akgün KM, Crystal S, Wang KH, Ryan Greysen S, Wang EA, Bryant KJ, Fiellin DA, Justice AC, Rimland D: Alcohol-Related Diagnoses and All-Cause Hospitalization Among HIV-Infected and Uninfected Patients: A Longitudinal Analysis of United States Veterans from 1997 to 2011. AIDS Behav. 2016 Mar. PMID: 25711299

Chang MT, Schwam ZG, Hajek MA, Paskhover B, Judson BL: Severe epistaxis due to aberrant vasculature in a patient with STAT-1 mutation. Head Neck. 2016 Mar; 2015 Oct 7. PMID: 26445901

Tellez LA, Han W, Zhang X, Ferreira TL, Perez IO, Shammah-Lagnado SJ, van den Pol AN, de Araujo IE: Separate circuitries encode the hedonic and nutritional values of sugar. Nat Neurosci. 2016 Mar; 2016 Jan 25. PMID: 26807950

Pyle AM, Schlick T: Challenges in RNA Structural Modeling and Design. J Mol Biol. 2016 Feb 27; 2016 Feb 12. PMID: 26876599

Song J, Wilhelm CL, Wangdi T, Maira-Litran T, Lee SJ, Raetz M, Sturge CR, Mirpuri J, Pei J, Grishin NV, McSorley SJ, Gewirtz AT, Bäumler AJ, Pier GB, Galán JE, Yarovinsky F: Absence of TLR11 in Mice Does Not Confer Susceptibility to Salmonella Typhi. Cell. 2016 Feb 25. PMID: 26919416

Tsou LK, Lara-Tejero M, RoseFigura J, Zhang ZJ, Wang YC, Yount JS, Lefebre M, Dossa PD, Kato J, Guan F, Lam W, Cheng YC, Galán JE, Hang HC: Antibacterial Flavonoids from Medicinal Plants Covalently Inactivate Type III Protein Secretion Substrates. J Am Chem Soc. 2016 Feb 24; 2016 Feb 16. PMID: 26847396

Chen X, Zou X, He J, Zheng J, Chiarella J, Kozal MJ: HIV Drug Resistance Mutations (DRMs) Detected by Deep Sequencing in Virologic Failure Subjects on Therapy from Hunan Province, China. PLoS One. 2016; 2016 Feb 19. PMID: 26895182

Ikediobi U, Sutton RE: Aspergillus fumigatus native valve infective endocarditis in an otherwise healthy adult. JMM Case Rep. 2016 Feb; 2016 Feb 18. PMID: 28348749

Spanò S, Gao X, Hannemann S, Lara-Tejero M, Galán JE: A Bacterial Pathogen Targets a Host Rab-Family GTPase Defense Pathway with a GAP. Cell Host Microbe. 2016 Feb 10. PMID: 26867180

Kukoyi O, Renner L, Powell J, Barry O, Prin M, Kusah J, Cong X, Paintsil E: Viral load monitoring and antiretroviral treatment outcomes in a pediatric HIV cohort in Ghana. BMC Infect Dis. 2016 Feb 3; 2016 Feb 3. PMID: 26843068

Akkina R, Allam A, Balazs AB, Blankson JN, Burnett JC, Casares S, Garcia JV, Hasenkrug KJ, Kashanchi F, Kitchen SG, Klein F, Kumar P, Luster AD, Poluektova LY, Rao M, Sanders-Beer BE, Shultz LD, Zack JA: Improvements and Limitations of Humanized Mouse Models for HIV Research: NIH/NIAID "Meet the Experts" 2015 Workshop Summary. AIDS Res Hum Retroviruses. 2016 Feb. PMID: 26670361

Lilley DM, Pyle AM: Editorial overview: Nucleic acids and their protein complexes. Curr Opin Struct Biol. 2016 Feb; 2016 Mar 2. PMID: 26948825

Gopinath S, Kumamoto Y, Iwasaki A: O-linked sugars sound the alarm. Nat Immunol. 2016 Feb. PMID: 26784258

Hansen C, Paintsil E: Infectious Diseases of Poverty in Children: A Tale of Two Worlds. Pediatr Clin North Am. 2016 Feb. PMID: 26613688

Herbert KM, Sarkar SK, Mills M, Delgado De la Herran HC, Neuman KC, Steitz JA: A heterotrimer model of the complete Microprocessor complex revealed by single-molecule subunit counting. RNA. 2016 Feb; 2015 Dec 18. PMID: 26683315

Kim J, Chung K, Choi C, Beloor J, Ullah I, Kim N, Lee KY, Lee SK, Kumar P: Silencing CCR2 in Macrophages Alleviates Adipose Tissue Inflammation and the Associated Metabolic Syndrome in Dietary Obese Mice. Mol Ther Nucleic Acids. 2016 Jan 26; 2016 Jan 26. PMID: 26812653

Mahiti M, Toyoda M, Jia X, Kuang XT, Mwimanzi F, Mwimanzi P, Walker BD, Xiong Y, Brumme ZL, Brockman MA, Ueno T: Relative Resistance of HLA-B to Downregulation by Naturally Occurring HIV-1 Nef Sequences. MBio. 2016 Jan 19; 2016 Jan 19. PMID: 26787826

Korthuis PT, McGinnis KA, Kraemer KL, Gordon AJ, Skanderson M, Justice AC, Crystal S, Goetz MB, Gibert CL, Rimland D, Fiellin LE, Gaither JR, Wang K, Asch SM, McInnes DK, Ohl ME, Bryant K, Tate JP, Duggal M, Fiellin DA: Quality of HIV Care and Mortality Rates in HIV-Infected Patients. Clin Infect Dis. 2016 Jan 15; 2015 Sep 3. PMID: 26338783

Black AC, Cooney NL, Justice AC, Fiellin LE, Pietrzak RH, Lazar CM, Rosen MI: Momentary assessment of PTSD symptoms and sexual risk behavior in male OEF/OIF/OND Veterans. J Affect Disord. 2016 Jan 15; 2015 Oct 31. PMID: 26551400

DiMaio D: Thank You, Edward. Merci, Louis. PLoS Pathog. 2016 Jan; 2016 Jan 14. PMID: 26766042

Khoury-Hanold W, Iwasaki A: Autophagy Snuffs a Macrophage's Inner Fire. Cell Host Microbe. 2016 Jan 13. PMID: 26764592

Han W, Tellez LA, Niu J, Medina S, Ferreira TL, Zhang X, Su J, Tong J, Schwartz GJ, van den Pol A, de Araujo IE: Striatal Dopamine Links Gastrointestinal Rerouting to Altered Sweet Appetite. Cell Metab. 2016 Jan 12; 2015 Nov 19. PMID: 26698915

Al-Yacoub N, Shaheen R, Awad SM, Kunhi M, Dzimiri N, Nguyen HC, Xiong Y, Al-Buraiki J, Al-Habeeb W, Alkuraya FS, Poizat C: FBXO32, encoding a member of the SCF complex, is mutated in dilated cardiomyopathy. Genome Biol. 2016 Jan 11; 2016 Jan 11. PMID: 26753747

Koethe JR, Jenkins CA, Lau B, Shepherd BE, Justice AC, Tate JP, Buchacz K, Napravnik S, Mayor AM, Horberg MA, Blashill AJ, Willig A, Wester CW, Silverberg MJ, Gill J, Thorne JE, Klein M, Eron JJ, Kitahata MM, Sterling TR, Moore RD, North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD).: Rising Obesity Prevalence and Weight Gain Among Adults Starting Antiretroviral Therapy in the United States and Canada. AIDS Res Hum Retroviruses. 2016 Jan; 2015 Sep 9. PMID: 26352511

Sam-Agudu NA, Paintsil E, Aliyu MH, Kwara A, Ogunsola F, Afrane YA, Onoka C, Awandare GA, Amponsah G, Cornelius LJ, Mendy G, Sturke R, Ghansah A, Siberry GK, Ezeanolue EE: Building Sustainable Local Capacity for Global Health Research in West Africa. Ann Glob Health. 2016 Nov - Dec. PMID: 28314488

Fleyshman D, Cheney P, Ströse A, Mudambi S, Safina A, Commane M, Purmal A, Morgan K, Wang NJ, Gray J, Spellman PT, Issaeva N, Gurova K: ARTIK-52 induces replication-dependent DNA damage and p53 activation exclusively in cells of prostate and breast cancer origin. Cell Cycle. 2016; 2015 Dec 22. PMID: 26694952

Brown JA, Steitz JA: Intronless β-Globin Reporter: A Tool for Studying Nuclear RNA Stability Elements. Methods Mol Biol. 2016. PMID: 27236793

Schwam ZG, Judson BL: Improved prognosis for patients with oral cavity squamous cell carcinoma: Analysis of the National Cancer Database 1998-2006. Oral Oncol. 2016 Jan; 2015 Nov 6. PMID: 26553389

Shan H, Wang Z, Zhang F, Xiong Y, Yin CC, Sun F: A local-optimization refinement algorithm in single particle analysis for macromolecular complex with multiple rigid modules. Protein Cell. 2016 Jan; 2015 Dec 17. PMID: 26678751

Vilborg A, Passarelli MC, Steitz JA: Calcium signaling and transcription: elongation, DoGs, and eRNAs. Receptors Clin Investig. 2016; 2016 Feb 1. PMID: 29147672

Lascano J, Uchil PD, Mothes W, Luban J: TRIM5 Retroviral Restriction Activity Correlates with the Ability To Induce Innate Immune Signaling. J Virol. 2016 Jan 1; 2015 Oct 14. PMID: 26468522

Nachbagauer R, Miller MS, Hai R, Ryder AB, Rose JK, Palese P, García-Sastre A, Krammer F, Albrecht RA: Hemagglutinin Stalk Immunity Reduces Influenza Virus Replication and Transmission in Ferrets. J Virol. 2015 Dec 30; 2015 Dec 30. PMID: 26719251

Ryder AB, Nachbagauer R, Buonocore L, Palese P, Krammer F, Rose JK: Vaccination with Vesicular Stomatitis Virus-Vectored Chimeric Hemagglutinins Protects Mice against Divergent Influenza Virus Challenge Strains. J Virol. 2015 Dec 16; 2015 Dec 16. PMID: 26676789

Nowarski R, Jackson R, Gagliani N, de Zoete MR, Palm NW, Bailis W, Low JS, Harman CC, Graham M, Elinav E, Flavell RA: Epithelial IL-18 Equilibrium Controls Barrier Function in Colitis. Cell. 2015 Dec 3. PMID: 26638073

Blumberg J, Monjane L, Prasad M, Carrilho C, Judson BL: Investigation of the presence of HPV related oropharyngeal and oral tongue squamous cell carcinoma in Mozambique. Cancer Epidemiol. 2015 Dec; 2015 Nov 18. PMID: 26590333

Schwam ZG, Burtness B, Yarbrough WG, Mehra S, Husain Z, Judson BL: National treatment patterns in patients presenting with Stage IVC head and neck cancer: analysis of the National Cancer Database. Cancer Med. 2015 Dec; 2015 Oct 16. PMID: 26471244

Moss WN, Steitz JA: In silico discovery and modeling of non-coding RNA structure in viruses. Methods. 2015 Dec; 2015 Jun 23. PMID: 26116541

Amiram M, Haimovich AD, Fan C, Wang YS, Aerni HR, Ntai I, Moonan DW, Ma NJ, Rovner AJ, Hong SH, Kelleher NL, Goodman AL, Jewett MC, Söll D, Rinehart J, Isaacs FJ: Evolution of translation machinery in recoded bacteria enables multi-site incorporation of nonstandard amino acids. Nat Biotechnol. 2015 Dec; 2015 Nov 16. PMID: 26571098

Zhao C, Rajashankar KR, Marcia M, Pyle AM: Crystal structure of group II intron domain 1 reveals a template for RNA assembly. Nat Chem Biol. 2015 Dec; 2015 Oct 26. PMID: 26502156

Akgün KM, Kapo JM, Siegel MD: Critical Care at the End of Life. Semin Respir Crit Care Med. 2015 Dec; 2015 Nov 24. PMID: 26600274

DeBiasi EM, Akgün KM, Pisani M: Awake or Sedated: Trends in the Evaluation and Management of Agitation in the Intensive Care Unit. Semin Respir Crit Care Med. 2015 Dec; 2015 Nov 23. PMID: 26595050

Tan Y, Zanoni I, Cullen TW, Goodman AL, Kagan JC: Mechanisms of Toll-like Receptor 4 Endocytosis Reveal a Common Immune-Evasion Strategy Used by Pathogenic and Commensal Bacteria. Immunity. 2015 Nov 17; 2015 Nov 3. PMID: 26546281

Zhang X, van den Pol AN: Dopamine/Tyrosine Hydroxylase Neurons of the Hypothalamic Arcuate Nucleus Release GABA, Communicate with Dopaminergic and Other Arcuate Neurons, and Respond to Dynorphin, Met-Enkephalin, and Oxytocin. J Neurosci. 2015 Nov 11. PMID: 26558770

Binka M, Paintsil E, Patel A, Lindenbach BD, Heimer R: Survival of Hepatitis C Virus in Syringes Is Dependent on the Design of the Syringe-Needle and Dead Space Volume. PLoS One. 2015; 2015 Nov 4. PMID: 26536599

Carter DR, Murray J, Cheung BB, Gamble L, Koach J, Tsang J, Sutton S, Kalla H, Syed S, Gifford AJ, Issaeva N, Biktasova A, Atmadibrata B, Sun Y, Sokolowski N, Ling D, Kim PY, Webber H, Clark A, Ruhle M, Liu B, Oberthuer A, Fischer M, Byrne J, Saletta F, Thwe le M, Purmal A, Haderski G, Burkhart C, Speleman F, De Preter K, Beckers A, Ziegler DS, Liu T, Gurova KV, Gudkov AV, Norris MD, Haber M, Marshall GM: Therapeutic targeting of the MYC signal by inhibition of histone chaperone FACT in neuroblastoma. Sci Transl Med. 2015 Nov 4. PMID: 26537256

Attia EF, McGinnis KA, Feemster LC, Akgün KM, Butt AA, Graber CJ, Fine MJ, Goetz MB, Rodriguez-Barradas MC, Pisani MA, Tindle HA, Brown ST, Soo Hoo GW, Rimland D, Gibert CL, Huang L, Freiberg MS, Hough CL, Crothers K: Association of COPD With Risk for Pulmonary Infections Requiring Hospitalization in HIV-Infected Veterans. J Acquir Immune Defic Syndr. 2015 Nov 1. PMID: 26181820

Guo YE, Oei T, Steitz JA: Herpesvirus saimiri MicroRNAs Preferentially Target Host Cell Cycle Regulators. J Virol. 2015 Nov; 2015 Aug 19. PMID: 26292323

Schwam ZG, Husain Z, Judson BL: Refusal of postoperative radiotherapy and its association with survival in head and neck cancer. Radiother Oncol. 2015 Nov; 2015 Oct 24. PMID: 26508285

Tang C, Ji X, Wu L, Xiong Y: Impaired dNTPase activity of SAMHD1 by phosphomimetic mutation of Thr-592. J Biol Chem. 2015 Oct 30; 2015 Aug 20. PMID: 26294762

Sewald X, Ladinsky MS, Uchil PD, Beloor J, Pi R, Herrmann C, Motamedi N, Murooka TT, Brehm MA, Greiner DL, Shultz LD, Mempel TR, Bjorkman PJ, Kumar P, Mothes W: Retroviruses use CD169-mediated trans-infection of permissive lymphocytes to establish infection. Science. 2015 Oct 30; 2015 Oct 1. PMID: 26429886

White JR, Chang CC, So-Armah KA, Stewart JC, Gupta SK, Butt AA, Gibert CL, Rimland D, Rodriguez-Barradas MC, Leaf DA, Bedimo RJ, Gottdiener JS, Kop WJ, Gottlieb SS, Budoff MJ, Khambaty T, Tindle HA, Justice AC, Freiberg MS: Depression and human immunodeficiency virus infection are risk factors for incident heart failure among veterans: Veterans Aging Cohort Study. Circulation. 2015 Oct 27; 2015 Sep 10. PMID: 26358261

Monjarás Feria JV, Lefebre MD, Stierhof YD, Galán JE, Wagner S: Role of autocleavage in the function of a type III secretion specificity switch protein in Salmonella enterica serovar Typhimurium. MBio. 2015 Oct 13; 2015 Oct 13. PMID: 26463164

Speltz EB, Brown RS, Hajare HS, Schlieker C, Regan L: A designed repeat protein as an affinity capture reagent. Biochem Soc Trans. 2015 Oct. PMID: 26517897

Li M, Foli Y, Amakye NY, Klein T, Selvaraj S, Lu L, Paintsil E: Antiretroviral therapy-induced toxicity is associated with increased mRNA expression of telomerase. J Clin Pharmacol. 2015 Oct; 2015 May 28. PMID: 25903721

Reynolds TD, Buonocore L, Rose NF, Rose JK, Robek MD: Virus-Like Vesicle-Based Therapeutic Vaccine Vectors for Chronic Hepatitis B Virus Infection. J Virol. 2015 Oct; 2015 Aug 5. PMID: 26246574

Rawling DC, Fitzgerald ME, Pyle AM: Establishing the role of ATP for the function of the RIG-I innate immune sensor. Elife. 2015 Sep 15; 2015 Sep 15. PMID: 26371557

Lee N, Steitz JA: Noncoding RNA-guided recruitment of transcription factors: A prevalent but undocumented mechanism? Bioessays. 2015 Sep; 2015 Jul 22. PMID: 26200477

Kapo JM, Akgün KM: Integrating Palliative Care Into the Care of Patients With Advanced Lung Cancer. Cancer J. 2015 Sep-Oct. PMID: 26389769

Liu S, Jackson A, Beloor J, Kumar P, Sutton RE: Adenovirus-Vectored Broadly Neutralizing Antibodies Directed Against gp120 Prevent Human Immunodeficiency Virus Type 1 Acquisition in Humanized Mice. Hum Gene Ther. 2015 Sep; 2015 Aug 11. PMID: 25953321

Hayashi K, Sasai M, Iwasaki A: Toll-like receptor 9 trafficking and signaling for type I interferons requires PIKfyve activity. Int Immunol. 2015 Sep; 2015 Apr 29. PMID: 25925170

Kato J, Lefebre M, Galán JE: Structural Features Reminiscent of ATP-Driven Protein Translocases Are Essential for the Function of a Type III Secretion-Associated ATPase. J Bacteriol. 2015 Sep; 2015 Jul 13. PMID: 26170413

Iijima N, Iwasaki A: Tissue instruction for migration and retention of TRM cells. Trends Immunol. 2015 Sep; 2015 Aug 14. PMID: 26282885

Uzhachenko R, Shanker A, Yarbrough WG, Ivanova AV: Mitochondria, calcium, and tumor suppressor Fus1: At the crossroad of cancer, inflammation, and autoimmunity. Oncotarget. 2015 Aug 28. PMID: 26246474

Heim EN, Marston JL, Federman RS, Edwards AP, Karabadzhak AG, Petti LM, Engelman DM, DiMaio D: Biologically active LIL proteins built with minimal chemical diversity. Proc Natl Acad Sci U S A. 2015 Aug 25; 2015 Aug 10. PMID: 26261320

DiMaio D, Burd CG, Goodner K: Riding the R Train into the Cell. PLoS Pathog. 2015 Aug; 2015 Aug 20. PMID: 26291450

Vilborg A, Passarelli MC, Yario TA, Tycowski KT, Steitz JA: Widespread Inducible Transcription Downstream of Human Genes. Mol Cell. 2015 Aug 6; 2015 Jul 16. PMID: 26190259

Palm NW, de Zoete MR, Flavell RA: Immune-microbiota interactions in health and disease. Clin Immunol. 2015 Aug; 2015 Jun 30. PMID: 26141651

Viswanathan S, Justice AC, Alexander GC, Brown TT, Gandhi NR, McNicholl IR, Rimland D, Rodriguez-Barradas MC, Jacobson LP: Adherence and HIV RNA Suppression in the Current Era of Highly Active Antiretroviral Therapy. J Acquir Immune Defic Syndr. 2015 Aug 1. PMID: 25886923

Turner EM, Brown RS, Laudermilch E, Tsai PL, Schlieker C: The Torsin Activator LULL1 Is Required for Efficient Growth of Herpes Simplex Virus 1. J Virol. 2015 Aug; 2015 Jun 3. PMID: 26041288

Lodi S, Phillips A, Logan R, Olson A, Costagliola D, Abgrall S, van Sighem A, Reiss P, Miró JM, Ferrer E, Justice A, Gandhi N, Bucher HC, Furrer H, Moreno S, Monge S, Touloumi G, Pantazis N, Sterne J, Young JG, Meyer L, Seng R, Dabis F, Vandehende MA, Pérez-Hoyos S, Jarrín I, Jose S, Sabin C, Hernán MA, HIV-CAUSAL Collaboration.: Comparative effectiveness of immediate antiretroviral therapy versus CD4-based initiation in HIV-positive individuals in high-income countries: observational cohort study. Lancet HIV. 2015 Aug; 2015 Jul 7. PMID: 26423376

Schwam ZG, Sosa JA, Roman S, Judson BL: Complications and mortality following surgery for oral cavity cancer: analysis of 408 cases. Laryngoscope. 2015 Aug; 2015 Jun 9. PMID: 26063059

Iwasaki A: Balancing family life with a science career. Nat Immunol. 2015 Aug. PMID: 26194275

Farber SJ, Sutton RE: HIV+ patient on suppressive antiretroviral therapy with steroid injection-induced myopathy. AIDS. 2015 Jul 17. PMID: 26098599

Xie M, Zhang W, Shu MD, Xu A, Lenis DA, DiMaio D, Steitz JA: The host Integrator complex acts in transcription-independent maturation of herpesvirus microRNA 3' ends. Genes Dev. 2015 Jul 15. PMID: 26220997

Gagliani N, Amezcua Vesely MC, Iseppon A, Brockmann L, Xu H, Palm NW, de Zoete MR, Licona-Limón P, Paiva RS, Ching T, Weaver C, Zi X, Pan X, Fan R, Garmire LX, Cotton MJ, Drier Y, Bernstein B, Geginat J, Stockinger B, Esplugues E, Huber S, Flavell RA: Th17 cells transdifferentiate into regulatory T cells during resolution of inflammation. Nature. 2015 Jul 9; 2015 Apr 29. PMID: 25924064

Lo Re V 3rd, Kallan MJ, Tate JP, Lim JK, Goetz MB, Klein MB, Rimland D, Rodriguez-Barradas MC, Butt AA, Gibert CL, Brown ST, Park LS, Dubrow R, Reddy KR, Kostman JR, Justice AC, Localio AR: Predicting Risk of End-Stage Liver Disease in Antiretroviral-Treated Human Immunodeficiency Virus/Hepatitis C Virus-Coinfected Patients. Open Forum Infect Dis. 2015 Sep; 2015 Jul 9. PMID: 26284259

May MT, Justice AC, Birnie K, Ingle SM, Smit C, Smith C, Neau D, Guiguet M, Schwarze-Zander C, Moreno S, Guest JL, Monforte Ad, Tural C, Gill MJ, Bregenzer A, Kirk O, Saag M, Sterling TR, Crane HM, Sterne JA: Injection Drug Use and Hepatitis C as Risk Factors for Mortality in HIV-Infected Individuals: The Antiretroviral Therapy Cohort Collaboration. J Acquir Immune Defic Syndr. 2015 Jul 1. PMID: 25848927

Wollmann G, Drokhlyansky E, Davis JN, Cepko C, van den Pol AN: Lassa-vesicular stomatitis chimeric virus safely destroys brain tumors. J Virol. 2015 Jul; 2015 Apr 15. PMID: 25878115

Luryi AL, Chen MM, Mehra S, Roman SA, Sosa JA, Judson BL: Treatment Factors Associated With Survival in Early-Stage Oral Cavity Cancer: Analysis of 6830 Cases From the National Cancer Data Base. JAMA Otolaryngol Head Neck Surg. 2015 Jul. PMID: 25974757

Kwon YD, Pancera M, Acharya P, Georgiev IS, Crooks ET, Gorman J, Joyce MG, Guttman M, Ma X, Narpala S, Soto C, Terry DS, Yang Y, Zhou T, Ahlsen G, Bailer RT, Chambers M, Chuang GY, Doria-Rose NA, Druz A, Hallen MA, Harned A, Kirys T, Louder MK, O'Dell S, Ofek G, Osawa K, Prabhakaran M, Sastry M, Stewart-Jones GB, Stuckey J, Thomas PV, Tittley T, Williams C, Zhang B, Zhao H, Zhou Z, Donald BR, Lee LK, Zolla-Pazner S, Baxa U, Schön A, Freire E, Shapiro L, Lee KK, Arthos J, Munro JB, Blanchard SC, Mothes W, Binley JM, McDermott AB, Mascola JR, Kwong PD: Crystal structure, conformational fixation and entry-related interactions of mature ligand-free HIV-1 Env. Nat Struct Mol Biol. 2015 Jul; 2015 Jun 22. PMID: 26098315

Pimienta G, Fok V, Haslip M, Nagy M, Takyar S, Steitz JA: Proteomics and Transcriptomics of BJAB Cells Expressing the Epstein-Barr Virus Noncoding RNAs EBER1 and EBER2. PLoS One. 2015; 2015 Jun 29. PMID: 26121143

Yuh B, Tate J, Butt AA, Crothers K, Freiberg M, Leaf D, Logeais M, Rimland D, Rodriguez-Barradas MC, Ruser C, Justice AC: Weight change after antiretroviral therapy and mortality. Clin Infect Dis. 2015 Jun 15; 2015 Mar 11. PMID: 25761868

Reynolds NR, Ofori-Atta A, Lartey M, Renner L, Antwi S, Enimil A, Catlin AC, Fernando S, Kyriakides TC, Paintsil E: SANKOFA: a multisite collaboration on paediatric HIV disclosure in Ghana. AIDS. 2015 Jun. PMID: 26049537

Dukhovlinova E, Masharsky A, Toussova O, Verevochkin S, Solovyeva T, Meringof M, Paintsil E, White E, Barbour R, Heimer R, Kozlov A: Two Independent HIV Epidemics in Saint Petersburg, Russia Revealed by Molecular Epidemiology. AIDS Res Hum Retroviruses. 2015 Jun; 2015 Jan 5. PMID: 25417740

Vilarinho S, Taddei T: Therapeutic strategies for hepatocellular carcinoma: new advances and challenges. Curr Treat Options Gastroenterol. 2015 Jun. PMID: 25791207

Weisberg DF, Gordon KS, Barry DT, Becker WC, Crystal S, Edelman EJ, Gaither J, Gordon AJ, Goulet J, Kerns RD, Moore BA, Tate J, Justice AC, Fiellin DA: Long-term Prescription of Opioids and/or Benzodiazepines and Mortality Among HIV-Infected and Uninfected Patients. J Acquir Immune Defic Syndr. 2015 Jun 1. PMID: 26009831

Chen MM, Roman SA, Sosa JA, Judson BL: Predictors of Survival in Sinonasal Adenocarcinoma. J Neurol Surg B Skull Base. 2015 Jun; 2015 Jan 5. PMID: 26225303

Ströh LJ, Maginnis MS, Blaum BS, Nelson CD, Neu U, Gee GV, O'Hara BA, Motamedi N, DiMaio D, Atwood WJ, Stehle T: The Greater Affinity of JC Polyomavirus Capsid for α2,6-Linked Lactoseries Tetrasaccharide c than for Other Sialylated Glycans Is a Major Determinant of Infectivity. J Virol. 2015 Jun; 2015 Apr 8. PMID: 25855729

Munro JB, Mothes W: Structure and Dynamics of the Native HIV-1 Env Trimer. J Virol. 2015 Jun; 2015 Mar 11. PMID: 25762739

DiMaio D: Nuns, warts, viruses, and cancer. Yale J Biol Med. 2015 Jun; 2015 Jun 1. PMID: 26029011

Gopinath S, Iwasaki A: Cervicovaginal microbiota: simple is better. Immunity. 2015 May 19. PMID: 25992855

Sico JJ, Chang CC, So-Armah K, Justice AC, Hylek E, Skanderson M, McGinnis K, Kuller LH, Kraemer KL, Rimland D, Bidwell Goetz M, Butt AA, Rodriguez-Barradas MC, Gibert C, Leaf D, Brown ST, Samet J, Kazis L, Bryant K, Freiberg MS, Veterans Aging Cohort Study.: HIV status and the risk of ischemic stroke among men. Neurology. 2015 May 12; 2015 Apr 10. PMID: 25862803

Beloor J, Ramakrishna S, Nam K, Seon Choi C, Kim J, Kim SH, Cho HJ, Shin H, Kim H, Kim SW, Lee SK, Kumar P: Effective gene delivery into human stem cells with a cell-targeting Peptide-modified bioreducible polymer. Small. 2015 May 6; 2014 Dec 16. PMID: 25515928

Baldassarri R, Aronberg R, Levi AW, Yarbrough WG, Kowalski D, Chhieng D: Detection and genotype of high-risk human papillomavirus in fine-needle aspirates of patients with metastatic squamous cell carcinoma is helpful in determining tumor origin. Am J Clin Pathol. 2015 May. PMID: 25873503

Walker WE, Kurscheid S, Joshi S, Lopez CA, Goh G, Choi M, Barakat L, Francis J, Fisher A, Kozal M, Zapata H, Shaw A, Lifton R, Sutton RE, Fikrig E: Increased Levels of Macrophage Inflammatory Proteins Result in Resistance to R5-Tropic HIV-1 in a Subset of Elite Controllers. J Virol. 2015 May; 2015 Mar 4. PMID: 25740989

Wang EA, McGinnis KA, Goulet J, Bryant K, Gibert C, Leaf DA, Mattocks K, Fiellin LE, Vogenthaler N, Justice AC, Fiellin DA, Veterans Aging Cohort Study Project Team.: Food insecurity and health: data from the Veterans Aging Cohort Study. Public Health Rep. 2015 May-Jun. PMID: 25931630

Agosto LM, Uchil PD, Mothes W: HIV cell-to-cell transmission: effects on pathogenesis and antiretroviral therapy. Trends Microbiol. 2015 May; 2015 Mar 9. PMID: 25766144

West AP, Khoury-Hanold W, Staron M, Tal MC, Pineda CM, Lang SM, Bestwick M, Duguay BA, Raimundo N, MacDuff DA, Kaech SM, Smiley JR, Means RE, Iwasaki A, Shadel GS: Mitochondrial DNA stress primes the antiviral innate immune response. Nature. 2015 Apr 23; 2015 Feb 2. PMID: 25642965

Saglam O, Samayoa E, Somasekar S, Naccache S, Iwasaki A, Chiu CY: No viral association found in a set of differentiated vulvar intraepithelial neoplasia cases by human papillomavirus and pan-viral microarray testing. PLoS One. 2015; 2015 Apr 20. PMID: 25894343

Somarowthu S, Legiewicz M, Chillón I, Marcia M, Liu F, Pyle AM: HOTAIR forms an intricate and modular secondary structure. Mol Cell. 2015 Apr 16; 2015 Apr 9. PMID: 25866246

Kazakov T, Yang F, Ramanathan HN, Kohlway A, Diamond MS, Lindenbach BD: Hepatitis C virus RNA replication depends on specific cis- and trans-acting activities of viral nonstructural proteins. PLoS Pathog. 2015 Apr; 2015 Apr 13. PMID: 25875808

Ji X, Xiong Y: Two tales (tails) of SAMHD1 destruction by Vpx. Cell Host Microbe. 2015 Apr 8. PMID: 25856752

Jia X, Zhao Q, Xiong Y: HIV suppression by host restriction factors and viral immune evasion. Curr Opin Struct Biol. 2015 Apr; 2015 May 16. PMID: 25939065

DiMaio D: Zombies in TCGA. J Virol. 2015 Apr; 2015 Jan 28. PMID: 25631081

King JT Jr, Perkal MF, Rosenthal RA, Gordon AJ, Crystal S, Rodriguez-Barradas MC, Butt AA, Gibert CL, Rimland D, Simberkoff MS, Justice AC: Thirty-day postoperative mortality among individuals with HIV infection receiving antiretroviral therapy and procedure-matched, uninfected comparators. JAMA Surg. 2015 Apr. PMID: 25714794

Iwasaki A, Medzhitov R: Control of adaptive immunity by the innate immune system. Nat Immunol. 2015 Apr. PMID: 25789684

Farmer RW, McCall L, Civantos FJ, Myers JN, Yarbrough WG, Murphy B, O'Leary M, Zitsch R, Siegel BA: Lymphatic drainage patterns in oral squamous cell carcinoma: findings of the ACOSOG Z0360 (Alliance) study. Otolaryngol Head Neck Surg. 2015 Apr; 2015 Mar 6. PMID: 25749001

Pyle AM: Rediscovering RNA. RNA. 2015 Apr. PMID: 25780205

Steitz J: RNA-RNA base-pairing: theme and variations. RNA. 2015 Apr. PMID: 25780100

Baquero E, Albertini AA, Raux H, Buonocore L, Rose JK, Bressanelli S, Gaudin Y: Structure of the low pH conformation of Chandipura virus G reveals important features in the evolution of the vesiculovirus glycoprotein. PLoS Pathog. 2015 Mar; 2015 Mar 24. PMID: 25803715

VanDeusen A, Paintsil E, Agyarko-Poku T, Long EF: Cost effectiveness of option B plus for prevention of mother-to-child transmission of HIV in resource-limited countries: evidence from Kumasi, Ghana. BMC Infect Dis. 2015 Mar 18; 2015 Mar 18. PMID: 25887574

Hu Y, O'Boyle K, Palmer D, Ng P, Sutton RE: High-level production of replication-defective human immunodeficiency type 1 virus vector particles using helper-dependent adenovirus vectors. Mol Ther Methods Clin Dev. 2015; 2015 Mar 18. PMID: 26029715

Isken O, Langerwisch U, Jirasko V, Rehders D, Redecke L, Ramanathan H, Lindenbach BD, Bartenschlager R, Tautz N: A conserved NS3 surface patch orchestrates NS2 protease stimulation, NS5A hyperphosphorylation and HCV genome replication. PLoS Pathog. 2015 Mar; 2015 Mar 16. PMID: 25774920

Abraham AG, Althoff KN, Jing Y, Estrella MM, Kitahata MM, Wester CW, Bosch RJ, Crane H, Eron J, Gill MJ, Horberg MA, Justice AC, Klein M, Mayor AM, Moore RD, Palella FJ, Parikh CR, Silverberg MJ, Golub ET, Jacobson LP, Napravnik S, Lucas GM, North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) of the International Epidemiologic Databases to Evaluate AIDS (IeDEA).: End-stage renal disease among HIV-infected adults in North America. Clin Infect Dis. 2015 Mar 15; 2014 Nov 18. PMID: 25409471

Tycowski KT, Guo YE, Lee N, Moss WN, Vallery TK, Xie M, Steitz JA: Viral noncoding RNAs: more surprises. Genes Dev. 2015 Mar 15. PMID: 25792595

Nguyen HC, Yang H, Fribourgh JL, Wolfe LS, Xiong Y: Insights into Cullin-RING E3 ubiquitin ligase recruitment: structure of the VHL-EloBC-Cul2 complex. Structure. 2015 Mar 3; 2015 Feb 5. PMID: 25661653

Wang EA, McGinnis KA, Long JB, Akgün KM, Edelman EJ, Rimland D, Wang KH, Justice AC, Fiellin DA: Incarceration and health outcomes in HIV-infected patients: the impact of substance use, primary care engagement, and antiretroviral adherence. Am J Addict. 2015 Mar; 2015 Feb 6. PMID: 25662297

Marshall BD, Operario D, Bryant KJ, Cook RL, Edelman EJ, Gaither JR, Gordon AJ, Kahler CW, Maisto SA, McGinnis KA, van den Berg JJ, Zaller ND, Justice AC, Fiellin DA: Drinking trajectories among HIV-infected men who have sex with men: a cohort study of United States veterans. Drug Alcohol Depend. 2015 Mar 1; 2015 Jan 2. PMID: 25596785

Schutt CA, Paskhover B, Judson BL: Intraoperative Vagus Nerve Monitoring: A Transnasal Technique during Skull Base Surgery. J Neurol Surg B Skull Base. 2015 Mar; 2014 Sep 29. PMID: 25844292

Ryder AB, Buonocore L, Vogel L, Nachbagauer R, Krammer F, Rose JK: A viable recombinant rhabdovirus lacking its glycoprotein gene and expressing influenza virus hemagglutinin and neuraminidase is a potent influenza vaccine. J Virol. 2015 Mar; 2014 Dec 24. PMID: 25540378

Binka M, Paintsil E, Patel A, Lindenbach BD, Heimer R: Disinfection of syringes contaminated with hepatitis C virus by rinsing with household products. Open Forum Infect Dis. 2015 Jan; 2015 Feb 23. PMID: 26034767

Popa A, Zhang W, Harrison MS, Goodner K, Kazakov T, Goodwin EC, Lipovsky A, Burd CG, DiMaio D: Direct binding of retromer to human papillomavirus type 16 minor capsid protein L2 mediates endosome exit during viral infection. PLoS Pathog. 2015 Feb; 2015 Feb 18. PMID: 25693203

Kashem SW, Igyarto BZ, Gerami-Nejad M, Kumamoto Y, Mohammed JA, Jarrett E, Drummond RA, Zurawski SM, Zurawski G, Berman J, Iwasaki A, Brown GD, Kaplan DH: Candida albicans morphology and dendritic cell subsets determine T helper cell differentiation. Immunity. 2015 Feb 17; 2015 Feb 10. PMID: 25680275

Althoff KN, McGinnis KA, Wyatt CM, Freiberg MS, Gilbert C, Oursler KK, Rimland D, Rodriguez-Barradas MC, Dubrow R, Park LS, Skanderson M, Shiels MS, Gange SJ, Gebo KA, Justice AC, Veterans Aging Cohort Study (VACS).: Comparison of risk and age at diagnosis of myocardial infarction, end-stage renal disease, and non-AIDS-defining cancer in HIV-infected versus uninfected adults. Clin Infect Dis. 2015 Feb 15; 2014 Oct 30. PMID: 25362204

Lee N, Moss WN, Yario TA, Steitz JA: EBV noncoding RNA binds nascent RNA to drive host PAX5 to viral DNA. Cell. 2015 Feb 12; 2015 Feb 5. PMID: 25662012

Geretti AM, Paredes R, Kozal MJ: Transmission of HIV drug resistance: lessons from sensitive screening assays. Curr Opin Infect Dis. 2015 Feb. PMID: 25501541

Lu X, Yarbrough WG: Negative regulation of RelA phosphorylation: emerging players and their roles in cancer. Cytokine Growth Factor Rev. 2015 Feb; 2014 Oct 2. PMID: 25438737

Paisible AL, Chang CC, So-Armah KA, Butt AA, Leaf DA, Budoff M, Rimland D, Bedimo R, Goetz MB, Rodriguez-Barradas MC, Crane HM, Gibert CL, Brown ST, Tindle HA, Warner AL, Alcorn C, Skanderson M, Justice AC, Freiberg MS: HIV infection, cardiovascular disease risk factor profile, and risk for acute myocardial infarction. J Acquir Immune Defic Syndr. 2015 Feb 1. PMID: 25588033

Butt AA, Yan P, Lo Re V 3rd, Rimland D, Goetz MB, Leaf D, Freiberg MS, Klein MB, Justice AC, Sherman KE, ERCHIVES (Electronically Retrieved Cohort of HCV Infected Veterans) Study Team.: Liver fibrosis progression in hepatitis C virus infection after seroconversion. JAMA Intern Med. 2015 Feb. PMID: 25485735

Chen MM, Roman SA, Sosa JA, Judson BL: The role of adjuvant therapy in the management of head and neck merkel cell carcinoma: an analysis of 4815 patients. JAMA Otolaryngol Head Neck Surg. 2015 Feb. PMID: 25474617

Justice A, Freiberg MS, Lo Re V: Should everyone ageing with HIV take a statin? Lancet HIV. 2015 Feb; 2015 Jan 9. PMID: 26424457

Aronberg RM, Punekar SR, Adam SI, Judson BL, Mehra S, Yarbrough WG: Esophageal perforation caused by edible foreign bodies: a systematic review of the literature. Laryngoscope. 2015 Feb; 2014 Aug 22. PMID: 25155167

Mehra S, Tuttle RM, Milas M, Orloff L, Bergman D, Bernet V, Brett E, Cobin R, Doherty G, Judson BL, Klopper J, Lee S, Lupo M, Machac J, Mechanick JI, Randolph G, Ross DS, Smallridge R, Terris D, Tufano R, Alon E, Clain J, DosReis L, Scherl S, Urken ML: Database and registry research in thyroid cancer: striving for a new and improved national thyroid cancer database. Thyroid. 2015 Feb; 2015 Jan 16. PMID: 25517683

Schell JB, Bahl K, Folta-Stogniew E, Rose N, Buonocore L, Marx PA, Gambhira R, Rose JK: Antigenic requirement for Gag in a vaccine that protects against high-dose mucosal challenge with simian immunodeficiency virus. Virology. 2015 Feb; 2015 Jan 12. PMID: 25591175

Tewary SK, Liang L, Lin Z, Lynn A, Cotmore SF, Tattersall P, Zhao H, Tang L: Structures of minute virus of mice replication initiator protein N-terminal domain: Insights into DNA nicking and origin binding. Virology. 2015 Feb; 2014 Dec 18. PMID: 25528417

Chang H, Tate J, Justice AC, Ohl ME: Medicare and Medicaid enrollment and outside hospitalizations among HIV-infected and uninfected veterans engaged in VA care: a retrospective cohort study. BMC Health Serv Res. 2015 Jan 22; 2015 Jan 22. PMID: 25608566

Zeller S, Choi CS, Uchil PD, Ban HS, Siefert A, Fahmy TM, Mothes W, Lee SK, Kumar P: Attachment of cell-binding ligands to arginine-rich cell-penetrating peptides enables cytosolic translocation of complexed siRNA. Chem Biol. 2015 Jan 22; 2014 Dec 24. PMID: 25544044

Foxman EF, Storer JA, Fitzgerald ME, Wasik BR, Hou L, Zhao H, Turner PE, Pyle AM, Iwasaki A: Temperature-dependent innate defense against the common cold virus limits viral replication at warm temperature in mouse airway cells. Proc Natl Acad Sci U S A. 2015 Jan 20; 2015 Jan 5. PMID: 25561542

Deng K, Pertea M, Rongvaux A, Wang L, Durand CM, Ghiaur G, Lai J, McHugh HL, Hao H, Zhang H, Margolick JB, Gurer C, Murphy AJ, Valenzuela DM, Yancopoulos GD, Deeks SG, Strowig T, Kumar P, Siliciano JD, Salzberg SL, Flavell RA, Shan L, Siliciano RF: Broad CTL response is required to clear latent HIV-1 due to dominance of escape mutations. Nature. 2015 Jan 15; 2015 Jan 7. PMID: 25561180

Wollmann G, Paglino JC, Maloney PR, Ahmadi SA, van den Pol AN: Attenuation of vesicular stomatitis virus infection of brain using antiviral drugs and an adeno-associated virus-interferon vector. Virology. 2015 Jan 15; 2014 Nov 21. PMID: 25462341

Alazami AM, Patel N, Shamseldin HE, Anazi S, Al-Dosari MS, Alzahrani F, Hijazi H, Alshammari M, Aldahmesh MA, Salih MA, Faqeih E, Alhashem A, Bashiri FA, Al-Owain M, Kentab AY, Sogaty S, Al Tala S, Temsah MH, Tulbah M, Aljelaify RF, Alshahwan SA, Seidahmed MZ, Alhadid AA, Aldhalaan H, AlQallaf F, Kurdi W, Alfadhel M, Babay Z, Alsogheer M, Kaya N, Al-Hassnan ZN, Abdel-Salam GM, Al-Sannaa N, Al Mutairi F, El Khashab HY, Bohlega S, Jia X, Nguyen HC, Hammami R, Adly N, Mohamed JY, Abdulwahab F, Ibrahim N, Naim EA, Al-Younes B, Meyer BF, Hashem M, Shaheen R, Xiong Y, Abouelhoda M, Aldeeri AA, Monies DM, Alkuraya FS: Accelerating novel candidate gene discovery in neurogenetic disorders via whole-exome sequencing of prescreened multiplex consanguineous families. Cell Rep. 2015 Jan 13; 2014 Dec 31. PMID: 25558065

Catlin AC, Fernando S, Gamage R, Renner L, Antwi S, Tettey JK, Amisah KA, Kyriakides T, Cong X, Reynolds NR, Paintsil E: Sankofa pediatric HIV disclosure intervention cyber data management: building capacity in a resource-limited setting and ensuring data quality. AIDS Care. 2015. PMID: 26616131

Paintsil E, Renner L, Antwi S, Dame J, Enimil A, Ofori-Atta A, Alhassan A, Ofori IP, Cong X, Kyriakides T, Reynolds NR: HIV knowledge, stigma, and illness beliefs among pediatric caregivers in Ghana who have not disclosed their child's HIV status. AIDS Care. 2015. PMID: 26616122

Badejo OA, Chang CC, So-Armah KA, Tracy RP, Baker JV, Rimland D, Butt AA, Gordon AJ, Rinaldo CR Jr, Kraemer K, Samet JH, Tindle HA, Goetz MB, Rodriguez-Barradas MC, Bedimo R, Gibert CL, Leaf DA, Kuller LH, Deeks SG, Justice AC, Freiberg MS: CD8+ T-cells count in acute myocardial infarction in HIV disease in a predominantly male cohort. Biomed Res Int. 2015; 2015 Jan 19. PMID: 25688354

Rose AE, Brown RS, Schlieker C: Torsins: not your typical AAA+ ATPases. Crit Rev Biochem Mol Biol. 2015; 2015 Oct 13. PMID: 26592310

McKenzie J, El-Guindy A: Epstein-Barr Virus Lytic Cycle Reactivation. Curr Top Microbiol Immunol. 2015. PMID: 26428377

Chen MM, Roman SA, Sosa JA, Judson BL: Prognostic factors for squamous cell cancer of the parotid gland: an analysis of 2104 patients. Head Neck. 2015 Jan; 2014 Feb 12. PMID: 24339135

Gega A, Kozal MJ, Chiarella J, Lee E, Peterson J, Hecht FM, Liegler T, St John EP, Simen BB, Price RW, Spudich SS: Deep sequencing of HIV-1 variants from paired plasma and cerebrospinal fluid during primary HIV infection. J Virus Erad. 2015. PMID: 26855971

Chillón I, Marcia M, Legiewicz M, Liu F, Somarowthu S, Pyle AM: Native Purification and Analysis of Long RNAs. Methods Enzymol. 2015; 2015 Feb 27. PMID: 26068736

Lipovsky A, Zhang W, Iwasaki A, DiMaio D: Application of the proximity-dependent assay and fluorescence imaging approaches to study viral entry pathways. Methods Mol Biol. 2015. PMID: 25702134

Langs-Barlow A, Selvaraj S, Ogbuagu O, Shabanova V, Shapiro ED, Paintsil E: Association of circulating cytochrome c with clinical manifestations of antiretroviral-induced toxicity. Mitochondrion. 2015 Jan; 2014 Nov 28. PMID: 25435346

Beloor J, Zeller S, Choi CS, Lee SK, Kumar P: Cationic cell-penetrating peptides as vehicles for siRNA delivery. Ther Deliv. 2015. PMID: 25996046

Rongvaux A, Jackson R, Harman CC, Li T, West AP, de Zoete MR, Wu Y, Yordy B, Lakhani SA, Kuan CY, Taniguchi T, Shadel GS, Chen ZJ, Iwasaki A, Flavell RA: Apoptotic caspases prevent the induction of type I interferons by mitochondrial DNA. Cell. 2014 Dec 18. PMID: 25525875

Zhao Q, Xue X, Longerich S, Sung P, Xiong Y: Structural insights into 5' flap DNA unwinding and incision by the human FAN1 dimer. Nat Commun. 2014 Dec 11; 2014 Dec 11. PMID: 25500724

Deng L, Song J, Gao X, Wang J, Yu H, Chen X, Varki N, Naito-Matsui Y, Galán JE, Varki A: Host adaptation of a bacterial toxin from the human pathogen Salmonella Typhi. Cell. 2014 Dec 4. PMID: 25480294

Brooks JF 2nd, Gyllborg MC, Cronin DC, Quillin SJ, Mallama CA, Foxall R, Whistler C, Goodman AL, Mandel MJ: Global discovery of colonization determinants in the squid symbiont Vibrio fischeri. Proc Natl Acad Sci U S A. 2014 Dec 2; 2014 Nov 17. PMID: 25404340

Attia EF, Akgün KM, Wongtrakool C, Goetz MB, Rodriguez-Barradas MC, Rimland D, Brown ST, Soo Hoo GW, Kim J, Lee PJ, Schnapp LM, Sharafkhaneh A, Justice AC, Crothers K: Increased risk of radiographic emphysema in HIV is associated with elevated soluble CD14 and nadir CD4. Chest. 2014 Dec. PMID: 25080158

Akgün KM, Tate JP, Crothers K, Crystal S, Leaf DA, Womack J, Brown TT, Justice AC, Oursler KK: An adapted frailty-related phenotype and the VACS index as predictors of hospitalization and mortality in HIV-infected and uninfected individuals. J Acquir Immune Defic Syndr. 2014 Dec 1. PMID: 25202921

Yarbrough WG, Sewell A, Tickle E, Rhinehardt E, Harkleroad R, Bennett M, Johnson D, Wen L, Pfeiffer M, Benegas M, Morath J: A tool to determine financial impact of adverse events in health care: healthcare quality calculator. J Patient Saf. 2014 Dec. PMID: 24080720

Luryi AL, Chen MM, Mehra S, Roman SA, Sosa JA, Judson BL: Positive surgical margins in early stage oral cavity cancer: an analysis of 20,602 cases. Otolaryngol Head Neck Surg. 2014 Dec; 2014 Sep 25. PMID: 25257901

Rose NF, Buonocore L, Schell JB, Chattopadhyay A, Bahl K, Liu X, Rose JK: In vitro evolution of high-titer, virus-like vesicles containing a single structural protein. Proc Natl Acad Sci U S A. 2014 Nov 25; 2014 Nov 10. PMID: 25385608

Fribourgh JL, Nguyen HC, Matreyek KA, Alvarez FJD, Summers BJ, Dewdney TG, Aiken C, Zhang P, Engelman A, Xiong Y: Structural insight into HIV-1 restriction by MxB. Cell Host Microbe. 2014 Nov 12; 2014 Oct 9. PMID: 25312384

Brown RS, Zhao C, Chase AR, Wang J, Schlieker C: The mechanism of Torsin ATPase activation. Proc Natl Acad Sci U S A. 2014 Nov 11; 2014 Oct 28. PMID: 25352667

Munro JB, Gorman J, Ma X, Zhou Z, Arthos J, Burton DR, Koff WC, Courter JR, Smith AB 3rd, Kwong PD, Blanchard SC, Mothes W: Conformational dynamics of single HIV-1 envelope trimers on the surface of native virions. Science. 2014 Nov 7; 2014 Oct 8. PMID: 25298114

Degnan PH, Taga ME, Goodman AL: Vitamin B12 as a modulator of gut microbial ecology. Cell Metab. 2014 Nov 4; 2014 Nov 4. PMID: 25440056

Cotmore SF, Tattersall P: Parvoviruses: Small Does Not Mean Simple. Annu Rev Virol. 2014 Nov; 2014 Jul 9. PMID: 26958732

Patel N, El Mouzan MI, Al-Mayouf SM, Adly N, Mohamed JY, Al Mofarreh MA, Ibrahim N, Xiong Y, Zhao Q, Al-Saleem KA, Alkuraya FS: Study of Mendelian forms of Crohn's disease in Saudi Arabia reveals novel risk loci and alleles. Gut. 2014 Nov; 2014 Aug 21. PMID: 25147203

Gaither JR, Goulet JL, Becker WC, Crystal S, Edelman EJ, Gordon K, Kerns RD, Rimland D, Skanderson M, Weisberg DF, Justice AC, Fiellin DA: Guideline-concordant management of opioid therapy among human immunodeficiency virus (HIV)-infected and uninfected veterans. J Pain. 2014 Nov; 2014 Aug 23. PMID: 25152300

Mihaylov IS, Cotmore SF, Tattersall P: Complementation for an essential ancillary non-structural protein function across parvovirus genera. Virology. 2014 Nov; 2014 Sep 6. PMID: 25194919

Gambhira R, Keele BF, Schell JB, Hunter MJ, Dufour JP, Montefiori DC, Tang H, Rose JK, Rose N, Marx PA: Transmitted/founder simian immunodeficiency virus envelope sequences in vesicular stomatitis and Semliki forest virus vector immunized rhesus macaques. PLoS One. 2014; 2014 Oct 31. PMID: 25360552

Longerich S, Li J, Xiong Y, Sung P, Kupfer GM: Stress and DNA repair biology of the Fanconi anemia pathway. Blood. 2014 Oct 30; 2014 Sep 18. PMID: 25237197

Parfenov M, Pedamallu CS, Gehlenborg N, Freeman SS, Danilova L, Bristow CA, Lee S, Hadjipanayis AG, Ivanova EV, Wilkerson MD, Protopopov A, Yang L, Seth S, Song X, Tang J, Ren X, Zhang J, Pantazi A, Santoso N, Xu AW, Mahadeshwar H, Wheeler DA, Haddad RI, Jung J, Ojesina AI, Issaeva N, Yarbrough WG, Hayes DN, Grandis JR, El-Naggar AK, Meyerson M, Park PJ, Chin L, Seidman JG, Hammerman PS, Kucherlapati R, Cancer Genome Atlas Network.: Characterization of HPV and host genome interactions in primary head and neck cancers. Proc Natl Acad Sci U S A. 2014 Oct 28; 2014 Oct 13. PMID: 25313082

Pancera M, Zhou T, Druz A, Georgiev IS, Soto C, Gorman J, Huang J, Acharya P, Chuang GY, Ofek G, Stewart-Jones GB, Stuckey J, Bailer RT, Joyce MG, Louder MK, Tumba N, Yang Y, Zhang B, Cohen MS, Haynes BF, Mascola JR, Morris L, Munro JB, Blanchard SC, Mothes W, Connors M, Kwong PD: Structure and immune recognition of trimeric pre-fusion HIV-1 Env. Nature. 2014 Oct 23; 2014 Oct 8. PMID: 25296255

Langs-Barlow A, Paintsil E: Impact of human immunodeficiency virus type-1 sequence diversity on antiretroviral therapy outcomes. Viruses. 2014 Oct 20; 2014 Oct 20. PMID: 25333465

de Zoete MR, Palm NW, Zhu S, Flavell RA: Inflammasomes. Cold Spring Harb Perspect Biol. 2014 Oct 16; 2014 Oct 16. PMID: 25324215

Womack JA, Chang CC, So-Armah KA, Alcorn C, Baker JV, Brown ST, Budoff M, Butt AA, Gibert C, Goetz MB, Gottdiener J, Gottlieb S, Justice AC, Leaf D, McGinnis K, Rimland D, Rodriguez-Barradas MC, Sico J, Skanderson M, Tindle H, Tracy RP, Warner A, Freiberg MS: HIV infection and cardiovascular disease in women. J Am Heart Assoc. 2014 Oct 16; 2014 Oct 16. PMID: 25324353

Lo Re V 3rd, Tate JP, Lim JK, Fiellin DA, Justice AC: Reply to Marcellin et al. Clin Infect Dis. 2014 Oct 15; 2014 Jul 11. PMID: 25015914

Ji X, Tang C, Zhao Q, Wang W, Xiong Y: Structural basis of cellular dNTP regulation by SAMHD1. Proc Natl Acad Sci U S A. 2014 Oct 14; 2014 Sep 29. PMID: 25267621

Iijima N, Iwasaki A: T cell memory. A local macrophage chemokine network sustains protective tissue-resident memory CD4 T cells. Science. 2014 Oct 3; 2014 Aug 28. PMID: 25170048

Pyle AM: Looking at LncRNAs with the ribozyme toolkit. Mol Cell. 2014 Oct 2. PMID: 25280101

Guo YE, Steitz JA: Virus meets host microRNA: the destroyer, the booster, the hijacker. Mol Cell Biol. 2014 Oct; 2014 Jul 21. PMID: 25047834

Rawling DC, Kohlway AS, Luo D, Ding SC, Pyle AM: The RIG-I ATPase core has evolved a functional requirement for allosteric stabilization by the Pincer domain. Nucleic Acids Res. 2014 Oct; 2014 Sep 12. PMID: 25217590

Zhang W, Kazakov T, Popa A, DiMaio D: Vesicular trafficking of incoming human papillomavirus 16 to the Golgi apparatus and endoplasmic reticulum requires γ-secretase activity. MBio. 2014 Sep 16; 2014 Sep 16. PMID: 25227470

Gupta S, Lataillade M, Kyriakides TC, Chiarella J, St John EP, Webb S, Moreno EA, Simen BB, Kozal MJ: Low-frequency NNRTI-resistant HIV-1 variants and relationship to mutational load in antiretroviral-naïve subjects. Viruses. 2014 Sep 16; 2014 Sep 16. PMID: 25256391

Uchil PD, Pawliczek T, Reynolds TD, Ding S, Hinz A, Munro JB, Huang F, Floyd RW, Yang H, Hamilton WL, Bewersdorf J, Xiong Y, Calderwood DA, Mothes W: TRIM15 is a focal adhesion protein that regulates focal adhesion disassembly. J Cell Sci. 2014 Sep 15; 2014 Jul 11. PMID: 25015296

Boulle A, Schomaker M, May MT, Hogg RS, Shepherd BE, Monge S, Keiser O, Lampe FC, Giddy J, Ndirangu J, Garone D, Fox M, Ingle SM, Reiss P, Dabis F, Costagliola D, Castagna A, Ehren K, Campbell C, Gill MJ, Saag M, Justice AC, Guest J, Crane HM, Egger M, Sterne JA: Mortality in patients with HIV-1 infection starting antiretroviral therapy in South Africa, Europe, or North America: a collaborative analysis of prospective studies. PLoS Med. 2014 Sep; 2014 Sep 9. PMID: 25203931

Federman DG, Kravetz JD, Lerz KA, Akgun KM, Ruser C, Cain H, Anderson EF, Taylor C: Implementation of an electronic clinical reminder to improve rates of lung cancer screening. Am J Med. 2014 Sep; 2014 Apr 24. PMID: 24769298

Carney DW, Nelson CD, Ferris BD, Stevens JP, Lipovsky A, Kazakov T, DiMaio D, Atwood WJ, Sello JK: Structural optimization of a retrograde trafficking inhibitor that protects cells from infections by human polyoma- and papillomaviruses. Bioorg Med Chem. 2014 Sep 1; 2014 Jul 10. PMID: 25087050

Chen MM, Roman SA, Sosa JA, Judson BL: Predictors of survival in carcinoma ex pleomorphic adenoma. Head Neck. 2014 Sep; 2014 Apr 3. PMID: 23956034

Gagliani N, Palm NW, de Zoete MR, Flavell RA: Inflammasomes and intestinal homeostasis: regulating and connecting infection, inflammation and the microbiota. Int Immunol. 2014 Sep; 2014 Jun 19. PMID: 24948595

Petersen M, Yiannoutsos CT, Justice A, Egger M: Observational research on NCDs in HIV-positive populations: conceptual and methodological considerations. J Acquir Immune Defic Syndr. 2014 Sep 1. PMID: 25117964

Li F, Sewald X, Jin J, Sherer NM, Mothes W: Murine leukemia virus Gag localizes to the uropod of migrating primary lymphocytes. J Virol. 2014 Sep; 2014 Jun 25. PMID: 24965475

Kohlway A, Pirakitikulr N, Ding SC, Yang F, Luo D, Lindenbach BD, Pyle AM: The linker region of NS3 plays a critical role in the replication and infectivity of hepatitis C virus. J Virol. 2014 Sep; 2014 Jun 25. PMID: 24965468

Cordek DG, Croom-Perez TJ, Hwang J, Hargittai MR, Subba-Reddy CV, Han Q, Lodeiro MF, Ning G, McCrory TS, Arnold JJ, Koc H, Lindenbach BD, Showalter SA, Cameron CE: Expanding the proteome of an RNA virus by phosphorylation of an intrinsically disordered viral protein. J Biol Chem. 2014 Aug 29; 2014 Jul 16. PMID: 25031324

Palm NW, de Zoete MR, Cullen TW, Barry NA, Stefanowski J, Hao L, Degnan PH, Hu J, Peter I, Zhang W, Ruggiero E, Cho JH, Goodman AL, Flavell RA: Immunoglobulin A coating identifies colitogenic bacteria in inflammatory bowel disease. Cell. 2014 Aug 28. PMID: 25171403

El-Guindy A, Lopez-Giraldez F, Delecluse HJ, McKenzie J, Miller G: A locus encompassing the Epstein-Barr virus bglf4 kinase regulates expression of genes encoding viral structural proteins. PLoS Pathog. 2014 Aug; 2014 Aug 28. PMID: 25166506

Moser R, Xu C, Kao M, Annis J, Lerma LA, Schaupp CM, Gurley KE, Jang IS, Biktasova A, Yarbrough WG, Margolin AA, Grandori C, Kemp CJ, Méndez E: Functional kinomics identifies candidate therapeutic targets in head and neck cancer. Clin Cancer Res. 2014 Aug 15. PMID: 25125259

Russell AB, Wexler AG, Harding BN, Whitney JC, Bohn AJ, Goo YA, Tran BQ, Barry NA, Zheng H, Peterson SB, Chou S, Gonen T, Goodlett DR, Goodman AL, Mougous JD: A type VI secretion-related pathway in Bacteroidetes mediates interbacterial antagonism. Cell Host Microbe. 2014 Aug 13; 2014 Jul 25. PMID: 25070807

Rathinavelan T, Lara-Tejero M, Lefebre M, Chatterjee S, McShan AC, Guo DC, Tang C, Galan JE, De Guzman RN: NMR model of PrgI-SipD interaction and its implications in the needle-tip assembly of the Salmonella type III secretion system. J Mol Biol. 2014 Aug 12; 2014 Jun 18. PMID: 24951833

Fitzgerald ME, Rawling DC, Vela A, Pyle AM: An evolving arsenal: viral RNA detection by RIG-I-like receptors. Curr Opin Microbiol. 2014 Aug; 2014 Jun 7. PMID: 24912143

Khan S, Toyoda H, Linehan M, Iwasaki A, Nomoto A, Bernhardt G, Cello J, Wimmer E: Poliomyelitis in transgenic mice expressing CD155 under the control of the Tage4 promoter after oral and parenteral poliovirus inoculation. J Gen Virol. 2014 Aug; 2014 Apr 30. PMID: 24784416

Vollmers EM, D'Abramo A Jr, Cotmore SF, Tattersall P: Genome sequence of tumor virus x, a member of the genus protoparvovirus in the family parvoviridae. Genome Announc. 2014 Jul 31; 2014 Jul 31. PMID: 25081268

Munro JB, Mothes W: The HIV-1 Env trimer in HD. Structure. 2014 Jul 8. PMID: 25007222

Justice A, Falutz J: Aging and HIV: an evolving understanding. Curr Opin HIV AIDS. 2014 Jul. PMID: 24871091

Park LS, Tate JP, Rodriguez-Barradas MC, Rimland D, Goetz MB, Gibert C, Brown ST, Kelley MJ, Justice AC, Dubrow R: Cancer Incidence in HIV-Infected Versus Uninfected Veterans: Comparison of Cancer Registry and ICD-9 Code Diagnoses. J AIDS Clin Res. 2014 Jul. PMID: 25580366

Luryi AL, Yarbrough WG, Niccolai LM, Roser S, Reed SG, Nathan CA, Moore MG, Day T, Judson BL: Public awareness of head and neck cancers: a cross-sectional survey. JAMA Otolaryngol Head Neck Surg. 2014 Jul. PMID: 24902640

Brown JA, Bulkley D, Wang J, Valenstein ML, Yario TA, Steitz TA, Steitz JA: Structural insights into the stabilization of MALAT1 noncoding RNA by a bipartite triple helix. Nat Struct Mol Biol. 2014 Jul; 2014 Jun 22. PMID: 24952594

Guo YE, Steitz JA: 3'-Biotin-tagged microRNA-27 does not associate with Argonaute proteins in cells. RNA. 2014 Jul; 2014 May 12. PMID: 24821854

Gao B, Lara-Tejero M, Lefebre M, Goodman AL, Galán JE: Novel components of the flagellar system in epsilonproteobacteria. MBio. 2014 Jun 24; 2014 Jun 24. PMID: 24961693

Aldahmesh MA, Li Y, Alhashem A, Anazi S, Alkuraya H, Hashem M, Awaji AA, Sogaty S, Alkharashi A, Alzahrani S, Al Hazzaa SA, Xiong Y, Kong S, Sun Z, Alkuraya FS: IFT27, encoding a small GTPase component of IFT particles, is mutated in a consanguineous family with Bardet-Biedl syndrome. Hum Mol Genet. 2014 Jun 15; 2014 Jan 31. PMID: 24488770

Shaheen R, Rahbeeni Z, Alhashem A, Faqeih E, Zhao Q, Xiong Y, Almoisheer A, Al-Qattan SM, Almadani HA, Al-Onazi N, Al-Baqawi BS, Saleh MA, Alkuraya FS: Neu-Laxova syndrome, an inborn error of serine metabolism, is caused by mutations in PHGDH. Am J Hum Genet. 2014 Jun 5; 2014 May 15. PMID: 24836451

Xiaobai Z, Xi C, Tian H, Williams AB, Wang H, He J, Zhen J, Chiarella J, Blake LA, Turenchalk G, Kozal MJ: Prevalence of WHO transmitted drug resistance mutations by deep sequencing in antiretroviral-naïve subjects in Hunan Province, China. PLoS One. 2014; 2014 Jun 4. PMID: 24896087

Parker CG, Dahlgren MK, Tao RN, Li DT, Douglass EF Jr, Shoda T, Jawanda N, Spasov KA, Lee S, Zhou N, Domaoal RA, Sutton RE, Anderson KS, Jorgensen WL, Krystal M, Spiegel DA: Illuminating HIV gp120-Ligand Recognition through Computationally-Driven Optimization of Antibody-Recruiting Molecules. Chem Sci. 2014 Jun 1. PMID: 25379167

Yarbrough WG, Rosenthal E: Conclusions about human papillomavirus-related malignancies. Head Neck. 2014 Jun; 2013 Sep 2. PMID: 23696473

May MT, Ingle SM, Costagliola D, Justice AC, de Wolf F, Cavassini M, D'Arminio Monforte A, Casabona J, Hogg RS, Mocroft A, Lampe FC, Dabis F, Fätkenheuer G, Sterling TR, del Amo J, Gill MJ, Crane HM, Saag MS, Guest J, Brodt HR, Sterne JA, Antiretroviral Cohort Collaboration.: Cohort profile: Antiretroviral Therapy Cohort Collaboration (ART-CC). Int J Epidemiol. 2014 Jun; 2013 Apr 18. PMID: 23599235

Womack JA, Brandt CA, Justice AC: Women, Aging, and HIV: Clinical Issues and Management Strategies. J Nurse Pract. 2014 Jun 1. PMID: 24932161

Chen MM, Roman SA, Kraus DH, Sosa JA, Judson BL: Transoral Robotic Surgery: A Population-Level Analysis. Otolaryngol Head Neck Surg. 2014 Jun; 2014 Mar 11. PMID: 24618503

Chaiyachati KH, Gordon K, Long T, Levin W, Khan A, Meyer E, Justice A, Brienza R: Continuity in a VA patient-centered medical home reduces emergency department visits. PLoS One. 2014; 2014 May 27. PMID: 24867300

Patel N, Khan AO, Mansour A, Mohamed JY, Al-Assiri A, Haddad R, Jia X, Xiong Y, Mégarbané A, Traboulsi EI, Alkuraya FS: Mutations in ASPH cause facial dysmorphism, lens dislocation, anterior-segment abnormalities, and spontaneous filtering blebs, or Traboulsi syndrome. Am J Hum Genet. 2014 May 1; 2014 Apr 24. PMID: 24768550

Cotmore SF, Agbandje-McKenna M, Chiorini JA, Mukha DV, Pintel DJ, Qiu J, Soderlund-Venermo M, Tattersall P, Tijssen P, Gatherer D, Davison AJ: The family Parvoviridae. Arch Virol. 2014 May; 2013 Nov 9. PMID: 24212889

Sewell A, Brown B, Biktasova A, Mills GB, Lu Y, Tyson DR, Issaeva N, Yarbrough WG: Reverse-phase protein array profiling of oropharyngeal cancer and significance of PIK3CA mutations in HPV-associated head and neck cancer. Clin Cancer Res. 2014 May 1; 2014 Mar 5. PMID: 24599934

Paglino JC, Andres W, van den Pol AN: Autonomous parvoviruses neither stimulate nor are inhibited by the type I interferon response in human normal or cancer cells. J Virol. 2014 May; 2014 Feb 19. PMID: 24554651

Iwasaki A, Pillai PS: Innate immunity to influenza virus infection. Nat Rev Immunol. 2014 May. PMID: 24762827

Cohen EB, Jun SJ, Bears Z, Barrera FN, Alonso M, Engelman DM, DiMaio D: Mapping the homodimer interface of an optimized, artificial, transmembrane protein activator of the human erythropoietin receptor. PLoS One. 2014; 2014 Apr 30. PMID: 24788775

Jia X, Weber E, Tokarev A, Lewinski M, Rizk M, Suarez M, Guatelli J, Xiong Y: Structural basis of HIV-1 Vpu-mediated BST2 antagonism via hijacking of the clathrin adaptor protein complex 1. Elife. 2014 Apr 29; 2014 Apr 29. PMID: 24843023

Campo M, Oursler KK, Huang L, Goetz MB, Rimland D, Hoo GS, Brown ST, Rodriguez-Barradas MC, Au D, Akgün KM, Shahrir S, Crothers K: Association of chronic cough and pulmonary function with 6-minute walk test performance in HIV infection. J Acquir Immune Defic Syndr. 2014 Apr 15. PMID: 24346638

Paintsil E, Binka M, Patel A, Lindenbach BD, Heimer R: Hepatitis C virus maintains infectivity for weeks after drying on inanimate surfaces at room temperature: implications for risks of transmission. J Infect Dis. 2014 Apr 15; 2013 Nov 23. PMID: 24273176

Goodwin EC, Motamedi N, Lipovsky A, Fernández-Busnadiego R, DiMaio D: Expression of DNAJB12 or DNAJB14 causes coordinate invasion of the nucleus by membranes associated with a novel nuclear pore structure. PLoS One. 2014; 2014 Apr 14. PMID: 24732912

Miller CJ, Baker JV, Bormann AM, Erlandson KM, Huppler Hullsiek K, Justice AC, Neuhaus J, Paredes R, Petoumenos K, Wentworth D, Winston A, Wolfson J, Neaton JD, INSIGHT SMART Study Group., ESPRIT Study Group.: Adjudicated morbidity and mortality outcomes by age among individuals with HIV infection on suppressive antiretroviral therapy. PLoS One. 2014; 2014 Apr 11. PMID: 24728071

Guo YE, Riley KJ, Iwasaki A, Steitz JA: Alternative capture of noncoding RNAs or protein-coding genes by herpesviruses to alter host T cell function. Mol Cell. 2014 Apr 10. PMID: 24725595

Park R, El-Guindy A, Heston L, Lin SF, Yu KP, Nagy M, Borah S, Delecluse HJ, Steitz J, Miller G: Nuclear translocation and regulation of intranuclear distribution of cytoplasmic poly(A)-binding protein are distinct processes mediated by two Epstein Barr virus proteins. PLoS One. 2014; 2014 Apr 4. PMID: 24705134

Honiden S, Akgün KM: At-risk drinking in the ICU... and beyond!*. Crit Care Med. 2014 Apr. PMID: 24633100

Rawling DC, Pyle AM: Parts, assembly and operation of the RIG-I family of motors. Curr Opin Struct Biol. 2014 Apr; 2013 Dec 20. PMID: 24878341

van den Pol AN, Ding S, Robek MD: Long-distance interferon signaling within the brain blocks virus spread. J Virol. 2014 Apr; 2014 Jan 15. PMID: 24429359

Fitzgerald ME, Vela A, Pyle AM: Dicer-related helicase 3 forms an obligate dimer for recognizing 22G-RNA. Nucleic Acids Res. 2014 Apr; 2014 Jan 15. PMID: 24435798

Cech TR, Steitz JA: The noncoding RNA revolution-trashing old rules to forge new ones. Cell. 2014 Mar 27. PMID: 24679528

Dimaio D: Is virology dead? MBio. 2014 Mar 25; 2014 Mar 25. PMID: 24667711

Brown ST, Tate JP, Kyriakides TC, Kirkwood KA, Holodniy M, Goulet JL, Angus BJ, Cameron DW, Justice AC, OPTIMA Team.: The VACS index accurately predicts mortality and treatment response among multi-drug resistant HIV infected patients participating in the options in management with antiretrovirals (OPTIMA) study. PLoS One. 2014; 2014 Mar 25. PMID: 24667813

Munro JB, Nath A, Färber M, Datta SA, Rein A, Rhoades E, Mothes W: A conformational transition observed in single HIV-1 Gag molecules during in vitro assembly of virus-like particles. J Virol. 2014 Mar; 2014 Jan 8. PMID: 24403576

Fribourgh JL, Nguyen HC, Wolfe LS, Dewitt DC, Zhang W, Yu XF, Rhoades E, Xiong Y: Core binding factor beta plays a critical role by facilitating the assembly of the Vif-cullin 5 E3 ubiquitin ligase. J Virol. 2014 Mar; 2014 Jan 3. PMID: 24390320

Chen MM, Roman SA, Sosa JA, Judson BL: Safety of adult tonsillectomy: a population-level analysis of 5968 patients. JAMA Otolaryngol Head Neck Surg. 2014 Mar. PMID: 24481159

Agosto LM, Zhong P, Munro J, Mothes W: Highly active antiretroviral therapies are effective against HIV-1 cell-to-cell transmission. PLoS Pathog. 2014 Feb; 2014 Feb 27. PMID: 24586176

Liu C, Xiong Y: Electron density sharpening as a general technique in crystallographic studies. J Mol Biol. 2014 Feb 20; 2013 Nov 21. PMID: 24269527

Thompson PD, Sakwe A, Koumangoye R, Yarbrough WG, Ochieng J, Marshall DR: Alpha-2 Heremans Schmid Glycoprotein (AHSG) modulates signaling pathways in head and neck squamous cell carcinoma cell line SQ20B. Exp Cell Res. 2014 Feb 15; 2013 Dec 12. PMID: 24332981

Bonham KS, Orzalli MH, Hayashi K, Wolf AI, Glanemann C, Weninger W, Iwasaki A, Knipe DM, Kagan JC: A promiscuous lipid-binding protein diversifies the subcellular sites of toll-like receptor signal transduction. Cell. 2014 Feb 13. PMID: 24529375

Kohler AC, Spanò S, Galán JE, Stebbins CE: Structural and enzymatic characterization of a host-specificity determinant from Salmonella. Acta Crystallogr D Biol Crystallogr. 2014 Feb; 2014 Jan 29. PMID: 24531472

Chen MM, Roman SA, Sosa JA, Judson BL: Histologic grade as prognostic indicator for mucoepidermoid carcinoma: a population-level analysis of 2400 patients. Head Neck. 2014 Feb; 2013 Jun 14. PMID: 23765800

Somarowthu S, Legiewicz M, Keating KS, Pyle AM: Visualizing the ai5γ group IIB intron. Nucleic Acids Res. 2014 Feb; 2013 Nov 6. PMID: 24203709

Halder S, Cotmore S, Heimburg-Molinaro J, Smith DF, Cummings RD, Chen X, Trollope AJ, North SJ, Haslam SM, Dell A, Tattersall P, McKenna R, Agbandje-McKenna M: Profiling of glycan receptors for minute virus of mice in permissive cell lines towards understanding the mechanism of cell recognition. PLoS One. 2014; 2014 Jan 27. PMID: 24475195

Degnan PH, Barry NA, Mok KC, Taga ME, Goodman AL: Human gut microbes use multiple transporters to distinguish vitamin B₁₂ analogs and compete in the gut. Cell Host Microbe. 2014 Jan 15. PMID: 24439897

Lefebre MD, Galán JE: The inner rod protein controls substrate switching and needle length in a Salmonella type III secretion system. Proc Natl Acad Sci U S A. 2014 Jan 14; 2013 Dec 30. PMID: 24379359

Chacón KM, Petti LM, Scheideman EH, Pirazzoli V, Politi K, DiMaio D: De novo selection of oncogenes. Proc Natl Acad Sci U S A. 2014 Jan 7; 2013 Dec 16. PMID: 24344264

Rose AE, Zhao C, Turner EM, Steyer AM, Schlieker C: Arresting a Torsin ATPase reshapes the endoplasmic reticulum. J Biol Chem. 2014 Jan 3; 2013 Nov 25. PMID: 24275647

Chabria SB, Gupta S, Kozal MJ: Deep sequencing of HIV: clinical and research applications. Annu Rev Genomics Hum Genet. 2014; 2014 May 9. PMID: 24821496

Galán JE, Lara-Tejero M, Marlovits TC, Wagner S: Bacterial type III secretion systems: specialized nanomachines for protein delivery into target cells. Annu Rev Microbiol. 2014; 2014 Jun 18. PMID: 25002086

DiMaio D: Viral miniproteins. Annu Rev Microbiol. 2014; 2014 Apr 10. PMID: 24742054

Lo MK, Bird BH, Chattopadhyay A, Drew CP, Martin BE, Coleman JD, Rose JK, Nichol ST, Spiropoulou CF: Single-dose replication-defective VSV-based Nipah virus vaccines provide protection from lethal challenge in Syrian hamsters. Antiviral Res. 2014 Jan; 2013 Oct 30. PMID: 24184127

Vilarinho S, Taddei TH: New frontier in liver cancer treatment: oncolytic viral therapy. Hepatology. 2014 Jan; 2013 Nov 15. PMID: 23836532

Kohlway A, Pirakitikulr N, Barrera FN, Potapova O, Engelman DM, Pyle AM, Lindenbach BD: Hepatitis C virus RNA replication and virus particle assembly require specific dimerization of the NS4A protein transmembrane domain. J Virol. 2014 Jan; 2013 Oct 30. PMID: 24173222

Beloor J, Nam HY, Lee SK, Kumar P: Arginine-grafted biodegradable polymer: a versatile transfection reagent for both DNA and siRNA. Methods Mol Biol. 2014. PMID: 25030923

Zhao Q, Saro D, Sachpatzidis A, Singh TR, Schlingman D, Zheng XF, Mack A, Tsai MS, Mochrie S, Regan L, Meetei AR, Sung P, Xiong Y: The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes. Nat Commun. 2014. PMID: 24390579

Ding S, Khoury-Hanold W, Iwasaki A, Robek MD: Epigenetic reprogramming of the type III interferon response potentiates antiviral activity and suppresses tumor growth. PLoS Biol. 2014 Jan; 2014 Jan 7. PMID: 24409098

Xie M, Steitz JA: Versatile microRNA biogenesis in animals and their viruses. RNA Biol. 2014; 2014 May 7. PMID: 24823351

Moss WN, Lee N, Pimienta G, Steitz JA: RNA families in Epstein-Barr virus. RNA Biol. 2014; 2013 Dec 20. PMID: 24441309

Xie M, Li M, Vilborg A, Lee N, Shu MD, Yartseva V, Šestan N, Steitz JA: Mammalian 5'-capped microRNA precursors that generate a single microRNA. Cell. 2013 Dec 19. PMID: 24360278

Samji H, Cescon A, Hogg RS, Modur SP, Althoff KN, Buchacz K, Burchell AN, Cohen M, Gebo KA, Gill MJ, Justice A, Kirk G, Klein MB, Korthuis PT, Martin J, Napravnik S, Rourke SB, Sterling TR, Silverberg MJ, Deeks S, Jacobson LP, Bosch RJ, Kitahata MM, Goedert JJ, Moore R, Gange SJ, North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD) of IeDEA.: Closing the gap: increases in life expectancy among treated HIV-positive individuals in the United States and Canada. PLoS One. 2013; 2013 Dec 18. PMID: 24367482

Gubanova E, Issaeva N, Gokturk C, Djureinovic T, Helleday T: SMG-1 suppresses CDK2 and tumor growth by regulating both the p53 and Cdc25A signaling pathways. Cell Cycle. 2013 Dec 15; 2013 Oct 4. PMID: 24107632

You F, Wang P, Yang L, Yang G, Zhao YO, Qian F, Walker W, Sutton R, Montgomery R, Lin R, Iwasaki A, Fikrig E: ELF4 is critical for induction of type I interferon and the host antiviral response. Nat Immunol. 2013 Dec; 2013 Nov 3. PMID: 24185615

Chen MM, Roman SA, Sosa JA, Judson BL: Postdischarge complications predict reoperation and mortality after otolaryngologic surgery. Otolaryngol Head Neck Surg. 2013 Dec; 2013 Sep 18. PMID: 24047818

Edelman EJ, Gordon KS, Lo Re V 3rd, Skanderson M, Fiellin DA, Justice AC, VACS Project Team.: Acetaminophen receipt among HIV-infected patients with advanced hepatic fibrosis. Pharmacoepidemiol Drug Saf. 2013 Dec; 2013 Sep 22. PMID: 24285468

Herbert KM, Pimienta G, DeGregorio SJ, Alexandrov A, Steitz JA: Phosphorylation of DGCR8 increases its intracellular stability and induces a progrowth miRNA profile. Cell Rep. 2013 Nov 27; 2013 Nov 14. PMID: 24239349

Pyle AM: Coordinating the party: assembly factors and ribogenesis. Mol Cell. 2013 Nov 21. PMID: 24267447

Schleifman EB, McNeer NA, Jackson A, Yamtich J, Brehm MA, Shultz LD, Greiner DL, Kumar P, Saltzman WM, Glazer PM: Site-specific Genome Editing in PBMCs With PLGA Nanoparticle-delivered PNAs Confers HIV-1 Resistance in Humanized Mice. Mol Ther Nucleic Acids. 2013 Nov 19; 2013 Nov 19. PMID: 24253260

Palm NW, Rosenstein RK, Yu S, Schenten DD, Florsheim E, Medzhitov R: Bee venom phospholipase A2 induces a primary type 2 response that is dependent on the receptor ST2 and confers protective immunity. Immunity. 2013 Nov 14; 2013 Oct 24. PMID: 24210353

Marcia M, Humphris-Narayanan E, Keating KS, Somarowthu S, Rajashankar K, Pyle AM: Solving nucleic acid structures by molecular replacement: examples from group II intron studies. Acta Crystallogr D Biol Crystallogr. 2013 Nov; 2013 Oct 12. PMID: 24189228

Ji X, Wu Y, Yan J, Mehrens J, Yang H, DeLucia M, Hao C, Gronenborn AM, Skowronski J, Ahn J, Xiong Y: Mechanism of allosteric activation of SAMHD1 by dGTP. Nat Struct Mol Biol. 2013 Nov; 2013 Oct 20. PMID: 24141705

Vollmers EM, Tattersall P: Distinct host cell fates for human malignant melanoma targeted by oncolytic rodent parvoviruses. Virology. 2013 Nov; 2013 Aug 9. PMID: 24074565

Kumamoto Y, Linehan M, Weinstein JS, Laidlaw BJ, Craft JE, Iwasaki A: CD301b⁺ dermal dendritic cells drive T helper 2 cell-mediated immunity. Immunity. 2013 Oct 17; 2013 Sep 26. PMID: 24076051

Barry O, Powell J, Renner L, Bonney EY, Prin M, Ampofo W, Kusah J, Goka B, Sagoe KW, Shabanova V, Paintsil E: Effectiveness of first-line antiretroviral therapy and correlates of longitudinal changes in CD4 and viral load among HIV-infected children in Ghana. BMC Infect Dis. 2013 Oct 13; 2013 Oct 13. PMID: 24119088

Bari K, Aslanian HR, Pollak J, Reiner E, Salem RR, Taddei TH, Emre SH, Jamidar PA: Emphysematous Cholecystitis Resulting in Secondary Biliary Cirrhosis: A Rare Complication of Endoscopic Retrograde Cholangiopancreatography. ACG Case Rep J. 2013 Oct; 2013 Oct 8. PMID: 26157820

Edwards AP, Xie Y, Bowers L, DiMaio D: Compensatory mutants of the bovine papillomavirus E5 protein and the platelet-derived growth factor β receptor reveal a complex direct transmembrane interaction. J Virol. 2013 Oct; 2013 Aug 7. PMID: 23926343

Lindenbach BD, Rice CM: The ins and outs of hepatitis C virus entry and assembly. Nat Rev Microbiol. 2013 Oct; 2013 Sep 10. PMID: 24018384

Spanò S, Galán JE: A novel anti-microbial function for a familiar Rab GTPase. Small GTPases. 2013 Oct-Dec; 2013 Dec 9. PMID: 24321888

Shin H, Iwasaki A: Generating protective immunity against genital herpes. Trends Immunol. 2013 Oct; 2013 Sep 3. PMID: 24012144

DiMaio D, Petti LM: The E5 proteins. Virology. 2013 Oct; 2013 May 31. PMID: 23731971

Pisani MA, Bramley K, Vest MT, Akgün KM, Araujo KL, Murphy TE: Patterns of opiate, benzodiazepine, and antipsychotic drug dosing in older patients in a medical intensive care unit. Am J Crit Care. 2013 Sep. PMID: 23996429

Shin H, Iwasaki A: Tissue-resident memory T cells. Immunol Rev. 2013 Sep. PMID: 23947354

Nagy V, Pirakitikulr N, Zhou KI, Chillón I, Luo J, Pyle AM: Predicted group II intron lineages E and F comprise catalytically active ribozymes. RNA. 2013 Sep; 2013 Jul 23. PMID: 23882113

Iijima N, Goodwin EC, Dimaio D, Iwasaki A: High-risk human papillomavirus E6 inhibits monocyte differentiation to Langerhans cells. Virology. 2013 Sep; 2013 Jul 18. PMID: 23871219

Garcia ML, Reynolds TD, Mothes W, Robek MD: Functional characterization of the putative hepatitis B virus core protein late domain using retrovirus chimeras. PLoS One. 2013; 2013 Aug 29. PMID: 24009707

Pang IK, Pillai PS, Iwasaki A: Efficient influenza A virus replication in the respiratory tract requires signals from TLR7 and RIG-I. Proc Natl Acad Sci U S A. 2013 Aug 20; 2013 Aug 5. PMID: 23918369

Moss WN, Steitz JA: Genome-wide analyses of Epstein-Barr virus reveal conserved RNA structures and a novel stable intronic sequence RNA. BMC Genomics. 2013 Aug 9; 2013 Aug 9. PMID: 23937650

Edelman EJ, Gordon KS, Glover J, McNicholl IR, Fiellin DA, Justice AC: The next therapeutic challenge in HIV: polypharmacy. Drugs Aging. 2013 Aug. PMID: 23740523

Mattei LM, Cotmore SF, Tattersall P, Iwasaki A: Parvovirus evades interferon-dependent viral control in primary mouse embryonic fibroblasts. Virology. 2013 Jul 20; 2013 May 12. PMID: 23676303

Song J, Gao X, Galán JE: Structure and function of the Salmonella Typhi chimaeric A(2)B(5) typhoid toxin. Nature. 2013 Jul 18; 2013 Jul 10. PMID: 23842500

Augagneur Y, Jaubert L, Schiavoni M, Pachikara N, Garg A, Usmani-Brown S, Wesolowski D, Zeller S, Ghosal A, Cornillot E, Said HM, Kumar P, Altman S, Ben Mamoun C: Identification and functional analysis of the primary pantothenate transporter, PfPAT, of the human malaria parasite Plasmodium falciparum. J Biol Chem. 2013 Jul 12; 2013 May 31. PMID: 23729665

Taddei TH: A multidisciplinary approach: group dynamics. J Clin Gastroenterol. 2013 Jul. PMID: 23632364

Huang F, Hartwich TM, Rivera-Molina FE, Lin Y, Duim WC, Long JJ, Uchil PD, Myers JR, Baird MA, Mothes W, Davidson MW, Toomre D, Bewersdorf J: Video-rate nanoscopy using sCMOS camera-specific single-molecule localization algorithms. Nat Methods. 2013 Jul; 2013 May 26. PMID: 23708387

Akgün KM, Tate JP, Pisani M, Fried T, Butt AA, Gibert CL, Huang L, Rodriguez-Barradas MC, Rimland D, Justice AC, Crothers K: Medical ICU admission diagnoses and outcomes in human immunodeficiency virus-infected and virus-uninfected veterans in the combination antiretroviral era. Crit Care Med. 2013 Jun. PMID: 23507717

Johung K, Rewari A, Wu H, Judson B, Contessa JN, Haffty BG, Decker RH: Role of excision repair cross-complementation 1 expression as a prognostic marker for response to radiotherapy in early-stage laryngeal cancer. Head Neck. 2013 Jun; 2012 Jun 28. PMID: 22740347

Li F, Jin J, Herrmann C, Mothes W: Basic residues in the matrix domain and multimerization target murine leukemia virus Gag to the virological synapse. J Virol. 2013 Jun; 2013 Apr 24. PMID: 23616653

Wollmann G, Davis JN, Bosenberg MW, van den Pol AN: Vesicular stomatitis virus variants selectively infect and kill human melanomas but not normal melanocytes. J Virol. 2013 Jun; 2013 Apr 3. PMID: 23552414

Licona-Limón P, Kim LK, Palm NW, Flavell RA: TH2, allergy and group 2 innate lymphoid cells. Nat Immunol. 2013 Jun. PMID: 23685824

Womack JA, Goulet JL, Gibert C, Brandt CA, Skanderson M, Gulanski B, Rimland D, Rodriguez-Barradas MC, Tate J, Yin MT, Justice AC, Veterans Aging Cohort Study Project Team.: Physiologic frailty and fragility fracture in HIV-infected male veterans. Clin Infect Dis. 2013 May; 2013 Feb 1. PMID: 23378285

Fiellin DA, McGinnis KA, Maisto SA, Justice AC, Bryant K: Measuring alcohol consumption using Timeline Followback in non-treatment-seeking medical clinic patients with and without HIV infection: 7-, 14-, or 30-day recall. J Stud Alcohol Drugs. 2013 May. PMID: 23490581

Feinstein AJ, Ciarleglio MM, Cong X, Otremba MD, Judson BL: Parotid gland lymphoma: prognostic analysis of 2140 patients. Laryngoscope. 2013 May; 2013 Apr 10. PMID: 23576299

Marcia M, Somarowthu S, Pyle AM: Now on display: a gallery of group II intron structures at different stages of catalysis. Mob DNA. 2013 May 1; 2013 May 1. PMID: 23634971

Hicks SW, Galán JE: Exploitation of eukaryotic subcellular targeting mechanisms by bacterial effectors. Nat Rev Microbiol. 2013 May. PMID: 23588250

Lipovsky A, Popa A, Pimienta G, Wyler M, Bhan A, Kuruvilla L, Guie MA, Poffenberger AC, Nelson CD, Atwood WJ, DiMaio D: Genome-wide siRNA screen identifies the retromer as a cellular entry factor for human papillomavirus. Proc Natl Acad Sci U S A. 2013 Apr 30; 2013 Apr 8. PMID: 23569269

Wang P, Yang L, Cheng G, Yang G, Xu Z, You F, Sun Q, Lin R, Fikrig E, Sutton RE: UBXN1 interferes with Rig-I-like receptor-mediated antiviral immune response by targeting MAVS. Cell Rep. 2013 Apr 25; 2013 Mar 28. PMID: 23545497

Zhao C, Brown RS, Chase AR, Eisele MR, Schlieker C: Regulation of Torsin ATPases by LAP1 and LULL1. Proc Natl Acad Sci U S A. 2013 Apr 23; 2013 Apr 8. PMID: 23569223

Zhang X, van den Pol AN: Direct inhibition of arcuate proopiomelanocortin neurons: a potential mechanism for the orexigenic actions of dynorphin. J Physiol. 2013 Apr 1; 2013 Jan 14. PMID: 23318874

Chen X, Taylor DW, Fowler CC, Galan JE, Wang HW, Wolin SL: An RNA degradation machine sculpted by Ro autoantigen and noncoding RNA. Cell. 2013 Mar 28. PMID: 23540697

Selvaraj S, Paintsil E: Virologic and host risk factors for mother-to-child transmission of HIV. Curr HIV Res. 2013 Mar. PMID: 23432486

Leder SB, Judson BL, Sliwinski E, Madson L: Promoting safe swallowing when puree is swallowed without aspiration but thin liquid is aspirated: nectar is enough. Dysphagia. 2013 Mar; 2012 Jun 27. PMID: 22736260

Tetrault JM, Kozal MJ, Chiarella J, Sullivan LE, Dinh AT, Fiellin DA: Association between risk behaviors and antiretroviral resistance in HIV-infected patients receiving opioid agonist treatment. J Addict Med. 2013 Mar-Apr. PMID: 23388678

Li Y, Xu Y, van den Pol AN: Reversed synaptic effects of hypocretin and NPY mediated by excitatory GABA-dependent synaptic activity in developing MCH neurons. J Neurophysiol. 2013 Mar; 2012 Dec 19. PMID: 23255725

Mattei LM, Cotmore SF, Li L, Tattersall P, Iwasaki A: Toll-like receptor 9 in plasmacytoid dendritic cells fails to detect parvoviruses. J Virol. 2013 Mar; 2013 Jan 9. PMID: 23302877

Goulet JL, Brandt C, Crystal S, Fiellin DA, Gibert C, Gordon AJ, Kerns RD, Maisto S, Justice AC: Agreement between electronic medical record-based and self-administered pain numeric rating scale: clinical and research implications. Med Care. 2013 Mar. PMID: 23222528

Pang IK, Ichinohe T, Iwasaki A: IL-1R signaling in dendritic cells replaces pattern-recognition receptors in promoting CD8⁺ T cell responses to influenza A virus. Nat Immunol. 2013 Mar; 2013 Jan 13. PMID: 23314004

Tate JP, Justice AC, Hughes MD, Bonnet F, Reiss P, Mocroft A, Nattermann J, Lampe FC, Bucher HC, Sterling TR, Crane HM, Kitahata MM, May M, Sterne JA: An internationally generalizable risk index for mortality after one year of antiretroviral therapy. AIDS. 2013 Feb 20. PMID: 23095314

Hayashi K, Iwasaki A: Different routes to the same destination. Elife. 2013 Feb 19; 2013 Feb 19. PMID: 23426937

Yordy B, Iwasaki A: Cell type-dependent requirement of autophagy in HSV-1 antiviral defense. Autophagy. 2013 Feb 1; 2012 Oct 24. PMID: 23095715

Cotmore SF, Tattersall P: Parvovirus diversity and DNA damage responses. Cold Spring Harb Perspect Biol. 2013 Feb 1; 2013 Feb 1. PMID: 23293137

Paintsil E: Update on recent guidelines for the management of urinary tract infections in children: the shifting paradigm. Curr Opin Pediatr. 2013 Feb. PMID: 23241875

Zhong P, Agosto LM, Munro JB, Mothes W: Cell-to-cell transmission of viruses. Curr Opin Virol. 2013 Feb; 2012 Dec 5. PMID: 23219376

Justice AC, Modur SP, Tate JP, Althoff KN, Jacobson LP, Gebo KA, Kitahata MM, Horberg MA, Brooks JT, Buchacz K, Rourke SB, Rachlis A, Napravnik S, Eron J, Willig JH, Moore R, Kirk GD, Bosch R, Rodriguez B, Hogg RS, Thorne J, Goedert JJ, Klein M, Gill J, Deeks S, Sterling TR, Anastos K, Gange SJ, NA-ACCORD and VACS Project Teams.: Predictive accuracy of the Veterans Aging Cohort Study index for mortality with HIV infection: a North American cross cohort analysis. J Acquir Immune Defic Syndr. 2013 Feb 1. PMID: 23187941

Palm NW, Medzhitov R: Role of the inflammasome in defense against venoms. Proc Natl Acad Sci U S A. 2013 Jan 29; 2013 Jan 7. PMID: 23297192

van den Pol AN: Polio, still lurking in the shadows. J Neurosci. 2013 Jan 16. PMID: 23325224

Langs-Barlow A, Renner L, Katz K, Northrup V, Paintsil E: Performance of Clinical Criteria for Screening of Possible Antiretroviral Related Mitochondrial Toxicity in HIV-Infected Children in Accra. AIDS Res Treat. 2013; 2013 Mar 7. PMID: 23533730

Mistry PK, Taddei T, vom Dahl S, Rosenbloom BE: Gaucher disease and malignancy: a model for cancer pathogenesis in an inborn error of metabolism. Crit Rev Oncog. 2013. PMID: 23510066

Lindenbach BD: Virion assembly and release. Curr Top Microbiol Immunol. 2013. PMID: 23463202

Hodak H, Galán JE: A Salmonella Typhi homologue of bacteriophage muramidases controls typhoid toxin secretion. EMBO Rep. 2013 Jan; 2012 Nov 23. PMID: 23174673

Yordy B, Tal MC, Hayashi K, Arojo O, Iwasaki A: Autophagy and selective deployment of Atg proteins in antiviral defense. Int Immunol. 2013 Jan; 2012 Oct 5. PMID: 23042773

Akgün KM, Gordon K, Pisani M, Fried T, McGinnis KA, Tate JP, Butt AA, Gibert CL, Huang L, Rodriguez-Barradas MC, Rimland D, Justice AC, Crothers K: Risk factors for hospitalization and medical intensive care unit (MICU) admission among HIV-infected Veterans. J Acquir Immune Defic Syndr. 2013 Jan 1. PMID: 23111572

Edelman EJ, Gordon K, Becker WC, Goulet JL, Skanderson M, Gaither JR, Brennan Braden J, Gordon AJ, Kerns RD, Justice AC, Fiellin DA: Receipt of opioid analgesics by HIV-infected and uninfected patients. J Gen Intern Med. 2013 Jan; 2012 Aug 16. PMID: 22895747

van den Pol AN, Davis JN: Highly attenuated recombinant vesicular stomatitis virus VSV-12'GFP displays immunogenic and oncolytic activity. J Virol. 2013 Jan; 2012 Nov 7. PMID: 23135719

Chattopadhyay A, Wang E, Seymour R, Weaver SC, Rose JK: A chimeric vesiculo/alphavirus is an effective alphavirus vaccine. J Virol. 2013 Jan; 2012 Oct 17. PMID: 23077320

Uchil PD, Hinz A, Siegel S, Coenen-Stass A, Pertel T, Luban J, Mothes W: TRIM protein-mediated regulation of inflammatory and innate immune signaling and its association with antiretroviral activity. J Virol. 2013 Jan; 2012 Oct 17. PMID: 23077300

El-Guindy A, Ghiassi-Nejad M, Golden S, Delecluse HJ, Miller G: Essential role of Rta in lytic DNA replication of Epstein-Barr virus. J Virol. 2013 Jan; 2012 Oct 17. PMID: 23077295

Carleton HA, Lara-Tejero M, Liu X, Galán JE: Engineering the type III secretion system in non-replicating bacterial minicells for antigen delivery. Nat Commun. 2013. PMID: 23481398

Zhong P, Agosto LM, Ilinskaya A, Dorjbal B, Truong R, Derse D, Uchil PD, Heidecker G, Mothes W: Cell-to-cell transmission can overcome multiple donor and target cell barriers imposed on cell-free HIV. PLoS One. 2013; 2013 Jan 7. PMID: 23308151

Hannemann S, Gao B, Galán JE: Salmonella modulation of host cell gene expression promotes its intracellular growth. PLoS Pathog. 2013; 2013 Oct 3. PMID: 24098123

Luo D, Kohlway A, Pyle AM: Duplex RNA activated ATPases (DRAs): platforms for RNA sensing, signaling and processing. RNA Biol. 2013 Jan; 2012 Dec 10. PMID: 23228901

Alexandrov A, Colognori D, Shu MD, Steitz JA: Human spliceosomal protein CWC22 plays a role in coupling splicing to exon junction complex deposition and nonsense-mediated decay. Proc Natl Acad Sci U S A. 2012 Dec 26; 2012 Dec 10. PMID: 23236153

Henault J, Martinez J, Riggs JM, Tian J, Mehta P, Clarke L, Sasai M, Latz E, Brinkmann MM, Iwasaki A, Coyle AJ, Kolbeck R, Green DR, Sanjuan MA: Noncanonical autophagy is required for type I interferon secretion in response to DNA-immune complexes. Immunity. 2012 Dec 14; 2012 Dec 6. PMID: 23219390

Vela A, Fedorova O, Ding SC, Pyle AM: The thermodynamic basis for viral RNA detection by the RIG-I innate immune sensor. J Biol Chem. 2012 Dec 14; 2012 Oct 10. PMID: 23055530

Blumberg JM, Jedrych J, Costa J, Judson B: Cervical dedifferentiated liposarcoma with meningothelial-like whorling. Head Neck Pathol. 2012 Dec; 2012 Apr 21. PMID: 22528826

Judson BL, Adam SI, Lowlicht R, Bulsara KR: Transcervical double mandibular osteotomy approach to the infratemporal fossa. World Neurosurg. 2012 Dec; 2011 Dec 13. PMID: 22381299

Brown JA, Valenstein ML, Yario TA, Tycowski KT, Steitz JA: Formation of triple-helical structures by the 3'-end sequences of MALAT1 and MENβ noncoding RNAs. Proc Natl Acad Sci U S A. 2012 Nov 20; 2012 Nov 5. PMID: 23129630

Spanò S, Galán JE: A Rab32-dependent pathway contributes to Salmonella typhi host restriction. Science. 2012 Nov 16. PMID: 23162001

Shin H, Iwasaki A: A vaccine strategy that protects against genital herpes by establishing local memory T cells. Nature. 2012 Nov 15; 2012 Oct 17. PMID: 23075848

Luo D, Kohlway A, Vela A, Pyle AM: Visualizing the determinants of viral RNA recognition by innate immune sensor RIG-I. Structure. 2012 Nov 7; 2012 Sep 27. PMID: 23022350

Yang H, Ji X, Zhao G, Ning J, Zhao Q, Aiken C, Gronenborn AM, Zhang P, Xiong Y: Structural insight into HIV-1 capsid recognition by rhesus TRIM5α. Proc Natl Acad Sci U S A. 2012 Nov 6; 2012 Oct 22. PMID: 23091002

Elinav H, Wu Y, Coskun A, Hryckiewicz K, Kemler I, Hu Y, Rogers H, Hao B, Ben Mamoun C, Poeschla E, Sutton R: Human CRM1 augments production of infectious human and feline immunodeficiency viruses from murine cells. J Virol. 2012 Nov; 2012 Aug 29. PMID: 22933280

Li L, Cotmore SF, Tattersall P: Maintenance of the flip sequence orientation of the ears in the parvoviral left-end hairpin is a nonessential consequence of the critical asymmetry in the hairpin stem. J Virol. 2012 Nov; 2012 Aug 29. PMID: 22933276

Lee N, Pimienta G, Steitz JA: AUF1/hnRNP D is a novel protein partner of the EBER1 noncoding RNA of Epstein-Barr virus. RNA. 2012 Nov; 2012 Sep 25. PMID: 23012480

Marcia M, Pyle AM: Visualizing group II intron catalysis through the stages of splicing. Cell. 2012 Oct 26. PMID: 23101623

van den Pol AN: Neuropeptide transmission in brain circuits. Neuron. 2012 Oct 4. PMID: 23040809

Lloyd S, Yu JB, Wilson LD, Judson BL, Decker RH: The prognostic importance of midline involvement in oral tongue cancer. Am J Clin Oncol. 2012 Oct. PMID: 21701377

Scheideman EH, Marlatt SA, Xie Y, Hu Y, Sutton RE, DiMaio D: Transmembrane protein aptamers that inhibit CCR5 expression and HIV coreceptor function. J Virol. 2012 Oct; 2012 Jul 18. PMID: 22811524

Rose A, Schlieker C: Alternative nuclear transport for cellular protein quality control. Trends Cell Biol. 2012 Oct; 2012 Jul 31. PMID: 22858153

Iwasaki A: Innate immune recognition of HIV-1. Immunity. 2012 Sep 21. PMID: 22999945

Fedorova O, Pyle AM: The brace for a growing scaffold: Mss116 protein promotes RNA folding by stabilizing an early assembly intermediate. J Mol Biol. 2012 Sep 21; 2012 Jun 13. PMID: 22705286

Yordy B, Iijima N, Huttner A, Leib D, Iwasaki A: A neuron-specific role for autophagy in antiviral defense against herpes simplex virus. Cell Host Microbe. 2012 Sep 13. PMID: 22980330

Judson BL, Prasad M, Zebardast N: Pathology quiz case 1. Ceruminous gland adenocarcinoma. Arch Otolaryngol Head Neck Surg. 2012 Sep. PMID: 22986727

Shin H, Iwasaki A: Skin T(RM) mediates distributed border patrol. Cell Res. 2012 Sep; 2012 May 8. PMID: 22565287

Dubrow R, Silverberg MJ, Park LS, Crothers K, Justice AC: HIV infection, aging, and immune function: implications for cancer risk and prevention. Curr Opin Oncol. 2012 Sep. PMID: 22759737

Humphris-Narayanan E, Pyle AM: Discrete RNA libraries from pseudo-torsional space. J Mol Biol. 2012 Aug 3; 2012 Mar 13. PMID: 22425640

Keating KS, Pyle AM: RCrane: semi-automated RNA model building. Acta Crystallogr D Biol Crystallogr. 2012 Aug; 2012 Jul 17. PMID: 22868764

Kumamoto Y, Iwasaki A: Unique features of antiviral immune system of the vaginal mucosa. Curr Opin Immunol. 2012 Aug; 2012 Jun 4. PMID: 22673876

Borah S, Nichols LA, Hassman LM, Kedes DH, Steitz JA: Tracking expression and subcellular localization of RNA and protein species using high-throughput single cell imaging flow cytometry. RNA. 2012 Aug; 2012 Jun 28. PMID: 22745225

Justice AC, Braithwaite RS: Lessons learned from the first wave of aging with HIV. AIDS. 2012 Jul 31. PMID: 22781174

Tycowski KT, Shu MD, Borah S, Shi M, Steitz JA: Conservation of a triple-helix-forming RNA stability element in noncoding and genomic RNAs of diverse viruses. Cell Rep. 2012 Jul 26; 2012 Jul 5. PMID: 22840393

Paglino JC, Ozduman K, van den Pol AN: LuIII parvovirus selectively and efficiently targets, replicates in, and kills human glioma cells. J Virol. 2012 Jul; 2012 May 2. PMID: 22553327

Magaldi TG, Buch MH, Murata H, Erickson KD, Neu U, Garcea RL, Peden K, Stehle T, DiMaio D: Mutations in the GM1 binding site of simian virus 40 VP1 alter receptor usage and cell tropism. J Virol. 2012 Jul; 2012 Apr 18. PMID: 22514351

Jia X, Singh R, Homann S, Yang H, Guatelli J, Xiong Y: Structural basis of evasion of cellular adaptive immunity by HIV-1 Nef. Nat Struct Mol Biol. 2012 Jun 17; 2012 Jun 17. PMID: 22705789

DiMaio D: Viruses, masters at downsizing. Cell Host Microbe. 2012 Jun 14. PMID: 22704616

Schell JB, Bahl K, Rose NF, Buonocore L, Hunter M, Marx PA, LaBranche CC, Montefiori DC, Rose JK: Viral vectored granulocyte-macrophage colony stimulating factor inhibits vaccine protection in an SIV challenge model: protection correlates with neutralizing antibody. Vaccine. 2012 Jun 13; 2012 Apr 23. PMID: 22537983

Edelman EJ, Gordon K, Rodriguez-Barradas MC, Justice AC, Vacs Project Team.: Patient-reported symptoms on the antiretroviral regimen efavirenz/emtricitabine/tenofovir. AIDS Patient Care STDS. 2012 Jun; 2012 May 21. PMID: 22612469

Leder SB, Suiter DM, Duffey D, Judson BL: Vocal fold immobility and aspiration status: a direct replication study. Dysphagia. 2012 Jun; 2011 Aug 21. PMID: 21858715

Riley KJ, Rabinowitz GS, Yario TA, Luna JM, Darnell RB, Steitz JA: EBV and human microRNAs co-target oncogenic and apoptotic viral and human genes during latency. EMBO J. 2012 May 2; 2012 Mar 30. PMID: 22473208

Kozal MJ, Lupo S, DeJesus E, Molina JM, McDonald C, Raffi F, Benetucci J, Mancini M, Yang R, Wirtz V, Percival L, Zhang J, Zhu L, Arikan D, Farajallah A, Nguyen BY, Leavitt R, McGrath D, Lataillade M, The Spartan Study Team: A nucleoside- and ritonavir-sparing regimen containing atazanavir plus raltegravir in antiretroviral treatment-naïve HIV-infected patients: SPARTAN study results. HIV Clin Trials. 2012 May-Jun. PMID: 22592092

Palm NW, Rosenstein RK, Medzhitov R: Allergic host defences. Nature. 2012 Apr 25; 2012 Apr 25. PMID: 22538607

Yao Y, Fu LY, Zhang X, van den Pol AN: Vasopressin and oxytocin excite MCH neurons, but not other lateral hypothalamic GABA neurons. Am J Physiol Regul Integr Comp Physiol. 2012 Apr; 2012 Jan 18. PMID: 22262306

Akgün KM, Crothers K, Pisani M: Epidemiology and management of common pulmonary diseases in older persons. J Gerontol A Biol Sci Med Sci. 2012 Mar; 2012 Feb 15. PMID: 22337938

Nag A, Steitz JA: Tri-snRNP-associated proteins interact with subunits of the TRAMP and nuclear exosome complexes, linking RNA decay and pre-mRNA splicing. RNA Biol. 2012 Mar; 2012 Mar 1. PMID: 22336707

Zhang X, van den Pol AN: Thyrotropin-releasing hormone (TRH) inhibits melanin-concentrating hormone neurons: implications for TRH-mediated anorexic and arousal actions. J Neurosci. 2012 Feb 29. PMID: 22378876

Kim J, Roberts A, Yuan H, Xiong Y, Anderson KS: Nucleocapsid protein annealing of a primer-template enhances (+)-strand DNA synthesis and fidelity by HIV-1 reverse transcriptase. J Mol Biol. 2012 Feb 3; 2011 Dec 23. PMID: 22210155

Tetrault JM, Tate JP, McGinnis KA, Goulet JL, Sullivan LE, Bryant K, Justice AC, Fiellin DA, Veterans Aging Cohort Study Team.: Hepatic safety and antiretroviral effectiveness in HIV-infected patients receiving naltrexone. Alcohol Clin Exp Res. 2012 Feb; 2011 Jul 28. PMID: 21797892

Magaldi TG, Almstead LL, Bellone S, Prevatt EG, Santin AD, DiMaio D: Primary human cervical carcinoma cells require human papillomavirus E6 and E7 expression for ongoing proliferation. Virology. 2012 Jan 5; 2011 Nov 5. PMID: 22056390

Iwasaki A: A virological view of innate immune recognition. Annu Rev Microbiol. 2012. PMID: 22994491

Gilbert JW, Kalra VB, Judson BL, Malhotra A: Radiology quiz case 2. Giant cell granuloma (GCG) of the maxilla. Arch Otolaryngol Head Neck Surg. 2012 Jan. PMID: 22249638

Wollmann G, Ozduman K, van den Pol AN: Oncolytic virus therapy for glioblastoma multiforme: concepts and candidates. Cancer J. 2012 Jan-Feb. PMID: 22290260

Pang IK, Iwasaki A: Control of antiviral immunity by pattern recognition and the microbiome. Immunol Rev. 2012 Jan. PMID: 22168422

Cotmore SF, Tattersall P: Mutations at the base of the icosahedral five-fold cylinders of minute virus of mice induce 3'-to-5' genome uncoating and critically impair entry functions. J Virol. 2012 Jan; 2011 Oct 19. PMID: 22013064

Sewald X, Gonzalez DG, Haberman AM, Mothes W: In vivo imaging of virological synapses. Nat Commun. 2012. PMID: 23271654

Hoshi N, Schenten D, Nish SA, Walther Z, Gagliani N, Flavell RA, Reizis B, Shen Z, Fox JG, Iwasaki A, Medzhitov R: MyD88 signalling in colonic mononuclear phagocytes drives colitis in IL-10-deficient mice. Nat Commun. 2012. PMID: 23047678

Liu X, Gao B, Novik V, Galán JE: Quantitative Proteomics of Intracellular Campylobacter jejuni Reveals Metabolic Reprogramming. PLoS Pathog. 2012; 2012 Mar 8. PMID: 22412372

Park LS, Tate JP, Justice AC, Lo Re V 3rd, Lim JK, Bräu N, Brown ST, Butt AA, Gibert C, Goetz MB, Rimland D, Rodriguez-Barradas MC, Dubrow R: FIB-4 index is associated with hepatocellular carcinoma risk in HIV-infected patients. Cancer Epidemiol Biomarkers Prev. 2011 Dec; 2011 Oct 25. PMID: 22028407

Goodman AL, Wu M, Gordon JI: Identifying microbial fitness determinants by insertion sequencing using genome-wide transposon mutant libraries. Nat Protoc. 2011 Nov 17; 2011 Nov 17. PMID: 22094732

Spanò S, Liu X, Galán JE: Proteolytic targeting of Rab29 by an effector protein distinguishes the intracellular compartments of human-adapted and broad-host Salmonella. Proc Natl Acad Sci U S A. 2011 Nov 8; 2011 Oct 31. PMID: 22042847

Keating KS, Humphris EL, Pyle AM: A new way to see RNA. Q Rev Biophys. 2011 Nov; 2011 May 18. PMID: 21729350

Wright EJ, Chernichenko N, Ocal E, Moliterno J, Bulsara KR, Judson BL: Benign inverted papilloma with intracranial extension: prognostic factors and outcomes. Skull Base Rep. 2011 Nov; 2011 Sep 29. PMID: 23984218

Luo D, Ding SC, Vela A, Kohlway A, Lindenbach BD, Pyle AM: Structural insights into RNA recognition by RIG-I. Cell. 2011 Oct 14. PMID: 22000018

Pyle AM: RNA helicases and remodeling proteins. Curr Opin Chem Biol. 2011 Oct; 2011 Aug 20. PMID: 21862383

Counihan NA, Rawlinson SM, Lindenbach BD: Trafficking of hepatitis C virus core protein during virus particle assembly. PLoS Pathog. 2011 Oct; 2011 Oct 20. PMID: 22028650

Borah S, Darricarrère N, Darnell A, Myoung J, Steitz JA: A viral nuclear noncoding RNA binds re-localized poly(A) binding protein and is required for late KSHV gene expression. PLoS Pathog. 2011 Oct; 2011 Oct 13. PMID: 22022268

Schleifman EB, Bindra R, Leif J, del Campo J, Rogers FA, Uchil P, Kutsch O, Shultz LD, Kumar P, Greiner DL, Glazer PM: Targeted disruption of the CCR5 gene in human hematopoietic stem cells stimulated by peptide nucleic acids. Chem Biol. 2011 Sep 23. PMID: 21944757

Iwasaki A, Medzhitov R: A new shield for a cytokine storm. Cell. 2011 Sep 16. PMID: 21925310

Cazalla D, Xie M, Steitz JA: A primate herpesvirus uses the integrator complex to generate viral microRNAs. Mol Cell. 2011 Sep 16. PMID: 21925386

Yordy B, Iwasaki A: Autophagy in the control and pathogenesis of viral infection. Curr Opin Virol. 2011 Sep. PMID: 21927636

Sullivan LE, Goulet JL, Justice AC, Fiellin DA: Alcohol consumption and depressive symptoms over time: a longitudinal study of patients with and without HIV infection. Drug Alcohol Depend. 2011 Sep 1; 2011 Feb 22. PMID: 21345624

Tal MC, Iwasaki A: Mitoxosome: a mitochondrial platform for cross-talk between cellular stress and antiviral signaling. Immunol Rev. 2011 Sep. PMID: 21884179

Garla V, Lo Re V 3rd, Dorey-Stein Z, Kidwai F, Scotch M, Womack J, Justice A, Brandt C: The Yale cTAKES extensions for document classification: architecture and application. J Am Med Inform Assoc. 2011 Sep-Oct; 2011 May 27. PMID: 21622934

Wang EA, McGinnis KA, Fiellin DA, Goulet JL, Bryant K, Gibert CL, Leaf DA, Mattocks K, Sullivan LE, Vogenthaler N, Justice AC, VACS Project Team.: Food insecurity is associated with poor virologic response among HIV-infected patients receiving antiretroviral medications. J Gen Intern Med. 2011 Sep; 2011 May 15. PMID: 21573882

Huang H, Xu Y, van den Pol AN: Nicotine excites hypothalamic arcuate anorexigenic proopiomelanocortin neurons and orexigenic neuropeptide Y neurons: similarities and differences. J Neurophysiol. 2011 Sep; 2011 Jun 8. PMID: 21653710

Paglino JC, van den Pol AN: Vesicular stomatitis virus has extensive oncolytic activity against human sarcomas: rare resistance is overcome by blocking interferon pathways. J Virol. 2011 Sep; 2011 Jul 6. PMID: 21734048

Button JE, Galán JE: Regulation of chaperone/effector complex synthesis in a bacterial type III secretion system. Mol Microbiol. 2011 Sep; 2011 Aug 4. PMID: 21801239

Zeller SJ, Kumar P: RNA-based gene therapy for the treatment and prevention of HIV: from bench to bedside. Yale J Biol Med. 2011 Sep. PMID: 21966049

Zhang W, Tan S, Paintsil E, Dutschman GE, Gullen EA, Chu E, Cheng YC: Analysis of deoxyribonucleotide pools in human cancer cell lines using a liquid chromatography coupled with tandem mass spectrometry technique. Biochem Pharmacol. 2011 Aug 15; 2011 May 18. PMID: 21620803

Martinez I, Dimaio D: B-Myb, cancer, senescence, and microRNAs. Cancer Res. 2011 Aug 15; 2011 Aug 9. PMID: 21828240

Mukherjee S, Liu X, Arasaki K, McDonough J, Galán JE, Roy CR: Modulation of Rab GTPase function by a protein phosphocholine transferase. Nature. 2011 Aug 7; 2011 Aug 7. PMID: 21822290

Kallem S, Renner L, Ghebremichael M, Paintsil E: Prevalence and pattern of disclosure of HIV status in HIV-infected children in Ghana. AIDS Behav. 2011 Aug. PMID: 20607381

Jin J, Li F, Mothes W: Viral determinants of polarized assembly for the murine leukemia virus. J Virol. 2011 Aug; 2011 May 18. PMID: 21593177

Sasai M, Iwasaki A: Love triangle between Unc93B1, TLR7, and TLR9 prevents fatal attraction. Immunity. 2011 Jul 22. PMID: 21777792

Hicks SW, Charron G, Hang HC, Galán JE: Subcellular targeting of Salmonella virulence proteins by host-mediated S-palmitoylation. Cell Host Microbe. 2011 Jul 21. PMID: 21767808

Paglino J, Tattersall P: The parvoviral capsid controls an intracellular phase of infection essential for efficient killing of stepwise-transformed human fibroblasts. Virology. 2011 Jul 20; 2011 May 20. PMID: 21600623

Sahakian AB, Krishnamoorthy S, Taddei TH: Necrotizing pancreatitis complicated by fistula and upper gastrointestinal hemorrhage. Clin Gastroenterol Hepatol. 2011 Jul; 2011 Feb 4. PMID: 21296188

Kulkarni S, Taddei TH: When should a hepatitis C-positive ESRD patient receive a renal transplant? Semin Dial. 2011 Jul-Aug; 2011 Jul 29. PMID: 21801216

Goodwin EC, Lipovsky A, Inoue T, Magaldi TG, Edwards AP, Van Goor KE, Paton AW, Paton JC, Atwood WJ, Tsai B, DiMaio D: BiP and multiple DNAJ molecular chaperones in the endoplasmic reticulum are required for efficient simian virus 40 infection. MBio. 2011; 2011 Jun 14. PMID: 21673190

Cao W, Coman MM, Ding S, Henn A, Middleton ER, Bradley MJ, Rhoades E, Hackney DD, Pyle AM, De La Cruz EM: Mechanism of Mss116 ATPase reveals functional diversity of DEAD-Box proteins. J Mol Biol. 2011 Jun 10; 2011 Apr 9. PMID: 21501623

Schell JB, Rose NF, Bahl K, Diller K, Buonocore L, Hunter M, Marx PA, Gambhira R, Tang H, Montefiori DC, Johnson WE, Rose JK: Significant protection against high-dose simian immunodeficiency virus challenge conferred by a new prime-boost vaccine regimen. J Virol. 2011 Jun; 2011 Apr 13. PMID: 21490100

Kumamoto Y, Mattei LM, Sellers S, Payne GW, Iwasaki A: CD4+ T cells support cytotoxic T lymphocyte priming by controlling lymph node input. Proc Natl Acad Sci U S A. 2011 May 24; 2011 May 9. PMID: 21555577

Alexandrov A, Colognori D, Steitz JA: Human eIF4AIII interacts with an eIF4G-like partner, NOM1, revealing an evolutionarily conserved function outside the exon junction complex. Genes Dev. 2011 May 15. PMID: 21576267

Burton JL, Xiong Y, Solomon MJ: Mechanisms of pseudosubstrate inhibition of the anaphase promoting complex by Acm1. EMBO J. 2011 May 4; 2011 Apr 1. PMID: 21460798

Wrzesinski SH, Taddei TH, Strazzabosco M: Systemic therapy in hepatocellular carcinoma. Clin Liver Dis. 2011 May. PMID: 21689622

Akgün KM, Pisani M, Crothers K: The changing epidemiology of HIV-infected patients in the intensive care unit. J Intensive Care Med. 2011 May-Jun; 2011 Mar 24. PMID: 21436170

Schwartz JA, Buonocore L, Suguitan A Jr, Hunter M, Marx PA, Subbarao K, Rose JK: Vesicular stomatitis virus-based H5N1 avian influenza vaccines induce potent cross-clade neutralizing antibodies in rhesus macaques. J Virol. 2011 May; 2011 Feb 16. PMID: 21325423

Barry DT, Goulet JL, Kerns RK, Becker WC, Gordon AJ, Justice AC, Fiellin DA: Nonmedical use of prescription opioids and pain in veterans with and without HIV. Pain. 2011 May; 2011 Feb 26. PMID: 21354703

Foxman EF, Iwasaki A: Genome-virome interactions: examining the role of common viral infections in complex disease. Nat Rev Microbiol. 2011 Apr. PMID: 21407242

Ichinohe T, Pang IK, Kumamoto Y, Peaper DR, Ho JH, Murray TS, Iwasaki A: Microbiota regulates immune defense against respiratory tract influenza A virus infection. Proc Natl Acad Sci U S A. 2011 Mar 29; 2011 Mar 14. PMID: 21402903

Butler EB, Xiong Y, Wang J, Strobel SA: Structural basis of cooperative ligand binding by the glycine riboswitch. Chem Biol. 2011 Mar 25. PMID: 21439473

Lara-Tejero M, Kato J, Wagner S, Liu X, Galán JE: A sorting platform determines the order of protein secretion in bacterial type III systems. Science. 2011 Mar 4; 2011 Feb 3. PMID: 21292939

Steitz J, Borah S, Cazalla D, Fok V, Lytle R, Mitton-Fry R, Riley K, Samji T: Noncoding RNPs of viral origin. Cold Spring Harb Perspect Biol. 2011 Mar 1; 2011 Mar 1. PMID: 20719877

Chattopadhyay A, Rose JK: Complementing defective viruses that express separate paramyxovirus glycoproteins provide a new vaccine vector approach. J Virol. 2011 Mar; 2010 Dec 22. PMID: 21177820

Marlatt SA, Kong Y, Cammett TJ, Korbel G, Noonan JP, Dimaio D: Construction and maintenance of randomized retroviral expression libraries for transmembrane protein engineering. Protein Eng Des Sel. 2011 Mar; 2010 Dec 10. PMID: 21149273

Ruiz Z, Mihaylov IS, Cotmore SF, Tattersall P: Recruitment of DNA replication and damage response proteins to viral replication centers during infection with NS2 mutants of Minute Virus of Mice (MVM). Virology. 2011 Feb 20; 2010 Dec 30. PMID: 21193212

Martinez I, Almstead LL, DiMaio D: MicroRNAs and senescence. Aging (Albany NY). 2011 Feb. PMID: 21304181

Paintsil E, Dutschman GE, Hu R, Grill SP, Wang CJ, Lam W, Li FY, Ghebremichael M, Northrup V, Cheng YC: Determinants of individual variation in intracellular accumulation of anti-HIV nucleoside analog metabolites. Antimicrob Agents Chemother. 2011 Feb; 2010 Nov 15. PMID: 21078952

Stapleford KA, Lindenbach BD: Hepatitis C virus NS2 coordinates virus particle assembly through physical interactions with the E1-E2 glycoprotein and NS3-NS4A enzyme complexes. J Virol. 2011 Feb; 2010 Dec 8. PMID: 21147927

Phan T, Kohlway A, Dimberu P, Pyle AM, Lindenbach BD: The acidic domain of hepatitis C virus NS4A contributes to RNA replication and virus particle assembly. J Virol. 2011 Feb; 2010 Nov 3. PMID: 21047963

Lindenbach BD: Understanding how hepatitis C virus builds its unctuous home. Cell Host Microbe. 2011 Jan 20. PMID: 21238940

Martinez I, Cazalla D, Almstead LL, Steitz JA, DiMaio D: miR-29 and miR-30 regulate B-Myb expression during cellular senescence. Proc Natl Acad Sci U S A. 2011 Jan 11; 2010 Dec 27. PMID: 21187425

Iijima N, Mattei LM, Iwasaki A: Recruited inflammatory monocytes stimulate antiviral Th1 immunity in infected tissue. Proc Natl Acad Sci U S A. 2011 Jan 4; 2010 Dec 20. PMID: 21173243

Paintsil E: Monitoring Antiretroviral Therapy in HIV-Infected Children in Resource-Limited Countries: A Tale of Two Epidemics. AIDS Res Treat. 2011; 2010 Dec 2. PMID: 21490777

Kozal MJ, Chiarella J, St John EP, Moreno EA, Simen BB, Arnold TE, Lataillade M: Prevalence of low-level HIV-1 variants with reverse transcriptase mutation K65R and the effect of antiretroviral drug exposure on variant levels. Antivir Ther. 2011. PMID: 21900725

Pang IK, Iwasaki A: Inflammasomes as mediators of immunity against influenza virus. Trends Immunol. 2011 Jan; 2010 Dec 14. PMID: 21147034

Brandsma JL, Shlyankevich M, Su Y, Zelterman D, Rose JK, Buonocore L: Reversal of papilloma growth in rabbits therapeutically vaccinated against E6 with naked DNA and/or vesicular stomatitis virus vectors. Vaccine. 2010 Dec 6; 2009 Jul 15. PMID: 19615481

Mattocks KM, Skanderson M, Goulet JL, Brandt C, Womack J, Krebs E, Desai R, Justice A, Yano E, Haskell S: Pregnancy and mental health among women veterans returning from Iraq and Afghanistan. J Womens Health (Larchmt). 2010 Dec; 2010 Nov 1. PMID: 21039234

Mitton-Fry RM, DeGregorio SJ, Wang J, Steitz TA, Steitz JA: Poly(A) tail recognition by a viral RNA element through assembly of a triple helix. Science. 2010 Nov 26. PMID: 21109672

Pan B, Xiong Y, Steitz TA: How the CCA-adding enzyme selects adenine over cytosine at position 76 of tRNA. Science. 2010 Nov 12. PMID: 21071662

Yang H, Wang J, Jia X, McNatt MW, Zang T, Pan B, Meng W, Wang HW, Bieniasz PD, Xiong Y: Structural insight into the mechanisms of enveloped virus tethering by tetherin. Proc Natl Acad Sci U S A. 2010 Oct 26; 2010 Oct 12. PMID: 20940320

Song J, Willinger T, Rongvaux A, Eynon EE, Stevens S, Manz MG, Flavell RA, Galán JE: A mouse model for the human pathogen Salmonella typhi. Cell Host Microbe. 2010 Oct 21. PMID: 20951970

Wagner S, Königsmaier L, Lara-Tejero M, Lefebre M, Marlovits TC, Galán JE: Organization and coordinated assembly of the type III secretion export apparatus. Proc Natl Acad Sci U S A. 2010 Oct 12; 2010 Sep 27. PMID: 20876096

Paintsil E, He H, Peters C, Lindenbach BD, Heimer R: Survival of hepatitis C virus in syringes: implication for transmission among injection drug users. J Infect Dis. 2010 Oct 1. PMID: 20726768

Iwasaki A: Antiviral immune responses in the genital tract: clues for vaccines. Nat Rev Immunol. 2010 Oct; 2010 Sep 10. PMID: 20829886

Zingler N, Solem A, Pyle AM: Dual roles for the Mss116 cofactor during splicing of the ai5γ group II intron. Nucleic Acids Res. 2010 Oct; 2010 Jun 16. PMID: 20554854

Wolfe LS, Calabrese MF, Nath A, Blaho DV, Miranker AD, Xiong Y: Protein-induced photophysical changes to the amyloid indicator dye thioflavin T. Proc Natl Acad Sci U S A. 2010 Sep 28; 2010 Sep 8. PMID: 20826442

Sasai M, Linehan MM, Iwasaki A: Bifurcation of Toll-like receptor 9 signaling by adaptor protein 3. Science. 2010 Sep 17. PMID: 20847273

Mothes W, Sherer NM, Jin J, Zhong P: Virus cell-to-cell transmission. J Virol. 2010 Sep; 2010 Apr 7. PMID: 20375157

El-Guindy A, Heston L, Miller G: A subset of replication proteins enhances origin recognition and lytic replication by the Epstein-Barr virus ZEBRA protein. PLoS Pathog. 2010 Aug 19; 2010 Aug 19. PMID: 20808903

Matranga C, Pyle AM: Double-stranded RNA-dependent ATPase DRH-3: insight into its role in RNAsilencing in Caenorhabditis elegans. J Biol Chem. 2010 Aug 13; 2010 Jun 7. PMID: 20529861

Papas RK, Sidle JE, Wamalwa ES, Okumu TO, Bryant KL, Goulet JL, Maisto SA, Braithwaite RS, Justice AC: Estimating alcohol content of traditional brew in Western Kenya using culturally relevant methods: the case for cost over volume. AIDS Behav. 2010 Aug; 2008 Nov 18. PMID: 19015972

Green TC, Kershaw T, Lin H, Heimer R, Goulet JL, Kraemer KL, Gordon AJ, Maisto SA, Day NL, Bryant K, Fiellin DA, Justice AC: Patterns of drug use and abuse among aging adults with and without HIV: a latent class analysis of a US Veteran cohort. Drug Alcohol Depend. 2010 Aug 1; 2010 Apr 15. PMID: 20395074

Novik V, Hofreuter D, Galán JE: Identification of Campylobacter jejuni genes involved in its interaction with epithelial cells. Infect Immun. 2010 Aug; 2010 Jun 1. PMID: 20515930

Cobleigh MA, Buonocore L, Uprichard SL, Rose JK, Robek MD: A vesicular stomatitis virus-based hepatitis B virus vaccine vector provides protection against challenge in a single dose. J Virol. 2010 Aug; 2010 May 26. PMID: 20504927

Fu LY, van den Pol AN: Kisspeptin directly excites anorexigenic proopiomelanocortin neurons but inhibits orexigenic neuropeptide Y cells by an indirect synaptic mechanism. J Neurosci. 2010 Jul 28. PMID: 20668204

Acuna-Goycolea C, Obrietan K, van den Pol AN: Cannabinoids excite circadian clock neurons. J Neurosci. 2010 Jul 28. PMID: 20668190

Hooshyar D, Goulet J, Chwastiak L, Crystal S, Gibert C, Mattocks K, Rimland D, Rodriguez-Barradas M, Justice AC, VACS Project Team.: Time to depression treatment in primary care among HIV-infected and uninfected veterans. J Gen Intern Med. 2010 Jul; 2010 Apr 20. PMID: 20405335

Wolfe LS, Stanley BJ, Liu C, Eliason WK, Xiong Y: Dissection of the HIV Vif interaction with human E3 ubiquitin ligase. J Virol. 2010 Jul; 2010 May 12. PMID: 20463065

Caldwell C, Werdiger N, Jakab S, Schilsky M, Arvelakis A, Kulkarni S, Emre S: Use of model for end-stage liver disease exception points for early liver transplantation and successful reversal of hepatic myelopathy with a review of the literature. Liver Transpl. 2010 Jul. PMID: 20583082

Duggal M, Goulet JL, Womack J, Gordon K, Mattocks K, Haskell SG, Justice AC, Brandt CA: Comparison of outpatient health care utilization among returning women and men veterans from Afghanistan and Iraq. BMC Health Serv Res. 2010 Jun 22; 2010 Jun 22. PMID: 20565985

Cazalla D, Yario T, Steitz JA: Down-regulation of a host microRNA by a Herpesvirus saimiri noncoding RNA. Science. 2010 Jun 18. PMID: 20558719

Papas RK, Sidle JE, Martino S, Baliddawa JB, Songole R, Omolo OE, Gakinya BN, Mwaniki MM, Adina JO, Nafula T, Owino-Ong'or WD, Bryant KJ, Carroll KM, Goulet JL, Justice AC, Maisto SA: Systematic cultural adaptation of cognitive-behavioral therapy to reduce alcohol use among HIV-infected outpatients in western Kenya. AIDS Behav. 2010 Jun. PMID: 19967441

Pyle AM: The tertiary structure of group II introns: implications for biological function and evolution. Crit Rev Biochem Mol Biol. 2010 Jun. PMID: 20446804

Taddei TH, Dziura J, Chen S, Yang R, Hyogo H, Sullards C, Cohen DE, Pastores G, Mistry PK: High incidence of cholesterol gallstone disease in type 1 Gaucher disease: characterizing the biliary phenotype of type 1 Gaucher disease. J Inherit Metab Dis. 2010 Jun; 2010 Mar 31. PMID: 20354791

Brodsky IE, Palm NW, Sadanand S, Ryndak MB, Sutterwala FS, Flavell RA, Bliska JB, Medzhitov R: A Yersinia effector protein promotes virulence by preventing inflammasome recognition of the type III secretion system. Cell Host Microbe. 2010 May 20. PMID: 20478539

Keating KS, Pyle AM: Semiautomated model building for RNA crystallography using a directed rotameric approach. Proc Natl Acad Sci U S A. 2010 May 4; 2010 Apr 19. PMID: 20404211

Kim N, Agostini JV, Justice AC: Refill adherence to oral hypoglycemic agents and glycemic control in veterans. Ann Pharmacother. 2010 May; 2010 Apr 13. PMID: 20388863

Justice AC: HIV and aging: time for a new paradigm. Curr HIV/AIDS Rep. 2010 May. PMID: 20425560

Riley KJ, Rabinowitz GS, Steitz JA: Comprehensive analysis of Rhesus lymphocryptovirus microRNA expression. J Virol. 2010 May; 2010 Mar 10. PMID: 20219930

Schwartz JA, Buonocore L, Suguitan AL Jr, Silaghi A, Kobasa D, Kobinger G, Feldmann H, Subbarao K, Rose JK: Potent vesicular stomatitis virus-based avian influenza vaccines provide long-term sterilizing immunity against heterologous challenge. J Virol. 2010 May; 2010 Feb 24. PMID: 20181720

Ichinohe T, Pang IK, Iwasaki A: Influenza virus activates inflammasomes via its intracellular M2 ion channel. Nat Immunol. 2010 May; 2010 Apr 11. PMID: 20383149

Taylor SD, Solem A, Kawaoka J, Pyle AM: The NPH-II helicase displays efficient DNA x RNA helicase activity and a pronounced purine sequence bias. J Biol Chem. 2010 Apr 9; 2010 Jan 28. PMID: 20110368

Fedorova O, Solem A, Pyle AM: Protein-facilitated folding of group II intron ribozymes. J Mol Biol. 2010 Apr 2; 2010 Feb 6. PMID: 20138894

Sueoka K, Goulet JL, Fiellin DA, Rimland D, Butt AA, Gibert C, Rodriguez-Barradas MC, Bryant K, Crystal S, Justice AC: Depression symptoms and treatment among HIV infected and uninfected veterans. AIDS Behav. 2010 Apr; 2008 Jul 22. PMID: 18648927

Simon ID, van Rooijen N, Rose JK: Vesicular stomatitis virus genomic RNA persists in vivo in the absence of viral replication. J Virol. 2010 Apr; 2009 Dec 23. PMID: 20032173

Harding MJ, Lepus CM, Gibson TF, Shepherd BR, Gerber SA, Graham M, Paturzo FX, Rahner C, Madri JA, Bothwell AL, Lindenbach BD, Pober JS: An implantable vascularized protein gel construct that supports human fetal hepatoblast survival and infection by hepatitis C virus in mice. PLoS One. 2010 Apr 1; 2010 Apr 1. PMID: 20376322

Murphy JW, Yuan H, Kong Y, Xiong Y, Lolis EJ: Heterologous quaternary structure of CXCL12 and its relationship to the CC chemokine family. Proteins. 2010 Apr. PMID: 20077567

Roitzsch M, Fedorova O, Pyle AM: The 2'-OH group at the group II intron terminus acts as a proton shuttle. Nat Chem Biol. 2010 Mar; 2010 Jan 31. PMID: 20118939

Lee HK, Mattei LM, Steinberg BE, Alberts P, Lee YH, Chervonsky A, Mizushima N, Grinstein S, Iwasaki A: In vivo requirement for Atg5 in antigen presentation by dendritic cells. Immunity. 2010 Feb 26; 2010 Feb 18. PMID: 20171125

Cammett TJ, Jun SJ, Cohen EB, Barrera FN, Engelman DM, Dimaio D: Construction and genetic selection of small transmembrane proteins that activate the human erythropoietin receptor. Proc Natl Acad Sci U S A. 2010 Feb 23; 2010 Feb 8. PMID: 20142506

Hicks SW, Galán JE: Hijacking the host ubiquitin pathway: structural strategies of bacterial E3 ubiquitin ligases. Curr Opin Microbiol. 2010 Feb; 2009 Dec 28. PMID: 20036613

Cotmore SF, Hafenstein S, Tattersall P: Depletion of virion-associated divalent cations induces parvovirus minute virus of mice to eject its genome in a 3'-to-5' direction from an otherwise intact viral particle. J Virol. 2010 Feb; 2009 Dec 2. PMID: 19955311

Davis JN, van den Pol AN: Viral mutagenesis as a means for generating novel proteins. J Virol. 2010 Feb; 2009 Nov 11. PMID: 19906913

Wollmann G, Rogulin V, Simon I, Rose JK, van den Pol AN: Some attenuated variants of vesicular stomatitis virus show enhanced oncolytic activity against human glioblastoma cells relative to normal brain cells. J Virol. 2010 Feb; 2009 Nov 11. PMID: 19906910

Jin J, Sherer N, Mothes W: Surface Transmission or Polarized Egress? Lessons Learned from HTLV Cell-to-Cell Transmission. Viruses. 2010 Feb; 2010 Feb 10. PMID: 21994650

van den Pol AN: Excitatory neuromodulator reduces dopamine release, enhancing prolactin secretion. Neuron. 2010 Jan 28. PMID: 20152122

Iwasaki A, Medzhitov R: Regulation of adaptive immunity by the innate immune system. Science. 2010 Jan 15. PMID: 20075244

Cheng Y, Tsou LK, Cai J, Aya T, Dutschman GE, Gullen EA, Grill SP, Chen AP, Lindenbach BD, Hamilton AD, Cheng YC: A novel class of meso-tetrakis-porphyrin derivatives exhibits potent activities against hepatitis C virus genotype 1b replicons in vitro. Antimicrob Agents Chemother. 2010 Jan; 2009 Nov 9. PMID: 19901090

Akgün KM, Murphy TE, Araujo KL, Van Ness PH, Pisani M: Does gender impact intensity of care provided to older medical intensive care unit patients? Crit Care Res Pract. 2010; 2010 Oct 20. PMID: 20981259

Daigle D, Megyola C, El-Guindy A, Gradoville L, Tuck D, Miller G, Bhaduri-McIntosh S: Upregulation of STAT3 marks Burkitt lymphoma cells refractory to Epstein-Barr virus lytic cycle induction by HDAC inhibitors. J Virol. 2010 Jan; 2009 Nov 4. PMID: 19889776

Toor N, Keating KS, Fedorova O, Rajashankar K, Wang J, Pyle AM: Tertiary architecture of the Oceanobacillus iheyensis group II intron. RNA. 2010 Jan; 2009 Dec 1. PMID: 19952115

Keating KS, Toor N, Perlman PS, Pyle AM: A structural analysis of the group II intron active site and implications for the spliceosome. RNA. 2010 Jan; 2009 Nov 30. PMID: 19948765

Pawlicki JM, Steitz JA: Nuclear networking fashions pre-messenger RNA and primary microRNA transcripts for function. Trends Cell Biol. 2010 Jan; 2009 Dec 11. PMID: 20004579

Li Y, van den Pol AN: Enhanced excitatory input to melanin concentrating hormone neurons during developmental period of high food intake is mediated by GABA. J Neurosci. 2009 Dec 2. PMID: 19955372

Novik V, Hofreuter D, Galán JE: Characterization of a Campylobacter jejuni VirK protein homolog as a novel virulence determinant. Infect Immun. 2009 Dec; 2009 Sep 21. PMID: 19797067

Nakanishi Y, Lu B, Gerard C, Iwasaki A: CD8(+) T lymphocyte mobilization to virus-infected tissue requires CD4(+) T-cell help. Nature. 2009 Nov 26; 2009 Nov 8. PMID: 19898495

Paintsil E, Verevochkin SV, Dukhovlinova E, Niccolai L, Barbour R, White E, Toussova OV, Alexander L, Kozlov AP, Heimer R: Hepatitis C virus infection among drug injectors in St Petersburg, Russia: social and molecular epidemiology of an endemic infection. Addiction. 2009 Nov; 2009 Aug 27. PMID: 19712125

Yang G, Paintsil E, Dutschman GE, Grill SP, Wang CJ, Wang J, Tanaka H, Hamasaki T, Baba M, Cheng YC: Impact of novel human immunodeficiency virus type 1 reverse transcriptase mutations P119S and T165A on 4'-ethynylthymidine analog resistance profile. Antimicrob Agents Chemother. 2009 Nov; 2009 Aug 24. PMID: 19704131

Ozduman K, Wollmann G, Ahmadi SA, van den Pol AN: Peripheral immunization blocks lethal actions of vesicular stomatitis virus within the brain. J Virol. 2009 Nov; 2009 Sep 2. PMID: 19726512

Pyle AM: How to drive your helicase in a straight line. Cell. 2009 Oct 30. PMID: 19879832

Dela Cruz CS, Viswanathan SR, El-Guindy AS, Shedd D, Miller G: Complex N-linked glycans on Asn-89 of Kaposi sarcoma herpes virus-encoded interleukin-6 mediate optimal function by affecting cytokine protein conformation. J Biol Chem. 2009 Oct 23; 2009 Aug 18. PMID: 19690161

van den Pol AN, Ozduman K, Wollmann G, Ho WS, Simon I, Yao Y, Rose JK, Ghosh P: Viral strategies for studying the brain, including a replication-restricted self-amplifying delta-G vesicular stomatis virus that rapidly expresses transgenes in brain and can generate a multicolor golgi-like expression. J Comp Neurol. 2009 Oct 20. PMID: 19672982

Wang Z, Kumamoto Y, Wang P, Gan X, Lehmann D, Smrcka AV, Cohn L, Iwasaki A, Li L, Wu D: Regulation of immature dendritic cell migration by RhoA guanine nucleotide exchange factor Arhgef5. J Biol Chem. 2009 Oct 16; 2009 Aug 27. PMID: 19713215

van den Pol AN: Viral infection leading to brain dysfunction: more prevalent than appreciated? Neuron. 2009 Oct 15. PMID: 19840542

Wu M, Dumalska I, Morozova E, van den Pol A, Alreja M: Melanin-concentrating hormone directly inhibits GnRH neurons and blocks kisspeptin activation, linking energy balance to reproduction. Proc Natl Acad Sci U S A. 2009 Oct 6; 2009 Sep 21. PMID: 19805188

Steitz JA, Vasudevan S: miRNPs: versatile regulators of gene expression in vertebrate cells. Biochem Soc Trans. 2009 Oct. PMID: 19754429

Talbert-Slagle K, Marlatt S, Barrera FN, Khurana E, Oates J, Gerstein M, Engelman DM, Dixon AM, Dimaio D: Artificial transmembrane oncoproteins smaller than the bovine papillomavirus E5 protein redefine sequence requirements for activation of the platelet-derived growth factor beta receptor. J Virol. 2009 Oct; 2009 Jul 15. PMID: 19605488

Phan T, Beran RK, Peters C, Lorenz IC, Lindenbach BD: Hepatitis C virus NS2 protein contributes to virus particle assembly via opposing epistatic interactions with the E1-E2 glycoprotein and NS3-NS4A enzyme complexes. J Virol. 2009 Sep; 2009 Jun 10. PMID: 19515772

Du F, Galán JE: Selective inhibition of type III secretion activated signaling by the Salmonella effector AvrA. PLoS Pathog. 2009 Sep; 2009 Sep 25. PMID: 19779561

Bruno VM, Hannemann S, Lara-Tejero M, Flavell RA, Kleinstein SH, Galán JE: Salmonella Typhimurium type III secretion effectors stimulate innate immune responses in cultured epithelial cells. PLoS Pathog. 2009 Aug; 2009 Aug 7. PMID: 19662166

Tal MC, Iwasaki A: Autophagic control of RLR signaling. Autophagy. 2009 Jul. PMID: 19571662

Lara-Tejero M, Galán JE: Salmonella enterica serovar typhimurium pathogenicity island 1-encoded type III secretion system translocases mediate intimate attachment to nonphagocytic cells. Infect Immun. 2009 Jul; 2009 Apr 13. PMID: 19364837

Jin J, Sherer NM, Heidecker G, Derse D, Mothes W: Assembly of the murine leukemia virus is directed towards sites of cell-cell contact. PLoS Biol. 2009 Jul; 2009 Jul 28. PMID: 19636361

Le T, Chiarella J, Simen BB, Hanczaruk B, Egholm M, Landry ML, Dieckhaus K, Rosen MI, Kozal MJ: Low-abundance HIV drug-resistant viral variants in treatment-experienced persons correlate with historical antiretroviral use. PLoS One. 2009 Jun 29; 2009 Jun 29. PMID: 19562031

Galán JE: Common themes in the design and function of bacterial effectors. Cell Host Microbe. 2009 Jun 18. PMID: 19527884

Crothers K, Goulet JL, Rodriguez-Barradas MC, Gibert CL, Oursler KA, Goetz MB, Crystal S, Leaf DA, Butt AA, Braithwaite RS, Peck R, Justice AC: Impact of cigarette smoking on mortality in HIV-positive and HIV-negative veterans. AIDS Educ Prev. 2009 Jun. PMID: 19537953

Toor N, Keating KS, Pyle AM: Structural insights into RNA splicing. Curr Opin Struct Biol. 2009 Jun; 2009 May 13. PMID: 19443210

Goodwin EC, Atwood WJ, DiMaio D: High-throughput cell-based screen for chemicals that inhibit infection by simian virus 40 and human polyomaviruses. J Virol. 2009 Jun; 2009 Mar 18. PMID: 19297472

Braithwaite RS, Fiellin D, Justice AC: The payoff time: a flexible framework to help clinicians decide when patients with comorbid disease are not likely to benefit from practice guidelines. Med Care. 2009 Jun. PMID: 19433991

Ichinohe T, Iwasaki A: [Inflammasomes in viral infection]. Uirusu. 2009 Jun. PMID: 19927984

Uchil PD, Mothes W: HIV Entry Revisited. Cell. 2009 May 1. PMID: 19410537

Randau L, Stanley BJ, Kohlway A, Mechta S, Xiong Y, Söll D: A cytidine deaminase edits C to U in transfer RNAs in Archaea. Science. 2009 May 1. PMID: 19407206

Paintsil E, Grill SP, Dutschman GE, Cheng YC: Comparative study of the persistence of anti-HIV activity of deoxynucleoside HIV reverse transcriptase inhibitors after removal from culture. AIDS Res Ther. 2009 Apr 22; 2009 Apr 22. PMID: 19386130

Patel JC, Hueffer K, Lam TT, Galán JE: Diversification of a Salmonella virulence protein function by ubiquitin-dependent differential localization. Cell. 2009 Apr 17. PMID: 19379694

Tycowski KT, Shu MD, Kukoyi A, Steitz JA: A conserved WD40 protein binds the Cajal body localization signal of scaRNP particles. Mol Cell. 2009 Apr 10; 2009 Mar 12. PMID: 19285445

van den Pol AN, Yao Y, Fu LY, Foo K, Huang H, Coppari R, Lowell BB, Broberger C: Neuromedin B and gastrin-releasing peptide excite arcuate nucleus neuropeptide Y neurons in a novel transgenic mouse expressing strong Renilla green fluorescent protein in NPY neurons. J Neurosci. 2009 Apr 8. PMID: 19357287

Taddei TH, Kacena KA, Yang M, Yang R, Malhotra A, Boxer M, Aleck KA, Rennert G, Pastores GM, Mistry PK: The underrecognized progressive nature of N370S Gaucher disease and assessment of cancer risk in 403 patients. Am J Hematol. 2009 Apr. PMID: 19260119

Wu M, Dumalska I, Morozova E, van den Pol AN, Alreja M: Gonadotropin inhibitory hormone inhibits basal forebrain vGluT2-gonadotropin-releasing hormone neurons via a direct postsynaptic mechanism. J Physiol. 2009 Apr 1; 2009 Feb 9. PMID: 19204051

Beran RK, Lindenbach BD, Pyle AM: The NS4A protein of hepatitis C virus promotes RNA-coupled ATP hydrolysis by the NS3 helicase. J Virol. 2009 Apr; 2009 Jan 19. PMID: 19153239

Palm NW, Medzhitov R: Immunostimulatory activity of haptenated proteins. Proc Natl Acad Sci U S A. 2009 Mar 24; 2009 Mar 2. PMID: 19255434

Braithwaite RS, Roberts MS, Goetz MB, Gibert CL, Rodriguez-Barradas MC, Nucifora K, Justice AC: Do benefits of earlier antiretroviral treatment initiation outweigh harms for individuals at risk for poor adherence? Clin Infect Dis. 2009 Mar 15. PMID: 19210173

Gupta S, Lataillade M, Farber S, Kozal MJ: Raltegravir with unboosted atazanavir 300 mg twice daily in antiretroviral treatment-experienced participants. J Int Assoc Physicians AIDS Care (Chic). 2009 Mar-Apr; 2009 Mar 6. PMID: 19270153

Roitzsch M, Pyle AM: The linear form of a group II intron catalyzes efficient autocatalytic reverse splicing, establishing a potential for mobility. RNA. 2009 Mar; 2009 Jan 23. PMID: 19168748

Borah S, Wong AC, Steitz JA: Drosophila hnRNP A1 homologs Hrp36/Hrp38 enhance U2-type versus U12-type splicing to regulate alternative splicing of the prospero twintron. Proc Natl Acad Sci U S A. 2009 Feb 24; 2009 Feb 5. PMID: 19196985

Tal MC, Sasai M, Lee HK, Yordy B, Shadel GS, Iwasaki A: Absence of autophagy results in reactive oxygen species-dependent amplification of RLR signaling. Proc Natl Acad Sci U S A. 2009 Feb 24; 2009 Feb 5. PMID: 19196953

Talbert-Slagle K, DiMaio D: The bovine papillomavirus E5 protein and the PDGF beta receptor: it takes two to tango. Virology. 2009 Feb 20; 2008 Nov 6. PMID: 18990418

Lee HK, Zamora M, Linehan MM, Iijima N, Gonzalez D, Haberman A, Iwasaki A: Differential roles of migratory and resident DCs in T cell priming after mucosal or skin HSV-1 infection. J Exp Med. 2009 Feb 16; 2009 Jan 19. PMID: 19153243

Schell J, Rose NF, Fazo N, Marx PA, Hunter M, Ramsburg E, Montefiori D, Earl P, Moss B, Rose JK: Long-term vaccine protection from AIDS and clearance of viral DNA following SHIV89.6P challenge. Vaccine. 2009 Feb 11; 2009 Jan 7. PMID: 19135115

Acuna-Goycolea C, van den Pol AN: Neuroendocrine proopiomelanocortin neurons are excited by hypocretin/orexin. J Neurosci. 2009 Feb 4. PMID: 19193897

Pawlicki JM, Steitz JA: Subnuclear compartmentalization of transiently expressed polyadenylated pri-microRNAs: processing at transcription sites or accumulation in SC35 foci. Cell Cycle. 2009 Feb 1; 2009 Feb 21. PMID: 19177009

Paintsil E, Andiman WA: Update on successes and challenges regarding mother-to-child transmission of HIV. Curr Opin Pediatr. 2009 Feb. PMID: 19242245

Serebrov V, Beran RK, Pyle AM: Establishing a mechanistic basis for the large kinetic steps of the NS3 helicase. J Biol Chem. 2009 Jan 23; 2008 Nov 14. PMID: 19010782

Ichinohe T, Lee HK, Ogura Y, Flavell R, Iwasaki A: Inflammasome recognition of influenza virus is essential for adaptive immune responses. J Exp Med. 2009 Jan 16; 2009 Jan 12. PMID: 19139171

Tal MC, Iwasaki A: Autophagy and innate recognition systems. Curr Top Microbiol Immunol. 2009. PMID: 19802562

Palm NW, Medzhitov R: Pattern recognition receptors and control of adaptive immunity. Immunol Rev. 2009 Jan. PMID: 19120487

van den Pol AN: Brain trauma enhances transient cytomegalovirus invasion of the brain only in mice that are immunodeficient. J Virol. 2009 Jan; 2008 Oct 22. PMID: 18945784

Lindenbach BD: Measuring HCV infectivity produced in cell culture and in vivo. Methods Mol Biol. 2009. PMID: 19009272

Iijima N, Iwasaki A: [Mucosal immune defense against sexually transmitted diseases]. Nihon Rinsho. 2009 Jan. PMID: 19177745

Iijima N, Linehan MM, Zamora M, Butkus D, Dunn R, Kehry MR, Laufer TM, Iwasaki A: Dendritic cells and B cells maximize mucosal Th1 memory response to herpes simplex virus. J Exp Med. 2008 Dec 22; 2008 Dec 1. PMID: 19047439

Mishler DM, Christ AB, Steitz JA: Flexibility in the site of exon junction complex deposition revealed by functional group and RNA secondary structure alterations in the splicing substrate. RNA. 2008 Dec; 2008 Oct 24. PMID: 18952819

Chattopadhyay A, Park S, Delmas G, Suresh R, Senina S, Perlin DS, Rose JK: Single-dose, virus-vectored vaccine protection against Yersinia pestis challenge: CD4+ cells are required at the time of challenge for optimal protection. Vaccine. 2008 Nov 25; 2008 Oct 1. PMID: 18832004

Keating KS, Toor N, Pyle AM: The GANC tetraloop: a novel motif in the group IIC intron structure. J Mol Biol. 2008 Nov 14; 2008 Aug 26. PMID: 18773908

Hofreuter D, Novik V, Galán JE: Metabolic diversity in Campylobacter jejuni enhances specific tissue colonization. Cell Host Microbe. 2008 Nov 13. PMID: 18996343

Ichinohe T, Iwasaki A, Hasegawa H: Innate sensors of influenza virus: clues to developing better intranasal vaccines. Expert Rev Vaccines. 2008 Nov. PMID: 18980544

Toor N, Rajashankar K, Keating KS, Pyle AM: Structural basis for exon recognition by a group II intron. Nat Struct Mol Biol. 2008 Nov; 2008 Oct 26. PMID: 18953333

Beran RK, Pyle AM: Hepatitis C viral NS3-4A protease activity is enhanced by the NS3 helicase. J Biol Chem. 2008 Oct 31; 2008 Aug 22. PMID: 18723512

Yates KE, Korbel GA, Shtutman M, Roninson IB, DiMaio D: Repression of the SUMO-specific protease Senp1 induces p53-dependent premature senescence in normal human fibroblasts. Aging Cell. 2008 Oct; 2008 Jul 24. PMID: 18616636

Kolev NG, Yario TA, Benson E, Steitz JA: Conserved motifs in both CPSF73 and CPSF100 are required to assemble the active endonuclease for histone mRNA 3'-end maturation. EMBO Rep. 2008 Oct; 2008 Aug 8. PMID: 18688255

Braithwaite RS, Conigliaro J, McGinnis KA, Maisto SA, Bryant K, Justice AC: Adjusting alcohol quantity for mean consumption and intoxication threshold improves prediction of nonadherence in HIV patients and HIV-negative controls. Alcohol Clin Exp Res. 2008 Sep; 2008 Jul 9. PMID: 18616666

Stanley BJ, Ehrlich ES, Short L, Yu Y, Xiao Z, Yu XF, Xiong Y: Structural insight into the human immunodeficiency virus Vif SOCS box and its role in human E3 ubiquitin ligase assembly. J Virol. 2008 Sep; 2008 Jun 18. PMID: 18562529

Braithwaite RS, Goulet J, Kudel I, Tsevat J, Justice AC: Quantifying the decrement in utility from perceived side effects of combination antiretroviral therapies in patients with HIV. Value Health. 2008 Sep-Oct; 2008 Jan 22. PMID: 18225989

Dumalska I, Wu M, Morozova E, Liu R, van den Pol A, Alreja M: Excitatory effects of the puberty-initiating peptide kisspeptin and group I metabotropic glutamate receptor agonists differentiate two distinct subpopulations of gonadotropin-releasing hormone neurons. J Neurosci. 2008 Aug 6. PMID: 18685025

Chan WT, Sherer NM, Uchil PD, Novak EK, Swank RT, Mothes W: Murine leukemia virus spreading in mice impaired in the biogenesis of secretory lysosomes and Ca2+-regulated exocytosis. PLoS One. 2008 Jul 16; 2008 Jul 16. PMID: 18629000

Pawlicki JM, Steitz JA: Primary microRNA transcript retention at sites of transcription leads to enhanced microRNA production. J Cell Biol. 2008 Jul 14. PMID: 18625843

Kahn JS, Kesebir D, Cotmore SF, D'Abramo A Jr, Cosby C, Weibel C, Tattersall P: Seroepidemiology of human bocavirus defined using recombinant virus-like particles. J Infect Dis. 2008 Jul 1. PMID: 18491974

Paintsil E, Ghebremichael M, Romano S, Andiman WA: Absolute CD4+ T-lymphocyte count as a surrogate marker of pediatric human immunodeficiency virus disease progression. Pediatr Infect Dis J. 2008 Jul. PMID: 18520446

Steitz JA, Dreyfuss G, Krainer AR, Lamond AI, Matera AG, Padgett RA: Where in the cell is the minor spliceosome? Proc Natl Acad Sci U S A. 2008 Jun 24; 2008 Jun 17. PMID: 18562285

Kapadia SU, Simon ID, Rose JK: SARS vaccine based on a replication-defective recombinant vesicular stomatitis virus is more potent than one based on a replication-competent vector. Virology. 2008 Jun 20; 2008 Apr 8. PMID: 18396306

Liu-Young G, Kozal MJ: Hepatitis C protease and polymerase inhibitors in development. AIDS Patient Care STDS. 2008 Jun. PMID: 18479202

Vasudevan S, Tong Y, Steitz JA: Cell-cycle control of microRNA-mediated translation regulation. Cell Cycle. 2008 Jun 1; 2008 Mar 25. PMID: 18469529

Fedorova O, Pyle AM: A conserved element that stabilizes the group II intron active site. RNA. 2008 Jun; 2008 Apr 25. PMID: 18441048

Fu LY, van den Pol AN: Agouti-related peptide and MC3/4 receptor agonists both inhibit excitatory hypothalamic ventromedial nucleus neurons. J Neurosci. 2008 May 21. PMID: 18495877

Liao JB, Publicover J, Rose JK, DiMaio D: Single-dose, therapeutic vaccination of mice with vesicular stomatitis virus expressing human papillomavirus type 16 E7 protein. Clin Vaccine Immunol. 2008 May; 2008 Mar 12. PMID: 18337377

Thompson JM, Iwasaki A: Toll-like receptors regulation of viral infection and disease. Adv Drug Deliv Rev. 2008 Apr 29; 2007 Dec 28. PMID: 18280610

Rose NF, Publicover J, Chattopadhyay A, Rose JK: Hybrid alphavirus-rhabdovirus propagating replicon particles are versatile and potent vaccine vectors. Proc Natl Acad Sci U S A. 2008 Apr 15; 2008 Apr 7. PMID: 18391206

Toor N, Keating KS, Taylor SD, Pyle AM: Crystal structure of a self-spliced group II intron. Science. 2008 Apr 4. PMID: 18388288

Wilson SR, Wilson JH, Buonocore L, Palin A, Rose JK, Reuter JD: Intranasal immunization with recombinant vesicular stomatitis virus expressing murine cytomegalovirus glycoprotein B induces humoral and cellular immunity. Comp Med. 2008 Apr. PMID: 18524170

Kang SP, Taddei T, McLennan B, Lacy J: Pseudocirrhosis in a pancreatic cancer patient with liver metastases: a case report of complete resolution of pseudocirrhosis with an early recognition and management. World J Gastroenterol. 2008 Mar 14. PMID: 18330959

Li Y, van den Pol AN: Mu-opioid receptor-mediated depression of the hypothalamic hypocretin/orexin arousal system. J Neurosci. 2008 Mar 12. PMID: 18337411

Carmack S, Taddei T, Robert ME, Mistry P, Jain D: Increased T-cell sinusoidal lymphocytosis in liver biopsies in patients with chronic hepatitis C and mixed cryoglobulinemia. Am J Gastroenterol. 2008 Mar; 2007 Oct 26. PMID: 17970837

Ozduman K, Wollmann G, Piepmeier JM, van den Pol AN: Systemic vesicular stomatitis virus selectively destroys multifocal glioma and metastatic carcinoma in brain. J Neurosci. 2008 Feb 20. PMID: 18287505

Uchil PD, Quinlan BD, Chan WT, Luna JM, Mothes W: TRIM E3 ligases interfere with early and late stages of the retroviral life cycle. PLoS Pathog. 2008 Feb 8. PMID: 18248090

Braithwaite RS, Roberts MS, Chang CC, Goetz MB, Gibert CL, Rodriguez-Barradas MC, Shechter S, Schaefer A, Nucifora K, Koppenhaver R, Justice AC: Influence of alternative thresholds for initiating HIV treatment on quality-adjusted life expectancy: a decision model. Ann Intern Med. 2008 Feb 5. PMID: 18252681

Lee HK, Iwasaki A: Autophagy and antiviral immunity. Curr Opin Immunol. 2008 Feb; 2008 Feb 8. PMID: 18262399

Spanò S, Galán JE: A novel pathway for exotoxin delivery by an intracellular pathogen. Curr Opin Microbiol. 2008 Feb; 2008 Feb 20. PMID: 18243772

Spanò S, Ugalde JE, Galán JE: Delivery of a Salmonella Typhi exotoxin from a host intracellular compartment. Cell Host Microbe. 2008 Jan 17. PMID: 18191792

Waldsich C, Pyle AM: A kinetic intermediate that regulates proper folding of a group II intron RNA. J Mol Biol. 2008 Jan 11; 2007 Oct 24. PMID: 18022197

Xiong Y: From electron microscopy to X-ray crystallography: molecular-replacement case studies. Acta Crystallogr D Biol Crystallogr. 2008 Jan; 2007 Dec 5. PMID: 18094470

Pyle AM: Translocation and unwinding mechanisms of RNA and DNA helicases. Annu Rev Biophys. 2008. PMID: 18573084

Federman DG, Gordon KS, Goulet J, Kancir S, Levin W, Fultz SL, Justice AC: Does Clinical Inertia Vary According to Provider Type? Fed Pract. 2008. PMID: 22247610

Patel JC, Galán JE: Investigating the function of Rho family GTPases during Salmonella/host cell interactions. Methods Enzymol. 2008. PMID: 18374162

Psyrri A, DiMaio D: Human papillomavirus in cervical and head-and-neck cancer. Nat Clin Pract Oncol. 2008 Jan. PMID: 18097454

Zingler N, Solem A, Pyle AM: Protein-facilitated ribozyme folding and catalysis. Nucleic Acids Symp Ser (Oxf). 2008. PMID: 18776256

Watson RO, Galán JE: Campylobacter jejuni survives within epithelial cells by avoiding delivery to lysosomes. PLoS Pathog. 2008 Jan. PMID: 18225954

de Lencastre A, Pyle AM: Three essential and conserved regions of the group II intron are proximal to the 5'-splice site. RNA. 2008 Jan; 2007 Nov 26. PMID: 18039742

Vasudevan S, Tong Y, Steitz JA: Switching from repression to activation: microRNAs can up-regulate translation. Science. 2007 Dec 21; 2007 Nov 29. PMID: 18048652

Maru DS, Kozal MJ, Bruce RD, Springer SA, Altice FL: Directly administered antiretroviral therapy for HIV-infected drug users does not have an impact on antiretroviral resistance: results from a randomized controlled trial. J Acquir Immune Defic Syndr. 2007 Dec 15. PMID: 18193497

Cotmore SF, Gottlieb RL, Tattersall P: Replication initiator protein NS1 of the parvovirus minute virus of mice binds to modular divergent sites distributed throughout duplex viral DNA. J Virol. 2007 Dec; 2007 Sep 26. PMID: 17898054

Beran RK, Serebrov V, Pyle AM: The serine protease domain of hepatitis C viral NS3 activates RNA helicase activity by promoting the binding of RNA substrate. J Biol Chem. 2007 Nov 30; 2007 Oct 5. PMID: 17921146

Iijima N, Linehan MM, Saeland S, Iwasaki A: Vaginal epithelial dendritic cells renew from bone marrow precursors. Proc Natl Acad Sci U S A. 2007 Nov 27; 2007 Nov 15. PMID: 18006657

Braithwaite RS, Concato J, Chang CC, Roberts MS, Justice AC: A framework for tailoring clinical guidelines to comorbidity at the point of care. Arch Intern Med. 2007 Nov 26. PMID: 18039996

Paintsil E, Dutschman GE, Hu R, Grill SP, Lam W, Baba M, Tanaka H, Cheng YC: Intracellular metabolism and persistence of the anti-human immunodeficiency virus activity of 2',3'-didehydro-3'-deoxy-4'-ethynylthymidine, a novel thymidine analog. Antimicrob Agents Chemother. 2007 Nov; 2007 Aug 27. PMID: 17724147

Kozal MJ, Hullsiek KH, Macarthur RD, Berg-Wolf Mv, Peng G, Xiang Y, Baxter JD, Uy J, Telzak EE, Novak RM, Terry Beirn Community Programs for Clinical Research on AIDS (CPCRA).: The Incidence of HIV drug resistance and its impact on progression of HIV disease among antiretroviral-naïve participants started on three different antiretroviral therapy strategies. HIV Clin Trials. 2007 Nov-Dec. PMID: 18042501

Gandhi NR, Skanderson M, Gordon KS, Concato J, Justice AC: Delayed presentation for human immunodeficiency virus (HIV) care among veterans: a problem of access or screening? Med Care. 2007 Nov. PMID: 18049352

Friend K, Lovejoy AF, Steitz JA: U2 snRNP binds intronless histone pre-mRNAs to facilitate U7-snRNP-dependent 3' end formation. Mol Cell. 2007 Oct 26. PMID: 17964263

Huang H, van den Pol AN: Rapid direct excitation and long-lasting enhancement of NMDA response by group I metabotropic glutamate receptor activation of hypothalamic melanin-concentrating hormone neurons. J Neurosci. 2007 Oct 24. PMID: 17959799

Duggal M, Justice AC, Ananth G, Brandt C: Collection of socially sensitive data: A randomized study comparing the advantages and limitations of self administered questionnaire on computer vs. traditional paper based method. AMIA Annu Symp Proc. 2007 Oct 11; 2007 Oct 11. PMID: 18694046

Wadley LM, Keating KS, Duarte CM, Pyle AM: Evaluating and learning from RNA pseudotorsional space: quantitative validation of a reduced representation for RNA structure. J Mol Biol. 2007 Sep 28; 2007 Jun 27. PMID: 17707400

Schwartz JA, Buonocore L, Roberts A, Suguitan A Jr, Kobasa D, Kobinger G, Feldmann H, Subbarao K, Rose JK: Vesicular stomatitis virus vectors expressing avian influenza H5 HA induce cross-neutralizing antibodies and long-term protection. Virology. 2007 Sep 15; 2007 May 23. PMID: 17524441

Desai S, Kyriakides T, Holodniy M, Al-Salman J, Griffith B, Kozal M: Evolution of genotypic resistance algorithms and their impact on the interpretation of clinical trials: an OPTIMA trial substudy. HIV Clin Trials. 2007 Sep-Oct. PMID: 17956830

Lindenbach BD, Prágai BM, Montserret R, Beran RK, Pyle AM, Penin F, Rice CM: The C terminus of hepatitis C virus NS4A encodes an electrostatic switch that regulates NS5A hyperphosphorylation and viral replication. J Virol. 2007 Sep; 2007 Jun 20. PMID: 17581983

Lang T, Dalal S, Chikova A, DiMaio D, Sweasy JB: The E295K DNA polymerase beta gastric cancer-associated variant interferes with base excision repair and induces cellular transformation. Mol Cell Biol. 2007 Aug; 2007 May 25. PMID: 17526740

Braithwaite RS, Kozal MJ, Chang CC, Roberts MS, Fultz SL, Goetz MB, Gibert C, Rodriguez-Barradas M, Mole L, Justice AC: Adherence, virological and immunological outcomes for HIV-infected veterans starting combination antiretroviral therapies. AIDS. 2007 Jul 31. PMID: 17630553

Ptacek JB, Edwards AP, Freeman-Cook LL, DiMaio D: Packing contacts can mediate highly specific interactions between artificial transmembrane proteins and the PDGFbeta receptor. Proc Natl Acad Sci U S A. 2007 Jul 17; 2007 Jul 3. PMID: 17609376

Galán JE: SnapShot: effector proteins of type III secretion systems. Cell. 2007 Jul 13. PMID: 17632065

Iwasaki A: Role of autophagy in innate viral recognition. Autophagy. 2007 Jul-Aug; 2007 Jul 7. PMID: 17404496

Ho WS, van den Pol AN: Bystander attenuation of neuronal and astrocyte intercellular communication by murine cytomegalovirus infection of glia. J Virol. 2007 Jul; 2007 Apr 25. PMID: 17459923

Conrad NK, Shu MD, Uyhazi KE, Steitz JA: Mutational analysis of a viral RNA element that counteracts rapid RNA decay by interaction with the polyadenylate tail. Proc Natl Acad Sci U S A. 2007 Jun 19; 2007 Jun 11. PMID: 17563387

Lytle JR, Yario TA, Steitz JA: Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5' UTR as in the 3' UTR. Proc Natl Acad Sci U S A. 2007 Jun 5; 2007 May 29. PMID: 17535905

Crothers K, Goulet JL, Rodriguez-Barradas MC, Gibert CL, Butt AA, Braithwaite RS, Peck R, Justice AC: Decreased awareness of current smoking among health care providers of HIV-positive compared to HIV-negative veterans. J Gen Intern Med. 2007 Jun; 2007 Mar 1. PMID: 17503106

Brandsma JL, Shylankevich M, Su Y, Roberts A, Rose JK, Zelterman D, Buonocore L: Vesicular stomatitis virus-based therapeutic vaccination targeted to the E1, E2, E6, and E7 proteins of cottontail rabbit papillomavirus. J Virol. 2007 Jun; 2007 Mar 28. PMID: 17392369

Horner SM, DiMaio D: The DNA binding domain of a papillomavirus E2 protein programs a chimeric nuclease to cleave integrated human papillomavirus DNA in HeLa cervical carcinoma cells. J Virol. 2007 Jun; 2007 Mar 28. PMID: 17392356

Haghjoo E, Galán JE: Identification of a transcriptional regulator that controls intracellular gene expression in Salmonella Typhi. Mol Microbiol. 2007 Jun. PMID: 17555437

Ramsburg EA, Publicover JM, Coppock D, Rose JK: Requirement for CD4 T cell help in maintenance of memory CD8 T cell responses is epitope dependent. J Immunol. 2007 May 15. PMID: 17475864

Huang H, Acuna-Goycolea C, Li Y, Cheng HM, Obrietan K, van den Pol AN: Cannabinoids excite hypothalamic melanin-concentrating hormone but inhibit hypocretin/orexin neurons: implications for cannabinoid actions on food intake and cognitive arousal. J Neurosci. 2007 May 2. PMID: 17475795

Paglino J, Burnett E, Tattersall P: Exploring the contribution of distal P4 promoter elements to the oncoselectivity of Minute Virus of Mice. Virology. 2007 Apr 25; 2006 Dec 18. PMID: 17175002

Lomakin IB, Xiong Y, Steitz TA: The crystal structure of yeast fatty acid synthase, a cellular machine with eight active sites working together. Cell. 2007 Apr 20. PMID: 17448991

Watson RO, Novik V, Hofreuter D, Lara-Tejero M, Galán JE: A MyD88-deficient mouse model reveals a role for Nramp1 in Campylobacter jejuni infection. Infect Immun. 2007 Apr; 2006 Dec 28. PMID: 17194808

El-Guindy A, Heston L, Delecluse HJ, Miller G: Phosphoacceptor site S173 in the regulatory domain of Epstein-Barr Virus ZEBRA protein is required for lytic DNA replication but not for activation of viral early genes. J Virol. 2007 Apr; 2007 Jan 10. PMID: 17215287

Paintsil E, Andiman WA: Care and management of the infant of the HIV-1-infected mother. Semin Perinatol. 2007 Apr. PMID: 17462496

Vasudevan S, Steitz JA: AU-rich-element-mediated upregulation of translation by FXR1 and Argonaute 2. Cell. 2007 Mar 23. PMID: 17382880

Lee HK, Lund JM, Ramanathan B, Mizushima N, Iwasaki A: Autophagy-dependent viral recognition by plasmacytoid dendritic cells. Science. 2007 Mar 9; 2007 Feb 1. PMID: 17272685

Fedorova O, Waldsich C, Pyle AM: Group II intron folding under near-physiological conditions: collapsing to the near-native state. J Mol Biol. 2007 Mar 2; 2006 Dec 6. PMID: 17196976

Fu LY, van den Pol AN: GABA excitation in mouse hilar neuropeptide Y neurons. J Physiol. 2007 Mar 1; 2007 Jan 4. PMID: 17204505

Johung K, Goodwin EC, DiMaio D: Human papillomavirus E7 repression in cervical carcinoma cells initiates a transcriptional cascade driven by the retinoblastoma family, resulting in senescence. J Virol. 2007 Mar; 2006 Dec 20. PMID: 17182682

Sherer NM, Lehmann MJ, Jimenez-Soto LF, Horensavitz C, Pypaert M, Mothes W: Retroviruses can establish filopodial bridges for efficient cell-to-cell transmission. Nat Cell Biol. 2007 Mar; 2007 Feb 11. PMID: 17293854

Pyle AM, Fedorova O, Waldsich C: Folding of group II introns: a model system for large, multidomain RNAs? Trends Biochem Sci. 2007 Mar; 2007 Feb 7. PMID: 17289393

Bhaduri-McIntosh S, Landry ML, Nikiforow S, Rotenberg M, El-Guindy A, Miller G: Serum IgA antibodies to Epstein-Barr virus (EBV) early lytic antigens are present in primary EBV infection. J Infect Dis. 2007 Feb 15; 2007 Jan 10. PMID: 17230407

Iwasaki A: Division of labor by dendritic cells. Cell. 2007 Feb 9. PMID: 17289563

Paintsil E: Pediatric community-acquired methicillin-resistant Staphylococcus aureus infection and colonization: trends and management. Curr Opin Pediatr. 2007 Feb. PMID: 17224666

Simon ID, Publicover J, Rose JK: Replication and propagation of attenuated vesicular stomatitis virus vectors in vivo: vector spread correlates with induction of immune responses and persistence of genomic RNA. J Virol. 2007 Feb; 2006 Dec 6. PMID: 17151110

Wollmann G, Robek MD, van den Pol AN: Variable deficiencies in the interferon response enhance susceptibility to vesicular stomatitis virus oncolytic actions in glioblastoma cells but not in normal human glial cells. J Virol. 2007 Feb; 2006 Nov 15. PMID: 17108037

Lee HK, Iwasaki A: Innate control of adaptive immunity: dendritic cells and beyond. Semin Immunol. 2007 Feb; 2007 Feb 5. PMID: 17276695

Braithwaite RS, Roberts MS, Justice AC: Incorporating quality of evidence into decision analytic modeling. Ann Intern Med. 2007 Jan 16. PMID: 17227937

Brandsma JL, Shlyankevich M, Buonocore L, Roberts A, Becker SM, Rose JK: Therapeutic efficacy of vesicular stomatitis virus-based E6 vaccination in rabbits. Vaccine. 2007 Jan 8; 2006 Aug 22. PMID: 16962690

Palin A, Chattopadhyay A, Park S, Delmas G, Suresh R, Senina S, Perlin DS, Rose JK: An optimized vaccine vector based on recombinant vesicular stomatitis virus gives high-level, long-term protection against Yersinia pestis challenge. Vaccine. 2007 Jan 8; 2006 Aug 22. PMID: 16959385

Miller G, El-Guindy A, Countryman J, Ye J, Gradoville L: Lytic cycle switches of oncogenic human gammaherpesviruses. Adv Cancer Res. 2007. PMID: 17419942

Cotmore SF, Tattersall P: Parvoviral host range and cell entry mechanisms. Adv Virus Res. 2007. PMID: 17765706

Iwasaki A: Mucosal dendritic cells. Annu Rev Immunol. 2007. PMID: 17378762

Lataillade M, Chiarella J, Kozal MJ: Natural polymorphism of the HIV-1 integrase gene and mutations associated with integrase inhibitor resistance. Antivir Ther. 2007. PMID: 17668566

van den Pol AN, Robek MD, Ghosh PK, Ozduman K, Bandi P, Whim MD, Wollmann G: Cytomegalovirus induces interferon-stimulated gene expression and is attenuated by interferon in the developing brain. J Virol. 2007 Jan; 2006 Oct 25. PMID: 17065212

Goulet JL, Erdos J, Kancir S, Levin FL, Wright SM, Daniels SM, Nilan L, Justice AC: Measuring performance directly using the veterans health administration electronic medical record: a comparison with external peer review. Med Care. 2007 Jan. PMID: 17279023

Waldsich C, Pyle AM: A folding control element for tertiary collapse of a group II intron ribozyme. Nat Struct Mol Biol. 2007 Jan; 2006 Dec 3. PMID: 17143279

Wagner GP, Pyle AM: Tinkering with transcription factor proteins: the role of transcription factor adaptation in developmental evolution. Novartis Found Symp. 2007. PMID: 17710850

Conrad NK, Mili S, Marshall EL, Shu MD, Steitz JA: Identification of a rapid mammalian deadenylation-dependent decay pathway and its inhibition by a viral RNA element. Mol Cell. 2006 Dec 28. PMID: 17189195

Li Y, van den Pol AN: Differential target-dependent actions of coexpressed inhibitory dynorphin and excitatory hypocretin/orexin neuropeptides. J Neurosci. 2006 Dec 13. PMID: 17167093

Kamanaka M, Kim ST, Wan YY, Sutterwala FS, Lara-Tejero M, Galán JE, Harhaj E, Flavell RA: Expression of interleukin-10 in intestinal lymphocytes detected by an interleukin-10 reporter knockin tiger mouse. Immunity. 2006 Dec; 2006 Nov 30. PMID: 17137799

Lund JM, Linehan MM, Iijima N, Iwasaki A: Cutting Edge: Plasmacytoid dendritic cells provide innate immune protection against mucosal viral infection in situ. J Immunol. 2006 Dec 1. PMID: 17114418

Justice AC: Prioritizing primary care in HIV: comorbidity, toxicity, and demography. Top HIV Med. 2006 Dec-2007 Jan. PMID: 17237557

DiMaio D, Miller G: Thirty years into the genomics era: tumor viruses led the way. Yale J Biol Med. 2006 Dec. PMID: 17940630

Galán JE, Wolf-Watz H: Protein delivery into eukaryotic cells by type III secretion machines. Nature. 2006 Nov 30. PMID: 17136086

Harty TP, Dib-Hajj SD, Tyrrell L, Blackman R, Hisama FM, Rose JB, Waxman SG: Na(V)1.7 mutant A863P in erythromelalgia: effects of altered activation and steady-state inactivation on excitability of nociceptive dorsal root ganglion neurons. J Neurosci. 2006 Nov 29. PMID: 17135418

Solem A, Zingler N, Pyle AM: A DEAD protein that activates intron self-splicing without unwinding RNA. Mol Cell. 2006 Nov 17. PMID: 17188036

Sato A, Linehan MM, Iwasaki A: Dual recognition of herpes simplex viruses by TLR2 and TLR9 in dendritic cells. Proc Natl Acad Sci U S A. 2006 Nov 14; 2006 Nov 3. PMID: 17085599

Patel JC, Galán JE: Differential activation and function of Rho GTPases during Salmonella-host cell interactions. J Cell Biol. 2006 Nov 6; 2006 Oct 30. PMID: 17074883

Crothers K, Butt AA, Gibert CL, Rodriguez-Barradas MC, Crystal S, Justice AC, Veterans Aging Cohort 5 Project Team.: Increased COPD among HIV-positive compared to HIV-negative veterans. Chest. 2006 Nov. PMID: 17099007

Burnett E, Cotmore SF, Tattersall P: Segregation of a single outboard left-end origin is essential for the viability of parvovirus minute virus of mice. J Virol. 2006 Nov; 2006 Aug 23. PMID: 16928767

Chen LM, Briones G, Donis RO, Galán JE: Optimization of the delivery of heterologous proteins by the Salmonella enterica serovar Typhimurium type III secretion system for vaccine development. Infect Immun. 2006 Oct. PMID: 16988261

Czibener C, Sherer NM, Becker SM, Pypaert M, Hui E, Chapman ER, Mothes W, Andrews NW: Ca2+ and synaptotagmin VII-dependent delivery of lysosomal membrane to nascent phagosomes. J Cell Biol. 2006 Sep 25; 2006 Sep 18. PMID: 16982801

Heston L, El-Guindy A, Countryman J, Dela Cruz C, Delecluse HJ, Miller G: Amino acids in the basic domain of Epstein-Barr virus ZEBRA protein play distinct roles in DNA binding, activation of early lytic gene expression, and promotion of viral DNA replication. J Virol. 2006 Sep. PMID: 16940523

Hofreuter D, Tsai J, Watson RO, Novik V, Altman B, Benitez M, Clark C, Perbost C, Jarvie T, Du L, Galán JE: Unique features of a highly pathogenic Campylobacter jejuni strain. Infect Immun. 2006 Aug. PMID: 16861657

Shen H, Iwasaki A: A crucial role for plasmacytoid dendritic cells in antiviral protection by CpG ODN-based vaginal microbicide. J Clin Invest. 2006 Aug; 2006 Jul 27. PMID: 16878177

Justice AC, Erdos J, Brandt C, Conigliaro J, Tierney W, Bryant K: The Veterans Affairs Healthcare System: A unique laboratory for observational and interventional research. Med Care. 2006 Aug. PMID: 16849970

Lataillade M, Kozal MJ: The hunt for HIV-1 integrase inhibitors. AIDS Patient Care STDS. 2006 Jul. PMID: 16839248

Nishikawa H, Sato E, Briones G, Chen LM, Matsuo M, Nagata Y, Ritter G, Jäger E, Nomura H, Kondo S, Tawara I, Kato T, Shiku H, Old LJ, Galán JE, Gnjatic S: In vivo antigen delivery by a Salmonella typhimurium type III secretion system for therapeutic cancer vaccines. J Clin Invest. 2006 Jul; 2006 Jun 22. PMID: 16794737

Publicover J, Ramsburg E, Robek M, Rose JK: Rapid pathogenesis induced by a vesicular stomatitis virus matrix protein mutant: viral pathogenesis is linked to induction of tumor necrosis factor alpha. J Virol. 2006 Jul. PMID: 16809308

van den Pol AN: Viral infections in the developing and mature brain. Trends Neurosci. 2006 Jul; 2006 Jun 27. PMID: 16806513

Kozal MJ, Amico KR, Chiarella J, Cornman D, Fisher W, Fisher J, Friedland G: A population-based and longitudinal study of sexual behavior and multidrug-resistant HIV among patients in clinical care. MedGenMed. 2006 Jun 13; 2006 Jun 13. PMID: 16926811

Lara-Tejero M, Sutterwala FS, Ogura Y, Grant EP, Bertin J, Coyle AJ, Flavell RA, Galán JE: Role of the caspase-1 inflammasome in Salmonella typhimurium pathogenesis. J Exp Med. 2006 Jun 12; 2006 May 22. PMID: 16717117

Ruiz Z, D'Abramo A Jr, Tattersall P: Differential roles for the C-terminal hexapeptide domains of NS2 splice variants during MVM infection of murine cells. Virology. 2006 Jun 5; 2006 Feb 28. PMID: 16504232

Marlovits TC, Kubori T, Lara-Tejero M, Thomas D, Unger VM, Galán JE: Assembly of the inner rod determines needle length in the type III secretion injectisome. Nature. 2006 Jun 1. PMID: 16738660

Beran RK, Bruno MM, Bowers HA, Jankowsky E, Pyle AM: Robust translocation along a molecular monorail: the NS3 helicase from hepatitis C virus traverses unusually large disruptions in its track. J Mol Biol. 2006 May 12; 2006 Mar 20. PMID: 16569413

Fok V, Friend K, Steitz JA: Epstein-Barr virus noncoding RNAs are confined to the nucleus, whereas their partner, the human La protein, undergoes nucleocytoplasmic shuttling. J Cell Biol. 2006 May 8. PMID: 16682524

Czopik AK, Bynoe MS, Palm N, Raine CS, Medzhitov R: Semaphorin 7A is a negative regulator of T cell responses. Immunity. 2006 May. PMID: 16713976

Kwon HL, Ortiz B, Swaner R, Shoemaker K, Jean-Louis B, Northridge ME, Vaughan RD, Marx T, Goodman A, Borrell LN, Nicholas SW, Harlem Children's Zone Asthma Initiative.: Childhood asthma and extreme values of body mass index: the Harlem Children's Zone Asthma Initiative. J Urban Health. 2006 May. PMID: 16739045

Fok V, Mitton-Fry RM, Grech A, Steitz JA: Multiple domains of EBER 1, an Epstein-Barr virus noncoding RNA, recruit human ribosomal protein L22. RNA. 2006 May; 2006 Mar 23. PMID: 16556938

Paintsil E, Margolis A, Collins JA, Alexander L: The contribution of HIV fitness to the evolution pattern of reverse transcriptase inhibitor resistance. J Med Virol. 2006 Apr. PMID: 16482556

Kolev NG, Steitz JA: In vivo assembly of functional U7 snRNP requires RNA backbone flexibility within the Sm-binding site. Nat Struct Mol Biol. 2006 Apr; 2006 Mar 19. PMID: 16547514

Sutterwala FS, Ogura Y, Szczepanik M, Lara-Tejero M, Lichtenberger GS, Grant EP, Bertin J, Coyle AJ, Galán JE, Askenase PW, Flavell RA: Critical role for NALP3/CIAS1/Cryopyrin in innate and adaptive immunity through its regulation of caspase-1. Immunity. 2006 Mar. PMID: 16546100

Huang H, Ghosh P, van den Pol AN: Prefrontal cortex-projecting glutamatergic thalamic paraventricular nucleus-excited by hypocretin: a feedforward circuit that may enhance cognitive arousal. J Neurophysiol. 2006 Mar. PMID: 16492946

Okuma K, Boritz E, Walker J, Sarkar A, Alexander L, Rose JK: Recombinant vesicular stomatitis viruses encoding simian immunodeficiency virus receptors target infected cells and control infection. Virology. 2006 Mar 1; 2005 Dec 1. PMID: 16325218

El-Guindy AS, Paek SY, Countryman J, Miller G: Identification of constitutive phosphorylation sites on the Epstein-Barr virus ZEBRA protein. J Biol Chem. 2006 Feb 10; 2005 Dec 1. PMID: 16321978

Sweasy JB, Lang T, DiMaio D: Is base excision repair a tumor suppressor mechanism? Cell Cycle. 2006 Feb; 2006 Feb 14. PMID: 16418580

Xiong Y, Steitz TA: A story with a good ending: tRNA 3'-end maturation by CCA-adding enzymes. Curr Opin Struct Biol. 2006 Feb; 2005 Dec 20. PMID: 16364630

Briones G, Hofreuter D, Galán JE: Cre reporter system to monitor the translocation of type III secreted proteins into host cells. Infect Immun. 2006 Feb. PMID: 16428755

Vasudevan S, Seli E, Steitz JA: Metazoan oocyte and early embryo development program: a progression through translation regulatory cascades. Genes Dev. 2006 Jan 15. PMID: 16418480

DiMaio D, Liao JB: Human papillomaviruses and cervical cancer. Adv Virus Res. 2006. PMID: 16877060

Kozal MJ, Hullsiek KH, Leduc R, Novak RM, MacArthur RD, Lawrence J, Baxter JD, Terry Beirn Community Programs for Clinical Research on AIDS (CPCRA).: Prevalence and impact of HIV-1 protease codon 33 mutations and polymorphisms in treatment-naive and treatment-experienced patients. Antivir Ther. 2006. PMID: 16856619

Farr GA, Cotmore SF, Tattersall P: VP2 cleavage and the leucine ring at the base of the fivefold cylinder control pH-dependent externalization of both the VP1 N terminus and the genome of minute virus of mice. J Virol. 2006 Jan. PMID: 16352540

Iwasaki A: The use of bone marrow-chimeric mice in elucidating immune mechanisms. Methods Mol Med. 2006. PMID: 16988461

Crothers K, Griffith TA, McGinnis KA, Rodriguez-Barradas MC, Leaf DA, Weissman S, Gibert CL, Butt AA, Justice AC: The impact of cigarette smoking on mortality, quality of life, and comorbid illness among HIV-positive veterans. J Gen Intern Med. 2005 Dec. PMID: 16423106

Ramsburg E, Publicover J, Buonocore L, Poholek A, Robek M, Palin A, Rose JK: A vesicular stomatitis virus recombinant expressing granulocyte-macrophage colony-stimulating factor induces enhanced T-cell responses and is highly attenuated for replication in animals. J Virol. 2005 Dec. PMID: 16306575

Su LJ, Waldsich C, Pyle AM: An obligate intermediate along the slow folding pathway of a group II intron ribozyme. Nucleic Acids Res. 2005; 2005 Nov 27. PMID: 16314300

Farr GA, Zhang LG, Tattersall P: Parvoviral virions deploy a capsid-tethered lipolytic enzyme to breach the endosomal membrane during cell entry. Proc Natl Acad Sci U S A. 2005 Nov 22; 2005 Nov 11. PMID: 16284249

Freeman-Cook LL, Dimaio D: Modulation of cell function by small transmembrane proteins modeled on the bovine papillomavirus E5 protein. Oncogene. 2005 Nov 21. PMID: 16299535

Fedorova O, Pyle AM: Linking the group II intron catalytic domains: tertiary contacts and structural features of domain 3. EMBO J. 2005 Nov 16; 2005 Oct 27. PMID: 16252007

Acuna-Goycolea C, van den Pol AN: Peptide YY(3-36) inhibits both anorexigenic proopiomelanocortin and orexigenic neuropeptide Y neurons: implications for hypothalamic regulation of energy homeostasis. J Neurosci. 2005 Nov 9. PMID: 16280589

Soderberg KA, Payne GW, Sato A, Medzhitov R, Segal SS, Iwasaki A: Innate control of adaptive immunity via remodeling of lymph node feed arteriole. Proc Natl Acad Sci U S A. 2005 Nov 8; 2005 Oct 31. PMID: 16260739

Kolev NG, Steitz JA: Symplekin and multiple other polyadenylation factors participate in 3'-end maturation of histone mRNAs. Genes Dev. 2005 Nov 1; 2005 Oct 17. PMID: 16230528

Publicover J, Ramsburg E, Rose JK: A single-cycle vaccine vector based on vesicular stomatitis virus can induce immune responses comparable to those generated by a replication-competent vector. J Virol. 2005 Nov. PMID: 16227246

Patel JC, Rossanese OW, Galán JE: The functional interface between Salmonella and its host cell: opportunities for therapeutic intervention. Trends Pharmacol Sci. 2005 Nov; 2005 Sep 22. PMID: 16182381

Akeda Y, Galán JE: Chaperone release and unfolding of substrates in type III secretion. Nature. 2005 Oct 6. PMID: 16208377

Sweasy JB, Lang T, Starcevic D, Sun KW, Lai CC, Dimaio D, Dalal S: Expression of DNA polymerase {beta} cancer-associated variants in mouse cells results in cellular transformation. Proc Natl Acad Sci U S A. 2005 Oct 4; 2005 Sep 22. PMID: 16179390

Goulet JL, Fultz SL, McGinnis KA, Justice AC: Relative prevalence of comorbidities and treatment contraindications in HIV-mono-infected and HIV/HCV-co-infected veterans. AIDS. 2005 Oct. PMID: 16251836

Kapadia SU, Rose JK, Lamirande E, Vogel L, Subbarao K, Roberts A: Long-term protection from SARS coronavirus infection conferred by a single immunization with an attenuated VSV-based vaccine. Virology. 2005 Sep 30. PMID: 16043204

D'Abramo AM Jr, Ali AA, Wang F, Cotmore SF, Tattersall P: Host range mutants of Minute Virus of Mice with a single VP2 amino acid change require additional silent mutations that regulate NS2 accumulation. Virology. 2005 Sep 15. PMID: 16039688

Pyle AM: Capping by branching: a new ribozyme makes tiny lariats. Science. 2005 Sep 2. PMID: 16141065

Kozal MJ, Amico KR, Chiarella J, Cornman D, Fisher W, Fisher J, Friedland G: HIV drug resistance and HIV transmission risk behaviors among active injection drug users. J Acquir Immune Defic Syndr. 2005 Sep 1. PMID: 16123691

Wollmann G, Acuna-Goycolea C, van den Pol AN: Direct excitation of hypocretin/orexin cells by extracellular ATP at P2X receptors. J Neurophysiol. 2005 Sep; 2005 Jun 15. PMID: 15958604

Szewczak LB, Gabrielsen JS, Degregorio SJ, Strobel SA, Steitz JA: Molecular basis for RNA kink-turn recognition by the h15.5K small RNP protein. RNA. 2005 Sep. PMID: 16120832

Li W, Kamtekar S, Xiong Y, Sarkis GJ, Grindley ND, Steitz TA: Structure of a synaptic gammadelta resolvase tetramer covalently linked to two cleaved DNAs. Science. 2005 Aug 19; 2005 Jun 30. PMID: 15994378

Acuna-Goycolea C, Tamamaki N, Yanagawa Y, Obata K, van den Pol AN: Mechanisms of neuropeptide Y, peptide YY, and pancreatic polypeptide inhibition of identified green fluorescent protein-expressing GABA neurons in the hypothalamic neuroendocrine arcuate nucleus. J Neurosci. 2005 Aug 10. PMID: 16093392

Braithwaite RS, Justice AC, Chang CC, Fusco JS, Raffanti SR, Wong JB, Roberts MS: Estimating the proportion of patients infected with HIV who will die of comorbid diseases. Am J Med. 2005 Aug. PMID: 16084183

Reuter JD, Wilson JH, Idoko KE, van den Pol AN: CD4+ T-cell reconstitution reduces cytomegalovirus in the immunocompromised brain. J Virol. 2005 Aug. PMID: 16014915

Lehmann MJ, Sherer NM, Marks CB, Pypaert M, Mothes W: Actin- and myosin-driven movement of viruses along filopodia precedes their entry into cells. J Cell Biol. 2005 Jul 18. PMID: 16027225

Braithwaite RS, McGinnis KA, Conigliaro J, Maisto SA, Crystal S, Day N, Cook RL, Gordon A, Bridges MW, Seiler JF, Justice AC: A temporal and dose-response association between alcohol consumption and medication adherence among veterans in care. Alcohol Clin Exp Res. 2005 Jul. PMID: 16046874

Cotmore SF, Tattersall P: Encapsidation of minute virus of mice DNA: aspects of the translocation mechanism revealed by the structure of partially packaged genomes. Virology. 2005 May 25. PMID: 15866075

Cook HL, Lytle JR, Mischo HE, Li MJ, Rossi JJ, Silva DP, Desrosiers RC, Steitz JA: Small nuclear RNAs encoded by Herpesvirus saimiri upregulate the expression of genes linked to T cell activation in virally transformed T cells. Curr Biol. 2005 May 24. PMID: 15916956

Conrad NK, Steitz JA: A Kaposi's sarcoma virus RNA element that increases the nuclear abundance of intronless transcripts. EMBO J. 2005 May 18; 2005 Apr 28. PMID: 15861127

Watson RO, Galán JE: Signal transduction in Campylobacter jejuni-induced cytokine production. Cell Microbiol. 2005 May. PMID: 15839895

Wollmann G, Tattersall P, van den Pol AN: Targeting human glioblastoma cells: comparison of nine viruses with oncolytic potential. J Virol. 2005 May. PMID: 15857987

Huang Y, Steitz JA: SRprises along a messenger's journey. Mol Cell. 2005 Mar 4. PMID: 15749011

Galán JE: Bacterial toxins and the immune system: show me the in vivo targets. J Exp Med. 2005 Feb 7. PMID: 15699067

Patel JC, Galán JE: Manipulation of the host actin cytoskeleton by Salmonella--all in the name of entry. Curr Opin Microbiol. 2005 Feb. PMID: 15694851

Cotmore SF, Tattersall P: Genome packaging sense is controlled by the efficiency of the nick site in the right-end replication origin of parvoviruses minute virus of mice and LuIII. J Virol. 2005 Feb. PMID: 15681430

Lai CC, Edwards AP, DiMaio D: Productive interaction between transmembrane mutants of the bovine papillomavirus E5 protein and the platelet-derived growth factor beta receptor. J Virol. 2005 Feb. PMID: 15650217

Freeman-Cook LL, Edwards AP, Dixon AM, Yates KE, Ely L, Engelman DM, Dimaio D: Specific locations of hydrophilic amino acids in constructed transmembrane ligands of the platelet-derived growth factor beta receptor. J Mol Biol. 2005 Jan 28. PMID: 15588835

Seli E, Lalioti MD, Flaherty SM, Sakkas D, Terzi N, Steitz JA: An embryonic poly(A)-binding protein (ePAB) is expressed in mouse oocytes and early preimplantation embryos. Proc Natl Acad Sci U S A. 2005 Jan 11; 2005 Jan 3. PMID: 15630085

Li Y, van den Pol AN: Direct and indirect inhibition by catecholamines of hypocretin/orexin neurons. J Neurosci. 2005 Jan 5. PMID: 15634779

Hirose T, Shu MD, Steitz JA: Splicing of U12-type introns deposits an exon junction complex competent to induce nonsense-mediated mRNA decay. Proc Natl Acad Sci U S A. 2004 Dec 28; 2004 Dec 17. PMID: 15608055

Fleeton M, Contractor N, Leon F, He J, Wetzel D, Dermody T, Iwasaki A, Kelsall B: Involvement of dendritic cell subsets in the induction of oral tolerance and immunity. Ann N Y Acad Sci. 2004 Dec. PMID: 15681744

Tycowski KT, Aab A, Steitz JA: Guide RNAs with 5' caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa. Curr Biol. 2004 Nov 23. PMID: 15556860

Sato A, Iwasaki A: Induction of antiviral immunity requires Toll-like receptor signaling in both stromal and dendritic cell compartments. Proc Natl Acad Sci U S A. 2004 Nov 16; 2004 Nov 8. PMID: 15534227

Kozal MJ, Amico KR, Chiarella J, Schreibman T, Cornman D, Fisher W, Fisher J, Friedland G: Antiretroviral resistance and high-risk transmission behavior among HIV-positive patients in clinical care. AIDS. 2004 Nov 5. PMID: 15577652

Marlovits TC, Kubori T, Sukhan A, Thomas DR, Galán JE, Unger VM: Structural insights into the assembly of the type III secretion needle complex. Science. 2004 Nov 5. PMID: 15528446

Hueffer K, Galán JE: Salmonella-induced macrophage death: multiple mechanisms, different outcomes. Cell Microbiol. 2004 Nov. PMID: 15469431

Mili S, Steitz JA: Evidence for reassociation of RNA-binding proteins after cell lysis: implications for the interpretation of immunoprecipitation analyses. RNA. 2004 Nov; 2004 Sep 23. PMID: 15388877

Fu LY, Acuna-Goycolea C, van den Pol AN: Neuropeptide Y inhibits hypocretin/orexin neurons by multiple presynaptic and postsynaptic mechanisms: tonic depression of the hypothalamic arousal system. J Neurosci. 2004 Oct 6. PMID: 15470140

Iwasaki A, Medzhitov R: Toll-like receptor control of the adaptive immune responses. Nat Immunol. 2004 Oct. PMID: 15454922

Acuna-Goycolea C, van den Pol A: Glucagon-like peptide 1 excites hypocretin/orexin neurons by direct and indirect mechanisms: implications for viscera-mediated arousal. J Neurosci. 2004 Sep 15. PMID: 15371515

Publicover J, Ramsburg E, Rose JK: Characterization of nonpathogenic, live, viral vaccine vectors inducing potent cellular immune responses. J Virol. 2004 Sep. PMID: 15308726

Lara-Tejero M, Galán JE: A new twist in the hijacking of the actin-nucleating machinery. Mol Cell. 2004 Aug 27. PMID: 15327766

Xiong Y, Steitz TA: Mechanism of transfer RNA maturation by CCA-adding enzyme without using an oligonucleotide template. Nature. 2004 Aug 5. PMID: 15295590

Soderberg KA, Linehan MM, Ruddle NH, Iwasaki A: MAdCAM-1 expressing sacral lymph node in the lymphotoxin beta-deficient mouse provides a site for immune generation following vaginal herpes simplex virus-2 infection. J Immunol. 2004 Aug 1. PMID: 15265924

Serebrov V, Pyle AM: Periodic cycles of RNA unwinding and pausing by hepatitis C virus NS3 helicase. Nature. 2004 Jul 22. PMID: 15269774

El-Guindy AS, Miller G: Phosphorylation of Epstein-Barr virus ZEBRA protein at its casein kinase 2 sites mediates its ability to repress activation of a viral lytic cycle late gene by Rta. J Virol. 2004 Jul. PMID: 15220438

Huang Y, Yario TA, Steitz JA: A molecular link between SR protein dephosphorylation and mRNA export. Proc Natl Acad Sci U S A. 2004 Jun 29; 2004 Jun 21. PMID: 15210956

Hernandez LD, Hueffer K, Wenk MR, Galán JE: Salmonella modulates vesicular traffic by altering phosphoinositide metabolism. Science. 2004 Jun 18. PMID: 15205533

Farr GA, Tattersall P: A conserved leucine that constricts the pore through the capsid fivefold cylinder plays a central role in parvoviral infection. Virology. 2004 Jun 1. PMID: 15193920

van den Pol AN, Acuna-Goycolea C, Clark KR, Ghosh PK: Physiological properties of hypothalamic MCH neurons identified with selective expression of reporter gene after recombinant virus infection. Neuron. 2004 May 27. PMID: 15157424

Freeman-Cook LL, Dixon AM, Frank JB, Xia Y, Ely L, Gerstein M, Engelman DM, DiMaio D: Selection and characterization of small random transmembrane proteins that bind and activate the platelet-derived growth factor beta receptor. J Mol Biol. 2004 May 14. PMID: 15111056

Psyrri A, DeFilippis RA, Edwards AP, Yates KE, Manuelidis L, DiMaio D: Role of the retinoblastoma pathway in senescence triggered by repression of the human papillomavirus E7 protein in cervical carcinoma cells. Cancer Res. 2004 May 1. PMID: 15126344

Schlehuber LD, Rose JK: Prediction and identification of a permissive epitope insertion site in the vesicular stomatitis virus glycoprotein. J Virol. 2004 May. PMID: 15113889

Cook HL, Mischo HE, Steitz JA: The Herpesvirus saimiri small nuclear RNAs recruit AU-rich element-binding proteins but do not alter host AU-rich element-containing mRNA levels in virally transformed T cells. Mol Cell Biol. 2004 May. PMID: 15121869

Lund JM, Alexopoulou L, Sato A, Karow M, Adams NC, Gale NW, Iwasaki A, Flavell RA: Recognition of single-stranded RNA viruses by Toll-like receptor 7. Proc Natl Acad Sci U S A. 2004 Apr 13; 2004 Mar 19. PMID: 15034168

Wu M, Zaborszky L, Hajszan T, van den Pol AN, Alreja M: Hypocretin/orexin innervation and excitation of identified septohippocampal cholinergic neurons. J Neurosci. 2004 Apr 7. PMID: 15071100

Kozal M: Cross-resistance patterns among HIV protease inhibitors. AIDS Patient Care STDS. 2004 Apr. PMID: 15142350

Akeda Y, Galán JE: Genetic analysis of the Salmonella enterica type III secretion-associated ATPase InvC defines discrete functional domains. J Bacteriol. 2004 Apr. PMID: 15060043

Horner SM, DeFilippis RA, Manuelidis L, DiMaio D: Repression of the human papillomavirus E6 gene initiates p53-dependent, telomerase-independent senescence and apoptosis in HeLa cervical carcinoma cells. J Virol. 2004 Apr. PMID: 15047823

Ramsburg E, Rose NF, Marx PA, Mefford M, Nixon DF, Moretto WJ, Montefiori D, Earl P, Moss B, Rose JK: Highly effective control of an AIDS virus challenge in macaques by using vesicular stomatitis virus and modified vaccinia virus Ankara vaccine vectors in a single-boost protocol. J Virol. 2004 Apr. PMID: 15047809

Lytle JR, Steitz JA: Premature termination codons do not affect the rate of splicing of neighboring introns. RNA. 2004 Apr. PMID: 15037775

Rebane A, Aab A, Steitz JA: Transportins 1 and 2 are redundant nuclear import factors for hnRNP A1 and HuR. RNA. 2004 Apr. PMID: 15037768

Haghjoo E, Galán JE: Salmonella typhi encodes a functional cytolethal distending toxin that is delivered into host cells by a bacterial-internalization pathway. Proc Natl Acad Sci U S A. 2004 Mar 30. PMID: 15070766

Acuna-Goycolea C, Li Y, Van Den Pol AN: Group III metabotropic glutamate receptors maintain tonic inhibition of excitatory synaptic input to hypocretin/orexin neurons. J Neurosci. 2004 Mar 24. PMID: 15044540

Roberts A, Reuter JD, Wilson JH, Baldwin S, Rose JK: Complete protection from papillomavirus challenge after a single vaccination with a vesicular stomatitis virus vector expressing high levels of L1 protein. J Virol. 2004 Mar. PMID: 14990742

Linehan MM, Richman S, Krummenacher C, Eisenberg RJ, Cohen GH, Iwasaki A: In vivo role of nectin-1 in entry of herpes simplex virus type 1 (HSV-1) and HSV-2 through the vaginal mucosa. J Virol. 2004 Mar. PMID: 14963155

Scamborova P, Wong A, Steitz JA: An intronic enhancer regulates splicing of the twintron of Drosophila melanogaster prospero pre-mRNA by two different spliceosomes. Mol Cell Biol. 2004 Mar. PMID: 14966268

Dela Cruz CS, Lee Y, Viswanathan SR, El-Guindy AS, Gerlach J, Nikiforow S, Shedd D, Gradoville L, Miller G: N-linked glycosylation is required for optimal function of Kaposi's sarcoma herpesvirus-encoded, but not cellular, interleukin 6. J Exp Med. 2004 Feb 16. PMID: 14970177

McKinney JS, Zhang H, Kubori T, Galán JE, Altman S: Disruption of type III secretion in Salmonella enterica serovar Typhimurium by external guide sequences. Nucleic Acids Res. 2004; 2004 Feb 3. PMID: 14762212

Reuter JD, Gomez DL, Wilson JH, Van Den Pol AN: Systemic immune deficiency necessary for cytomegalovirus invasion of the mature brain. J Virol. 2004 Feb. PMID: 14722303

Palmer GA, Brogdon JL, Constant SL, Tattersall P: A nonproliferating parvovirus vaccine vector elicits sustained, protective humoral immunity following a single intravenous or intranasal inoculation. J Virol. 2004 Feb. PMID: 14722265

Justice AC, Stein DS, Fusco GP, Sherrill BH, Fusco JS, Danehower SC, Becker SL, Hansen NI, Graham NM, CHORUS Program Team.: Disease progression in HIV-infected patients treated with stavudine vs. zidovudine. J Clin Epidemiol. 2004 Jan. PMID: 15019015

Collins JA, Thompson MG, Paintsil E, Ricketts M, Gedzior J, Alexander L: Competitive fitness of nevirapine-resistant human immunodeficiency virus type 1 mutants. J Virol. 2004 Jan. PMID: 14694092

Lee SH, Galán JE: Salmonella type III secretion-associated chaperones confer secretion-pathway specificity. Mol Microbiol. 2004 Jan. PMID: 14756788

Hernandez LD, Pypaert M, Flavell RA, Galán JE: A Salmonella protein causes macrophage cell death by inducing autophagy. J Cell Biol. 2003 Dec 8. PMID: 14662750

Lee SH, Galán JE: InvB is a type III secretion-associated chaperone for the Salmonella enterica effector protein SopE. J Bacteriol. 2003 Dec. PMID: 14645290

Gao XB, Ghosh PK, van den Pol AN: Neurons synthesizing melanin-concentrating hormone identified by selective reporter gene expression after transfection in vitro: transmitter responses. J Neurophysiol. 2003 Dec; 2003 Oct 22. PMID: 14573562

Patel AA, Steitz JA: Splicing double: insights from the second spliceosome. Nat Rev Mol Cell Biol. 2003 Dec. PMID: 14685174

Iwasaki A: The role of dendritic cells in immune responses against vaginal infection by herpes simplex virus type 2. Microbes Infect. 2003 Nov. PMID: 14623018

Sherer NM, Lehmann MJ, Jimenez-Soto LF, Ingmundson A, Horner SM, Cicchetti G, Allen PG, Pypaert M, Cunningham JM, Mothes W: Visualization of retroviral replication in living cells reveals budding into multivesicular bodies. Traffic. 2003 Nov. PMID: 14617360

Kubori T, Galán JE: Temporal regulation of salmonella virulence effector function by proteasome-dependent protein degradation. Cell. 2003 Oct 31. PMID: 14636560

Zhao X, Sato A, Dela Cruz CS, Linehan M, Luegering A, Kucharzik T, Shirakawa AK, Marquez G, Farber JM, Williams I, Iwasaki A: CCL9 is secreted by the follicle-associated epithelium and recruits dome region Peyer's patch CD11b+ dendritic cells. J Immunol. 2003 Sep 15. PMID: 12960300

Lund J, Sato A, Akira S, Medzhitov R, Iwasaki A: Toll-like receptor 9-mediated recognition of Herpes simplex virus-2 by plasmacytoid dendritic cells. J Exp Med. 2003 Aug 4. PMID: 12900525

Rose JK: Optimization of transfection. Curr Protoc Cell Biol. 2003 Aug. PMID: 18228431

Burnett E, Tattersall P: Reverse genetic system for the analysis of parvovirus telomeres reveals interactions between transcription factor binding sites in the hairpin stem. J Virol. 2003 Aug. PMID: 12885883

Okuma K, Dalton KP, Buonocore L, Ramsburg E, Rose JK: Development of a novel surrogate virus for human T-cell leukemia virus type 1: inhibition of infection by osteoprotegerin. J Virol. 2003 Aug. PMID: 12857926

Iwasaki A: The importance of CD11b+ dendritic cells in CD4+ T cell activation in vivo: with help from interleukin 1. J Exp Med. 2003 Jul 21; 2003 Jul 14. PMID: 12860934

Fedorova O, Mitros T, Pyle AM: Domains 2 and 3 interact to form critical elements of the group II intron active site. J Mol Biol. 2003 Jul 4. PMID: 12823961

Steitz JA: Commentary: Bio2010--new challenges for biology educators. Cell Biol Educ. 2003 Summer. PMID: 12888841

Hirose T, Shu MD, Steitz JA: Splicing-dependent and -independent modes of assembly for intron-encoded box C/D snoRNPs in mammalian cells. Mol Cell. 2003 Jul. PMID: 12887897

Sukhan A, Kubori T, Galán JE: Synthesis and localization of the Salmonella SPI-1 type III secretion needle complex proteins PrgI and PrgJ. J Bacteriol. 2003 Jun. PMID: 12754250

Cotmore SF, Tattersall P: Resolution of parvovirus dimer junctions proceeds through a novel heterocruciform intermediate. J Virol. 2003 Jun. PMID: 12743281

Main ER, Xiong Y, Cocco MJ, D'Andrea L, Regan L: Design of stable alpha-helical arrays from an idealized TPR motif. Structure. 2003 May. PMID: 12737816

Adamidi C, Fedorova O, Pyle AM: A group II intron inserted into a bacterial heat-shock operon shows autocatalytic activity and unusual thermostability. Biochemistry. 2003 Apr 1. PMID: 12653544

van den Pol AN, Santarelli JG: Olfactory ensheathing cells: time lapse imaging of cellular interactions, axonal support, rapid morphologic shifts, and mitosis. J Comp Neurol. 2003 Mar 31. PMID: 12596257

Huang Y, Gattoni R, Stévenin J, Steitz JA: SR splicing factors serve as adapter proteins for TAP-dependent mRNA export. Mol Cell. 2003 Mar. PMID: 12667464

McConnell TS, Lokken RP, Steitz JA: Assembly of the U1 snRNP involves interactions with the backbone of the terminal stem of U1 snRNA. RNA. 2003 Feb. PMID: 12554862

Zhao X, Deak E, Soderberg K, Linehan M, Spezzano D, Zhu J, Knipe DM, Iwasaki A: Vaginal submucosal dendritic cells, but not Langerhans cells, induce protective Th1 responses to herpes simplex virus-2. J Exp Med. 2003 Jan 20. PMID: 12538655

DeFilippis RA, Goodwin EC, Wu L, DiMaio D: Endogenous human papillomavirus E6 and E7 proteins differentially regulate proliferation, senescence, and apoptosis in HeLa cervical carcinoma cells. J Virol. 2003 Jan. PMID: 12502868

Li Y, Gao XB, Sakurai T, van den Pol AN: Hypocretin/Orexin excites hypocretin neurons via a local glutamate neuron-A potential mechanism for orchestrating the hypothalamic arousal system. Neuron. 2002 Dec 19. PMID: 12495630

Carlyon JA, Chan WT, Galán J, Roos D, Fikrig E: Repression of rac2 mRNA expression by Anaplasma phagocytophila is essential to the inhibition of superoxide production and bacterial proliferation. J Immunol. 2002 Dec 15. PMID: 12471136

Li F, Xiong Y, Wang J, Cho HD, Tomita K, Weiner AM, Steitz TA: Crystal structures of the Bacillus stearothermophilus CCA-adding enzyme and its complexes with ATP or CTP. Cell. 2002 Dec 13. PMID: 12526808

McKinney J, Guerrier-Takada C, Galán J, Altman S: Tightly regulated gene expression system in Salmonella enterica serovar Typhimurium. J Bacteriol. 2002 Nov. PMID: 12374840

Liu RJ, van den Pol AN, Aghajanian GK: Hypocretins (orexins) regulate serotonin neurons in the dorsal raphe nucleus by excitatory direct and inhibitory indirect actions. J Neurosci. 2002 Nov 1. PMID: 12417670

El-Guindy AS, Heston L, Endo Y, Cho MS, Miller G: Disruption of Epstein-Barr virus latency in the absence of phosphorylation of ZEBRA by protein kinase C. J Virol. 2002 Nov. PMID: 12388679

Irusta PM, Luo Y, Bakht O, Lai CC, Smith SO, DiMaio D: Definition of an inhibitory juxtamembrane WW-like domain in the platelet-derived growth factor beta receptor. J Biol Chem. 2002 Oct 11; 2002 Aug 13. PMID: 12181311

Kubori T, Galán JE: Salmonella type III secretion-associated protein InvE controls translocation of effector proteins into host cells. J Bacteriol. 2002 Sep. PMID: 12169593

Iwasaki A, Welker R, Mueller S, Linehan M, Nomoto A, Wimmer E: Immunofluorescence analysis of poliovirus receptor expression in Peyer's patches of humans, primates, and CD155 transgenic mice: implications for poliovirus infection. J Infect Dis. 2002 Sep 1; 2002 Aug 9. PMID: 12195344

Wu M, Zhang Z, Leranth C, Xu C, van den Pol AN, Alreja M: Hypocretin increases impulse flow in the septohippocampal GABAergic pathway: implications for arousal via a mechanism of hippocampal disinhibition. J Neurosci. 2002 Sep 1. PMID: 12196599

Reuter JD, Vivas-Gonzalez BE, Gomez D, Wilson JH, Brandsma JL, Greenstone HL, Rose JK, Roberts A: Intranasal vaccination with a recombinant vesicular stomatitis virus expressing cottontail rabbit papillomavirus L1 protein provides complete protection against papillomavirus-induced disease. J Virol. 2002 Sep. PMID: 12163609

van den Pol AN, Reuter JD, Santarelli JG: Enhanced cytomegalovirus infection of developing brain independent of the adaptive immune system. J Virol. 2002 Sep. PMID: 12163604

Galán JE: The cell biology of microbial infections: coming of age. J Cell Biol. 2002 Aug 5; 2002 Aug 5. PMID: 12163462

Haglund K, Leiner I, Kerksiek K, Buonocore L, Pamer E, Rose JK: Robust recall and long-term memory T-cell responses induced by prime-boost regimens with heterologous live viral vectors expressing human immunodeficiency virus type 1 Gag and Env proteins. J Virol. 2002 Aug. PMID: 12097563

Kobayashi K, Hernandez LD, Galán JE, Janeway CA Jr, Medzhitov R, Flavell RA: IRAK-M is a negative regulator of Toll-like receptor signaling. Cell. 2002 Jul 26. PMID: 12150927

Cahill NM, Friend K, Speckmann W, Li ZH, Terns RM, Terns MP, Steitz JA: Site-specific cross-linking analyses reveal an asymmetric protein distribution for a box C/D snoRNP. EMBO J. 2002 Jul 15. PMID: 12110593

Patel AA, McCarthy M, Steitz JA: The splicing of U12-type introns can be a rate-limiting step in gene expression. EMBO J. 2002 Jul 15. PMID: 12110592

Gao XB, van den Pol AN: Melanin-concentrating hormone depresses L-, N-, and P/Q-type voltage-dependent calcium channels in rat lateral hypothalamic neurons. J Physiol. 2002 Jul 1. PMID: 12096069

Buonocore L, Blight KJ, Rice CM, Rose JK: Characterization of vesicular stomatitis virus recombinants that express and incorporate high levels of hepatitis C virus glycoproteins. J Virol. 2002 Jul. PMID: 12072487

Gradoville L, Kwa D, El-Guindy A, Miller G: Protein kinase C-independent activation of the Epstein-Barr virus lytic cycle. J Virol. 2002 Jun. PMID: 11991990

van den Pol AN, Ghosh PK, Liu RJ, Li Y, Aghajanian GK, Gao XB: Hypocretin (orexin) enhances neuron activity and cell synchrony in developing mouse GFP-expressing locus coeruleus. J Physiol. 2002 May 15. PMID: 12015428

Quiñones-Kochs MI, Buonocore L, Rose JK: Role of N-linked glycans in a human immunodeficiency virus envelope glycoprotein: effects on protein function and the neutralizing antibody response. J Virol. 2002 May. PMID: 11932385

McConnell TS, Cho SJ, Frilander MJ, Steitz JA: Branchpoint selection in the splicing of U12-dependent introns in vitro. RNA. 2002 May. PMID: 12022225

Kobayashi K, Inohara N, Hernandez LD, Galán JE, Núñez G, Janeway CA, Medzhitov R, Flavell RA: RICK/Rip2/CARDIAK mediates signalling for receptors of the innate and adaptive immune systems. Nature. 2002 Mar 14. PMID: 11894098

Hughes EA, Galán JE: Immune response to Salmonella: location, location, location? Immunity. 2002 Mar. PMID: 11911817

Haglund K, Leiner I, Kerksiek K, Buonocore L, Pamer E, Rose JK: High-level primary CD8(+) T-cell response to human immunodeficiency virus type 1 gag and env generated by vaccination with recombinant vesicular stomatitis viruses. J Virol. 2002 Mar. PMID: 11861840

Lara-Tejero M, Galán JE: Cytolethal distending toxin: limited damage as a strategy to modulate cellular functions. Trends Microbiol. 2002 Mar. PMID: 11864825

Jameson B, Baribaud F, Pöhlmann S, Ghavimi D, Mortari F, Doms RW, Iwasaki A: Expression of DC-SIGN by dendritic cells of intestinal and genital mucosae in humans and rhesus macaques. J Virol. 2002 Feb. PMID: 11799181

van den Pol AN, Dalton KP, Rose JK: Relative neurotropism of a recombinant rhabdovirus expressing a green fluorescent envelope glycoprotein. J Virol. 2002 Feb. PMID: 11773406

Otake LR, Scamborova P, Hashimoto C, Steitz JA: The divergent U12-type spliceosome is required for pre-mRNA splicing and is essential for development in Drosophila. Mol Cell. 2002 Feb. PMID: 11864616